RNA–Protein interactions for RNA: ENSMUST00000103037.4

Ush1g-201, Transcript of Usher syndrome type-1G protein homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ush1g, Length 3,306 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1g-201ENSMUST00000103037 Rpgrip1Q9EPQ2 1331 aa24.84■■□□□ 1.57
Ush1g-201ENSMUST00000103037 NischQ80TM9 1593 aa24.2■■□□□ 1.46
Ush1g-201ENSMUST00000103037 Rhox8Q6VSS7 320 aa23.97■■□□□ 1.43
Ush1g-201ENSMUST00000103037 Acin1Q9JIX8 1338 aaKnown RBP23.92■■□□□ 1.42
Ush1g-201ENSMUST00000103037 Pcgf6Q99NA9 353 aa23.92■■□□□ 1.42
Ush1g-201ENSMUST00000103037 Rtl1Q7M732 1744 aa23.91■■□□□ 1.42
Ush1g-201ENSMUST00000103037 Ccdc180J3QNE4 1664 aa23.82■■□□□ 1.4
Ush1g-201ENSMUST00000103037 DiexfQ8BTT6 772 aaKnown RBP23.5■■□□□ 1.35
Ush1g-201ENSMUST00000103037 Abcc9P70170 1546 aa23.44■■□□□ 1.34
Ush1g-201ENSMUST00000103037 Ehmt2Q9Z148 1263 aaKnown RBP23.39■■□□□ 1.34
Ush1g-201ENSMUST00000103037 Myt1Q8CFC2 1127 aa23.24■■□□□ 1.31
Ush1g-201ENSMUST00000103037 CenpbP27790 599 aa23.15■■□□□ 1.3
Ush1g-201ENSMUST00000103037 Las1lA2BE28 776 aaKnown RBP23.08■■□□□ 1.28
Ush1g-201ENSMUST00000103037 Gm35339A0A140LHH9 1649 aa22.95■■□□□ 1.26
Ush1g-201ENSMUST00000103037 Dcaf1Q80TR8 1506 aa22.91■■□□□ 1.26
Ush1g-201ENSMUST00000103037 Supt5hO55201 1082 aaKnown RBP22.9■■□□□ 1.26
Ush1g-201ENSMUST00000103037 Bcl11aQ9QYE3 773 aa22.88■■□□□ 1.25
Ush1g-201ENSMUST00000103037 Neurod1Q60867 357 aa22.87■■□□□ 1.25
Ush1g-201ENSMUST00000103037 Zcchc6Q5BLK4 1491 aaKnown RBP22.78■■□□□ 1.24
Ush1g-201ENSMUST00000103037 Trim41Q5NCC3 630 aa22.78■■□□□ 1.24
Ush1g-201ENSMUST00000103037 HrcG5E8J6 738 aa22.74■■□□□ 1.23
Ush1g-201ENSMUST00000103037 1700123L14RikQ3V2K7 440 aa22.7■■□□□ 1.23
Ush1g-201ENSMUST00000103037 Abcc8B2RUS7 1588 aa22.62■■□□□ 1.21
Ush1g-201ENSMUST00000103037 Amer1Q7TS75 1132 aa22.49■■□□□ 1.19
Ush1g-201ENSMUST00000103037 PrkcshO08795 521 aa22.41■■□□□ 1.18
Ush1g-201ENSMUST00000103037 Zeb1Q64318 1117 aa22.26■■□□□ 1.15
Ush1g-201ENSMUST00000103037 Csrnp3P59055 597 aa22.18■■□□□ 1.14
Ush1g-201ENSMUST00000103037 Anks4bQ8K3X6 423 aa22.13■■□□□ 1.13
Ush1g-201ENSMUST00000103037 Cngb1E1AZ71 1325 aa22.11■■□□□ 1.13
Ush1g-201ENSMUST00000103037 Ccdc136Q3TVA9 1136 aa22.08■■□□□ 1.12
Ush1g-201ENSMUST00000103037 NefmP08553 848 aa21.98■■□□□ 1.11
