RNA–Protein interactions for RNA: ENSMUST00000103627.2

Trav4n-4-201, Transcript of T cell receptor alpha variable 4D-4 (Fragment), mousemouse

APPRIS P1 BASIC

Gene Trav4n-4, Length 354 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4n-4-201ENSMUST00000103627 Gm35339A0A140LHH9 1649 aa29.55■■■□□ 2.32
Trav4n-4-201ENSMUST00000103627 NischQ80TM9 1593 aa29.02■■■□□ 2.24
Trav4n-4-201ENSMUST00000103627 Abcc8B2RUS7 1588 aa28.15■■■□□ 2.1
Trav4n-4-201ENSMUST00000103627 Abcc9P70170 1546 aa28.05■■■□□ 2.08
Trav4n-4-201ENSMUST00000103627 ScribQ80U72 1612 aa27.4■■□□□ 1.98
Trav4n-4-201ENSMUST00000103627 NacadQ5SWP3 1504 aa26.45■■□□□ 1.83
Trav4n-4-201ENSMUST00000103627 Kdm5dQ62240 1548 aa26.4■■□□□ 1.82
Trav4n-4-201ENSMUST00000103627 Sycp2Q9CUU3 1500 aa25.95■■□□□ 1.74
Trav4n-4-201ENSMUST00000103627 Dcaf1Q80TR8 1506 aa25.81■■□□□ 1.72
Trav4n-4-201ENSMUST00000103627 BicraF8VPZ9 1578 aa25.66■■□□□ 1.7
Trav4n-4-201ENSMUST00000103627 Dnajc5bQ9CQ94 199 aa25.49■■□□□ 1.67
Trav4n-4-201ENSMUST00000103627 Rb1cc1Q9ESK9 1588 aa25.3■■□□□ 1.64
Trav4n-4-201ENSMUST00000103627 Pds5bQ4VA53 1446 aaKnown RBP25.02■■□□□ 1.6
Trav4n-4-201ENSMUST00000103627 Thoc2B1AZI6 1594 aaKnown RBP24.97■■□□□ 1.59
Trav4n-4-201ENSMUST00000103627 Baz1aO88379 1555 aa24.88■■□□□ 1.57
Trav4n-4-201ENSMUST00000103627 Ccdc180J3QNE4 1664 aa24.78■■□□□ 1.56
Trav4n-4-201ENSMUST00000103627 Crybg2B7ZCC2 1516 aa24.76■■□□□ 1.55
Trav4n-4-201ENSMUST00000103627 Rhox8Q6VSS7 320 aa24.76■■□□□ 1.55
Trav4n-4-201ENSMUST00000103627 Atad2bE9Q166 1460 aaKnown RBP24.7■■□□□ 1.54
Trav4n-4-201ENSMUST00000103627 Zcchc6Q5BLK4 1491 aaKnown RBP24.63■■□□□ 1.53
Trav4n-4-201ENSMUST00000103627 Cc2d2aQ8CFW7 1633 aa24.57■■□□□ 1.52
Trav4n-4-201ENSMUST00000103627 Ercc6F8VPZ5 1481 aa24.53■■□□□ 1.52
Trav4n-4-201ENSMUST00000103627 Smarca2Q6DIC0 1577 aa24.4■■□□□ 1.5
Trav4n-4-201ENSMUST00000103627 Smarca4Q3TKT4 1613 aaKnown RBP24.39■■□□□ 1.49
Trav4n-4-201ENSMUST00000103627 Fam135aQ6NS59 1506 aa24.32■■□□□ 1.48
Trav4n-4-201ENSMUST00000103627 Iqgap2Q3UQ44 1575 aa24.31■■□□□ 1.48
Trav4n-4-201ENSMUST00000103627 Cecr2E9Q2Z1 1453 aa24.19■■□□□ 1.46
Trav4n-4-201ENSMUST00000103627 Wdr62Q3U3T8 1523 aa24.15■■□□□ 1.46
Trav4n-4-201ENSMUST00000103627 Frmpd1A2AKB4 1549 aa24.1■■□□□ 1.45
Trav4n-4-201ENSMUST00000103627 Phldb1Q6PDH0 1371 aaKnown RBP24.04■■□□□ 1.44
Trav4n-4-201ENSMUST00000103627 Baz1bQ9Z277 1479 aa23.99■■□□□ 1.43
