RNA–Protein interactions for RNA: ENSMUST00000105454.2

Col13a1-205, Transcript of Collagen alpha-1(XIII) chain, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Col13a1, Length 3,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col13a1-205ENSMUST00000105454 NischQ80TM9 1593 aa29.23■■■□□ 2.27
Col13a1-205ENSMUST00000105454 Abcc9P70170 1546 aa28.24■■■□□ 2.11
Col13a1-205ENSMUST00000105454 Gm35339A0A140LHH9 1649 aa28.16■■■□□ 2.1
Col13a1-205ENSMUST00000105454 Rhox8Q6VSS7 320 aa27.98■■■□□ 2.07
Col13a1-205ENSMUST00000105454 Abcc8B2RUS7 1588 aa27.62■■■□□ 2.01
Col13a1-205ENSMUST00000105454 Rtl1Q7M732 1744 aa26.59■■□□□ 1.85
Col13a1-205ENSMUST00000105454 Ccdc180J3QNE4 1664 aa26.37■■□□□ 1.81
Col13a1-205ENSMUST00000105454 Ccdc136Q3TVA9 1136 aa25.97■■□□□ 1.75
Col13a1-205ENSMUST00000105454 Zcchc6Q5BLK4 1491 aaKnown RBP25.94■■□□□ 1.74
Col13a1-205ENSMUST00000105454 Ehmt2Q9Z148 1263 aaKnown RBP25.8■■□□□ 1.72
Col13a1-205ENSMUST00000105454 ScribQ80U72 1612 aa25.69■■□□□ 1.7
Col13a1-205ENSMUST00000105454 Rb1cc1Q9ESK9 1588 aa25.63■■□□□ 1.69
Col13a1-205ENSMUST00000105454 Dcaf1Q80TR8 1506 aa25.47■■□□□ 1.67
Col13a1-205ENSMUST00000105454 Rpgrip1Q9EPQ2 1331 aa25.35■■□□□ 1.65
Col13a1-205ENSMUST00000105454 HrcG5E8J6 738 aa25.33■■□□□ 1.65
Col13a1-205ENSMUST00000105454 Kdm5dQ62240 1548 aa25.33■■□□□ 1.64
Col13a1-205ENSMUST00000105454 Trim41Q5NCC3 630 aa25.23■■□□□ 1.63
Col13a1-205ENSMUST00000105454 Baz1aO88379 1555 aa25.22■■□□□ 1.63
Col13a1-205ENSMUST00000105454 Acin1Q9JIX8 1338 aaKnown RBP25.21■■□□□ 1.63
Col13a1-205ENSMUST00000105454 NacadQ5SWP3 1504 aa24.99■■□□□ 1.59
Col13a1-205ENSMUST00000105454 Cngb1E1AZ71 1325 aa24.77■■□□□ 1.56
Col13a1-205ENSMUST00000105454 Gab3Q8BSM5 595 aa24.69■■□□□ 1.54
Col13a1-205ENSMUST00000105454 Smarca2Q6DIC0 1577 aa24.64■■□□□ 1.54
Col13a1-205ENSMUST00000105454 Chic1Q8CBW7 227 aa24.57■■□□□ 1.52
Col13a1-205ENSMUST00000105454 Cep164Q5DU05 1446 aa24.54■■□□□ 1.52
Col13a1-205ENSMUST00000105454 Crybg2B7ZCC2 1516 aa24.45■■□□□ 1.5
Col13a1-205ENSMUST00000105454 Sycp2Q9CUU3 1500 aa24.45■■□□□ 1.5
Col13a1-205ENSMUST00000105454 Pcgf6Q99NA9 353 aa24.41■■□□□ 1.5
Col13a1-205ENSMUST00000105454 Rsf1E9PWW9 1441 aaKnown RBP24.38■■□□□ 1.49
Col13a1-205ENSMUST00000105454 Cecr2E9Q2Z1 1453 aa24.34■■□□□ 1.49
Col13a1-205ENSMUST00000105454 Esf1Q3V1V3 845 aaKnown RBP24.29■■□□□ 1.48