Ush1g-201ENSMUST00000103037 Sall2Q9QX96 1004 aa21.98■■□□□ 1.11
Ush1g-201ENSMUST00000103037 Aplp2Q06335 707 aa21.93■■□□□ 1.1
Ush1g-201ENSMUST00000103037 Ifnlr1Q8CGK5 535 aa21.71■■□□□ 1.07
Ush1g-201ENSMUST00000103037 Mier1Q5UAK0 511 aa21.67■■□□□ 1.06
Ush1g-201ENSMUST00000103037 Cdk11bP24788 784 aaKnown RBP21.66■■□□□ 1.06
Ush1g-201ENSMUST00000103037 Cep164Q5DU05 1446 aa21.65■■□□□ 1.06
Ush1g-201ENSMUST00000103037 Wdr66E9Q743 1299 aa21.58■■□□□ 1.05
Ush1g-201ENSMUST00000103037 Nop58Q6DFW4 536 aaKnown RBP21.56■■□□□ 1.04
Ush1g-201ENSMUST00000103037 Gm38655A0A286YDK6 273 aa21.47■■□□□ 1.03
Ush1g-201ENSMUST00000103037 Aebp2Q9Z248 504 aaKnown RBP21.36■■□□□ 1.01
Ush1g-201ENSMUST00000103037 Gab3Q8BSM5 595 aa21.35■■□□□ 1.01
Ush1g-201ENSMUST00000103037 ClspnQ80YR7 1315 aa21.33■■□□□ 1.01
Ush1g-201ENSMUST00000103037 Fam71e1A1L3C1 212 aa21.29■■□□□ 1
Ush1g-201ENSMUST00000103037 Rb1cc1Q9ESK9 1588 aa21.27■■□□□ 1
Ush1g-201ENSMUST00000103037 Pknox2Q8BG99 474 aa21.26■□□□□ 0.99
Ush1g-201ENSMUST00000103037 Ppargc1bQ8VHJ7 1014 aa21.22■□□□□ 0.99
Ush1g-201ENSMUST00000103037 Fgd1P52734 960 aa21.13■□□□□ 0.97
Ush1g-201ENSMUST00000103037 Hdac5Q9Z2V6 1113 aa21.12■□□□□ 0.97
Ush1g-201ENSMUST00000103037 Chic1Q8CBW7 227 aa21.09■□□□□ 0.97
Ush1g-201ENSMUST00000103037 UbtfP25976 765 aaKnown RBP21.02■□□□□ 0.96
Ush1g-201ENSMUST00000103037 Baz1aO88379 1555 aa21.02■□□□□ 0.96
Ush1g-201ENSMUST00000103037 NrdcQ8BHG1 1161 aa21.01■□□□□ 0.95
Ush1g-201ENSMUST00000103037 Plppr3Q7TPB0 716 aa21■□□□□ 0.95
Ush1g-201ENSMUST00000103037 Rsf1E9PWW9 1441 aaKnown RBP20.99■□□□□ 0.95
Ush1g-201ENSMUST00000103037 Mapk8ip2Q9ERE9 830 aa20.95■□□□□ 0.94
Ush1g-201ENSMUST00000103037 Tnnt3Q9QZ47 272 aa20.94■□□□□ 0.94
Ush1g-201ENSMUST00000103037 SafbD3YXK2 937 aaKnown RBP20.9■□□□□ 0.94
Ush1g-201ENSMUST00000103037 TonslQ6NZL6 1363 aa20.9■□□□□ 0.94
Ush1g-201ENSMUST00000103037 Hnrnpul2Q00PI9 745 aaKnown RBP20.86■□□□□ 0.93
Ush1g-201ENSMUST00000103037 CatipB9EKE5 520 aa20.84■□□□□ 0.93
Ush1g-201ENSMUST00000103037 Anp32aO35381 247 aa20.71■□□□□ 0.91
Ush1g-201ENSMUST00000103037 Ccdc88bQ4QRL3 1481 aa20.68■□□□□ 0.9
Ush1g-201ENSMUST00000103037 Rtl5Q5DTT4 599 aa20.67■□□□□ 0.9
Ush1g-201ENSMUST00000103037 Plcd4Q8K3R3 807 aa20.61■□□□□ 0.89
Ush1g-201ENSMUST00000103037 Ap3b1Q9Z1T1 1105 aa20.6■□□□□ 0.89