Trav4n-4-201ENSMUST00000103627 Ubl4bQ9CQ84 188 aa23.85■■□□□ 1.41
Trav4n-4-201ENSMUST00000103627 Unc13aQ4KUS2 1712 aa23.8■■□□□ 1.4
Trav4n-4-201ENSMUST00000103627 Mrc2Q64449 1479 aa23.76■■□□□ 1.39
Trav4n-4-201ENSMUST00000103627 Cttnbp2B9EJA2 1648 aa23.59■■□□□ 1.37
Trav4n-4-201ENSMUST00000103627 CftrP26361 1476 aa23.57■■□□□ 1.36
Trav4n-4-201ENSMUST00000103627 Synj1Q8CHC4 1574 aa23.51■■□□□ 1.35
Trav4n-4-201ENSMUST00000103627 Rtl1Q7M732 1744 aa23.47■■□□□ 1.35
Trav4n-4-201ENSMUST00000103627 Dnajc5P60904 198 aa23.42■■□□□ 1.34
Trav4n-4-201ENSMUST00000103627 Trim41Q5NCC3 630 aa23.42■■□□□ 1.34
Trav4n-4-201ENSMUST00000103627 Brd4Q9ESU6 1400 aaKnown RBP23.41■■□□□ 1.34
Trav4n-4-201ENSMUST00000103627 Lrriq1Q0P5X1 1673 aa23.29■■□□□ 1.32
Trav4n-4-201ENSMUST00000103627 Ccdc136Q3TVA9 1136 aa23.22■■□□□ 1.31
Trav4n-4-201ENSMUST00000103627 Cux2P70298 1426 aa23.21■■□□□ 1.31
Trav4n-4-201ENSMUST00000103627 Esf1Q3V1V3 845 aaKnown RBP23.16■■□□□ 1.3
Trav4n-4-201ENSMUST00000103627 Kif15Q6P9L6 1387 aa23.15■■□□□ 1.3
Trav4n-4-201ENSMUST00000103627 Rsf1E9PWW9 1441 aaKnown RBP23.15■■□□□ 1.3
Trav4n-4-201ENSMUST00000103627 Kif21aQ9QXL2 1672 aa23.14■■□□□ 1.29
Trav4n-4-201ENSMUST00000103627 Lamc3Q9R0B6 1581 aa22.96■■□□□ 1.27
Trav4n-4-201ENSMUST00000103627 Eif4g3Q80XI3 1579 aaKnown RBP22.95■■□□□ 1.26
Trav4n-4-201ENSMUST00000103627 Npm1Q61937 292 aaKnown RBP22.92■■□□□ 1.26
Trav4n-4-201ENSMUST00000103627 Shroom2A2ALU4 1481 aa22.85■■□□□ 1.25
Trav4n-4-201ENSMUST00000103627 Cep164Q5DU05 1446 aa22.83■■□□□ 1.25
Trav4n-4-201ENSMUST00000103627 Urb2E9Q7L1 1524 aaKnown RBP22.74■■□□□ 1.23
Trav4n-4-201ENSMUST00000103627 Dhx29Q6PGC1 1365 aaKnown RBP22.69■■□□□ 1.22
Trav4n-4-201ENSMUST00000103627 Plb1Q3TTY0 1478 aa22.68■■□□□ 1.22
Trav4n-4-201ENSMUST00000103627 Il27Q8K3I6 234 aa22.65■■□□□ 1.22
Trav4n-4-201ENSMUST00000103627 Ccdc18Q640L5 1455 aa22.65■■□□□ 1.22
Trav4n-4-201ENSMUST00000103627 TnnQ80Z71 1560 aa22.61■■□□□ 1.21
Trav4n-4-201ENSMUST00000103627 Col17a1Q07563 1470 aa22.6■■□□□ 1.21
Trav4n-4-201ENSMUST00000103627 Crocc2F6XLV1 1638 aa22.6■■□□□ 1.21
Trav4n-4-201ENSMUST00000103627 LrpprcQ6PB66 1392 aaKnown RBP22.57■■□□□ 1.2
Trav4n-4-201ENSMUST00000103627 Top2bQ64511 1612 aa22.56■■□□□ 1.2
Trav4n-4-201ENSMUST00000103627 Pabpn1Q8CCS6 302 aaKnown RBP22.55■■□□□ 1.2
Trav4n-4-201ENSMUST00000103627 Camsap1A2AHC3 1581 aa22.55■■□□□ 1.2
Trav4n-4-201ENSMUST00000103627 Rusc2Q80U22 1514 aa22.49■■□□□ 1.19