Col13a1-205ENSMUST00000105454 Brd4Q9ESU6 1400 aaKnown RBP24.22■■□□□ 1.47
Col13a1-205ENSMUST00000105454 Ccdc88bQ4QRL3 1481 aa24.21■■□□□ 1.47
Col13a1-205ENSMUST00000105454 Supt5hO55201 1082 aaKnown RBP24.13■■□□□ 1.45
Col13a1-205ENSMUST00000105454 Golga3P55937 1487 aa24.06■■□□□ 1.44
Col13a1-205ENSMUST00000105454 Synj1Q8CHC4 1574 aa24.05■■□□□ 1.44
Col13a1-205ENSMUST00000105454 Zeb1Q64318 1117 aa24.04■■□□□ 1.44
Col13a1-205ENSMUST00000105454 BicraF8VPZ9 1578 aa23.94■■□□□ 1.42
Col13a1-205ENSMUST00000105454 Mier1Q5UAK0 511 aa23.91■■□□□ 1.42
Col13a1-205ENSMUST00000105454 CftrP26361 1476 aa23.85■■□□□ 1.41
Col13a1-205ENSMUST00000105454 UbtfP25976 765 aaKnown RBP23.75■■□□□ 1.39
Col13a1-205ENSMUST00000105454 Myt1lP97500 1187 aa23.74■■□□□ 1.39
Col13a1-205ENSMUST00000105454 NefmP08553 848 aa23.62■■□□□ 1.37
Col13a1-205ENSMUST00000105454 Cc2d2aQ8CFW7 1633 aa23.54■■□□□ 1.36
Col13a1-205ENSMUST00000105454 Top2bQ64511 1612 aa23.54■■□□□ 1.36
Col13a1-205ENSMUST00000105454 Cttnbp2B9EJA2 1648 aa23.53■■□□□ 1.36
Col13a1-205ENSMUST00000105454 Npm2Q80W85 207 aa23.51■■□□□ 1.35
Col13a1-205ENSMUST00000105454 Sall2Q9QX96 1004 aa23.48■■□□□ 1.35
Col13a1-205ENSMUST00000105454 Neurod1Q60867 357 aa23.45■■□□□ 1.34
Col13a1-205ENSMUST00000105454 Smarca4Q3TKT4 1613 aaKnown RBP23.44■■□□□ 1.34
Col13a1-205ENSMUST00000105454 Wdr66E9Q743 1299 aa23.36■■□□□ 1.33
Col13a1-205ENSMUST00000105454 Ppargc1bQ8VHJ7 1014 aa23.36■■□□□ 1.33
Col13a1-205ENSMUST00000105454 Rapgef2Q8CHG7 1496 aa23.33■■□□□ 1.32
Col13a1-205ENSMUST00000105454 Plekhg3Q4VAC9 1341 aa23.31■■□□□ 1.32
Col13a1-205ENSMUST00000105454 Fmn1Q05860 1466 aa23.3■■□□□ 1.32
Col13a1-205ENSMUST00000105454 Cep162Q6ZQ06 1403 aa23.27■■□□□ 1.32
Col13a1-205ENSMUST00000105454 Il27Q8K3I6 234 aa23.24■■□□□ 1.31
Col13a1-205ENSMUST00000105454 Aebp2Q9Z248 504 aaKnown RBP23.24■■□□□ 1.31
Col13a1-205ENSMUST00000105454 Las1lA2BE28 776 aaKnown RBP23.21■■□□□ 1.31
Col13a1-205ENSMUST00000105454 Top2aQ01320 1528 aaKnown RBP23.2■■□□□ 1.31
Col13a1-205ENSMUST00000105454 Iqgap2Q3UQ44 1575 aa23.17■■□□□ 1.3
Col13a1-205ENSMUST00000105454 Ap3b1Q9Z1T1 1105 aa23.14■■□□□ 1.3
Col13a1-205ENSMUST00000105454 Clip1Q922J3 1391 aa23.13■■□□□ 1.29
Col13a1-205ENSMUST00000105454 Atad2bE9Q166 1460 aaKnown RBP22.97■■□□□ 1.27
Col13a1-205ENSMUST00000105454 TonslQ6NZL6 1363 aa22.94■■□□□ 1.26
Col13a1-205ENSMUST00000105454 PtprkP35822 1457 aa22.88■■□□□ 1.25
Col13a1-205ENSMUST00000105454 Eid3Q3V124 375 aa22.88■■□□□ 1.25
Col13a1-205ENSMUST00000105454 ClspnQ80YR7 1315 aa22.84■■□□□ 1.25
Col13a1-205ENSMUST00000105454 Kif15Q6P9L6 1387 aa22.82■■□□□ 1.24
Col13a1-205ENSMUST00000105454 Pds5bQ4VA53 1446 aaKnown RBP22.82■■□□□ 1.24
Col13a1-205ENSMUST00000105454 Arhgap35Q91YM2 1499 aa22.79■■□□□ 1.24
Col13a1-205ENSMUST00000105454 Nop58Q6DFW4 536 aaKnown RBP22.78■■□□□ 1.24
Col13a1-205ENSMUST00000105454 Frmpd1A2AKB4 1549 aa22.75■■□□□ 1.23
Col13a1-205ENSMUST00000105454 Cdk11bP24788 784 aaKnown RBP22.75■■□□□ 1.23
Col13a1-205ENSMUST00000105454 Csrnp3P59055 597 aa22.74■■□□□ 1.23
Col13a1-205ENSMUST00000105454 Setd5Q5XJV7 1441 aa22.72■■□□□ 1.23
Col13a1-205ENSMUST00000105454 Eif4g1Q6NZJ6 1600 aaKnown RBP22.71■■□□□ 1.23
Col13a1-205ENSMUST00000105454 Eea1Q8BL66 1411 aa22.69■■□□□ 1.22
Col13a1-205ENSMUST00000105454 Anks4bQ8K3X6 423 aa22.69■■□□□ 1.22
Col13a1-205ENSMUST00000105454 Arap1Q4LDD4 1452 aa22.68■■□□□ 1.22
Col13a1-205ENSMUST00000105454 Ncapd3Q6ZQK0 1506 aa22.68■■□□□ 1.22
Col13a1-205ENSMUST00000105454 TnnQ80Z71 1560 aa22.66■■□□□ 1.22
Col13a1-205ENSMUST00000105454 Lmod2Q3UHZ5 550 aa22.64■■□□□ 1.21
Col13a1-205ENSMUST00000105454 Wdr62Q3U3T8 1523 aa22.61■■□□□ 1.21
Col13a1-205ENSMUST00000105454 Fam50aQ9WV03 339 aaKnown RBP22.59■■□□□ 1.21
Col13a1-205ENSMUST00000105454 NrkQ9R0G8 1455 aa22.57■■□□□ 1.2
Col13a1-205ENSMUST00000105454 Mapk8ip2Q9ERE9 830 aa22.56■■□□□ 1.2
Col13a1-205ENSMUST00000105454 BlmO88700 1416 aa22.53■■□□□ 1.2
Col13a1-205ENSMUST00000105454 Shroom4Q1W617 1475 aa22.52■■□□□ 1.2
Col13a1-205ENSMUST00000105454 1700123L14RikQ3V2K7 440 aa22.52■■□□□ 1.2
Col13a1-205ENSMUST00000105454 Ercc6F8VPZ5 1481 aa22.52■■□□□ 1.2
Col13a1-205ENSMUST00000105454 Lamc3Q9R0B6 1581 aa22.51■■□□□ 1.19
Col13a1-205ENSMUST00000105454 Gm38655A0A286YDK6 273 aa22.48■■□□□ 1.19
Col13a1-205ENSMUST00000105454 Arhgef5E9Q7D5 1581 aa22.47■■□□□ 1.19
Col13a1-205ENSMUST00000105454 Camsap1A2AHC3 1581 aa22.46■■□□□ 1.19
Col13a1-205ENSMUST00000105454 Baz1bQ9Z277 1479 aa22.46■■□□□ 1.19
Col13a1-205ENSMUST00000105454 AqrQ8CFQ3 1481 aaKnown RBP22.44■■□□□ 1.18
Col13a1-205ENSMUST00000105454 Npm1Q61937 292 aaKnown RBP22.43■■□□□ 1.18
Col13a1-205ENSMUST00000105454 Ccdc18Q640L5 1455 aa22.43■■□□□ 1.18
Col13a1-205ENSMUST00000105454 Ubl4bQ9CQ84 188 aa22.41■■□□□ 1.18
Retrieved 100 of 22,080 RNA–protein pairs in 81.6 ms