Ush1g-201ENSMUST00000103037 Pelp1Q9DBD5 1123 aaKnown RBP20.6■□□□□ 0.89
Ush1g-201ENSMUST00000103037 Smarca2Q6DIC0 1577 aa20.59■□□□□ 0.89
Ush1g-201ENSMUST00000103037 Gtf3c3Q3TMP1 882 aa20.58■□□□□ 0.89
Ush1g-201ENSMUST00000103037 Gtf3c5Q8R2T8 520 aa20.55■□□□□ 0.88
Ush1g-201ENSMUST00000103037 Ttbk1Q6PCN3 1308 aa20.52■□□□□ 0.87
Ush1g-201ENSMUST00000103037 ScribQ80U72 1612 aa20.5■□□□□ 0.87
Ush1g-201ENSMUST00000103037 Kdm5dQ62240 1548 aa20.46■□□□□ 0.87
Ush1g-201ENSMUST00000103037 Golga3P55937 1487 aa20.45■□□□□ 0.86
Ush1g-201ENSMUST00000103037 Stra8P70278 393 aa20.44■□□□□ 0.86
Ush1g-201ENSMUST00000103037 Il27Q8K3I6 234 aa20.42■□□□□ 0.86
Ush1g-201ENSMUST00000103037 BccipQ9CWI3 316 aa20.38■□□□□ 0.85
Ush1g-201ENSMUST00000103037 Brd4Q9ESU6 1400 aaKnown RBP20.37■□□□□ 0.85
Ush1g-201ENSMUST00000103037 Nolc1E9Q5C9 702 aaKnown RBP20.36■□□□□ 0.85
Ush1g-201ENSMUST00000103037 Myt1lP97500 1187 aa20.34■□□□□ 0.85
Ush1g-201ENSMUST00000103037 Crybg2B7ZCC2 1516 aa20.34■□□□□ 0.85
Ush1g-201ENSMUST00000103037 Znf710Q3U288 666 aa20.33■□□□□ 0.85
Ush1g-201ENSMUST00000103037 Calr4Q3TQS0 420 aa20.32■□□□□ 0.84
Ush1g-201ENSMUST00000103037 Zfp777B9EKF4 885 aa20.32■□□□□ 0.84
Ush1g-201ENSMUST00000103037 Esf1Q3V1V3 845 aaKnown RBP20.27■□□□□ 0.84
Ush1g-201ENSMUST00000103037 Upf2A2AT37 1269 aaKnown RBP20.27■□□□□ 0.83
Ush1g-201ENSMUST00000103037 Irx3P81067 507 aa20.27■□□□□ 0.83
Ush1g-201ENSMUST00000103037 Supt16hQ920B9 1047 aa20.25■□□□□ 0.83
Ush1g-201ENSMUST00000103037 Eid3Q3V124 375 aa20.22■□□□□ 0.83
Ush1g-201ENSMUST00000103037 Ipo4Q8VI75 1082 aa20.22■□□□□ 0.83
Ush1g-201ENSMUST00000103037 Plekhg3Q4VAC9 1341 aa20.21■□□□□ 0.83
Ush1g-201ENSMUST00000103037 NacadQ5SWP3 1504 aa20.18■□□□□ 0.82
Ush1g-201ENSMUST00000103037 Rapgef2Q8CHG7 1496 aa20.14■□□□□ 0.82
Ush1g-201ENSMUST00000103037 Ncapd3Q6ZQK0 1506 aa20.12■□□□□ 0.81
Ush1g-201ENSMUST00000103037 Scaf1Q5U4C3 1256 aaKnown RBP20.1■□□□□ 0.81
Ush1g-201ENSMUST00000103037 Ppp4r2Q0VGB7 417 aa20.09■□□□□ 0.81
Ush1g-201ENSMUST00000103037 Clip1Q922J3 1391 aa20.08■□□□□ 0.8
Ush1g-201ENSMUST00000103037 Ccdc9Q8VC31 543 aaKnown RBP20.07■□□□□ 0.8
Ush1g-201ENSMUST00000103037 Rpap1Q80TE0 1409 aa20.06■□□□□ 0.8
Ush1g-201ENSMUST00000103037 Znf316Q6PGE4 1016 aa20.05■□□□□ 0.8
Retrieved 100 of 22,080 RNA–protein pairs in 61.3 ms