Trav4n-4-201ENSMUST00000103627 Ift140E9PY46 1464 aa22.46■■□□□ 1.19
Trav4n-4-201ENSMUST00000103627 Golga3P55937 1487 aa22.46■■□□□ 1.19
Trav4n-4-201ENSMUST00000103627 Pelp1Q9DBD5 1123 aaKnown RBP22.44■■□□□ 1.18
Trav4n-4-201ENSMUST00000103627 Cngb1E1AZ71 1325 aa22.42■■□□□ 1.18
Trav4n-4-201ENSMUST00000103627 PogzQ8BZH4 1409 aaKnown RBP22.41■■□□□ 1.18
Trav4n-4-201ENSMUST00000103627 Zcchc11B2RX14 1644 aaKnown RBP22.3■■□□□ 1.16
Trav4n-4-201ENSMUST00000103627 Duox2A2AQ99 1517 aa22.3■■□□□ 1.16
Trav4n-4-201ENSMUST00000103627 Fmn1Q05860 1466 aa22.28■■□□□ 1.16
Trav4n-4-201ENSMUST00000103627 Disp1Q3TDN0 1521 aa22.23■■□□□ 1.15
Trav4n-4-201ENSMUST00000103627 Grin2bQ01097 1482 aa22.19■■□□□ 1.14
Trav4n-4-201ENSMUST00000103627 Samd9lQ69Z37 1561 aa22.16■■□□□ 1.14
Trav4n-4-201ENSMUST00000103627 Pbrm1Q8BSQ9 1634 aaKnown RBP22.16■■□□□ 1.14
Trav4n-4-201ENSMUST00000103627 Setd1bQ8CFT2 1985 aa22.16■■□□□ 1.14
Trav4n-4-201ENSMUST00000103627 Nup160Q9Z0W3 1402 aaKnown RBP22.14■■□□□ 1.14
Trav4n-4-201ENSMUST00000103627 Cc2d2bA0A286YDU8 1405 aa22.14■■□□□ 1.13
Trav4n-4-201ENSMUST00000103627 Adgrl3Q80TS3 1537 aa22.03■■□□□ 1.12
Trav4n-4-201ENSMUST00000103627 Efcab5A0JP43 1406 aa22.03■■□□□ 1.12
Trav4n-4-201ENSMUST00000103627 Rad54l2Q99NG0 1466 aa22■■□□□ 1.11
Trav4n-4-201ENSMUST00000103627 AqrQ8CFQ3 1481 aaKnown RBP21.98■■□□□ 1.11
Trav4n-4-201ENSMUST00000103627 Arhgef5E9Q7D5 1581 aa21.98■■□□□ 1.11
Trav4n-4-201ENSMUST00000103627 Grin2aP35436 1464 aa21.97■■□□□ 1.11
Trav4n-4-201ENSMUST00000103627 PtprkP35822 1457 aa21.97■■□□□ 1.11
Trav4n-4-201ENSMUST00000103627 Cep170Q6A065 1588 aa21.97■■□□□ 1.11
Trav4n-4-201ENSMUST00000103627 Fgd6Q69ZL1 1399 aa21.97■■□□□ 1.11
Trav4n-4-201ENSMUST00000103627 Ttbk1Q6PCN3 1308 aa21.96■■□□□ 1.11
Trav4n-4-201ENSMUST00000103627 Magi3Q9EQJ9 1476 aa21.95■■□□□ 1.1
Trav4n-4-201ENSMUST00000103627 Gapvd1Q6PAR5 1458 aa21.94■■□□□ 1.1
Trav4n-4-201ENSMUST00000103627 Pcdh10E9PXQ7 1057 aa21.93■■□□□ 1.1
Trav4n-4-201ENSMUST00000103627 Gm156Q58A37 223 aa21.87■■□□□ 1.09
Trav4n-4-201ENSMUST00000103627 AknaQ80VW7 1404 aa21.85■■□□□ 1.09
Trav4n-4-201ENSMUST00000103627 PtprtQ99M80 1454 aa21.83■■□□□ 1.09
Trav4n-4-201ENSMUST00000103627 NrkQ9R0G8 1455 aa21.82■■□□□ 1.08
Trav4n-4-201ENSMUST00000103627 Abcc1O35379 1528 aa21.8■■□□□ 1.08
Trav4n-4-201ENSMUST00000103627 Pla2r1Q62028 1487 aa21.78■■□□□ 1.08
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms