RNA–Protein interactions for RNA: ENSMUST00000098441.9

Col6a6-202, Transcript of Collagen alpha-6(VI) chain, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Col6a6, Length 8,781 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6-202ENSMUST00000098441 Rhox8Q6VSS7 320 aa18.9■□□□□ 0.62
Col6a6-202ENSMUST00000098441 Rpgrip1Q9EPQ2 1331 aa18.5■□□□□ 0.55
Col6a6-202ENSMUST00000098441 Cngb1E1AZ71 1325 aa18.27■□□□□ 0.52
Col6a6-202ENSMUST00000098441 Las1lA2BE28 776 aaKnown RBP18.09■□□□□ 0.49
Col6a6-202ENSMUST00000098441 Pelp1Q9DBD5 1123 aaKnown RBP17.97■□□□□ 0.47
Col6a6-202ENSMUST00000098441 Wdr66E9Q743 1299 aa17.16■□□□□ 0.34
Col6a6-202ENSMUST00000098441 Amer1Q7TS75 1132 aa17.14■□□□□ 0.33
Col6a6-202ENSMUST00000098441 Ehmt2Q9Z148 1263 aaKnown RBP17.03■□□□□ 0.32
Col6a6-202ENSMUST00000098441 CenpbP27790 599 aa16.97■□□□□ 0.31
Col6a6-202ENSMUST00000098441 4930567H17RikQ3V0K5 233 aa16.94■□□□□ 0.3
Col6a6-202ENSMUST00000098441 Ube2uB1AUC4 352 aa16.92■□□□□ 0.3
Col6a6-202ENSMUST00000098441 Stra8P70278 393 aa16.89■□□□□ 0.29
Col6a6-202ENSMUST00000098441 Zeb1Q64318 1117 aa16.88■□□□□ 0.29
Col6a6-202ENSMUST00000098441 Rtl1Q7M732 1744 aa16.84■□□□□ 0.29
Col6a6-202ENSMUST00000098441 Myt1Q8CFC2 1127 aa16.81■□□□□ 0.28
Col6a6-202ENSMUST00000098441 Esf1Q3V1V3 845 aaKnown RBP16.69■□□□□ 0.26
Col6a6-202ENSMUST00000098441 NefmP08553 848 aa16.55■□□□□ 0.24
Col6a6-202ENSMUST00000098441 Ccdc180J3QNE4 1664 aa16.54■□□□□ 0.24
Col6a6-202ENSMUST00000098441 Ccdc136Q3TVA9 1136 aa16.52■□□□□ 0.23
Col6a6-202ENSMUST00000098441 Trim41Q5NCC3 630 aa16.52■□□□□ 0.23
Col6a6-202ENSMUST00000098441 Npm2Q80W85 207 aa16.49■□□□□ 0.23
Col6a6-202ENSMUST00000098441 Acin1Q9JIX8 1338 aaKnown RBP16.42■□□□□ 0.22
Col6a6-202ENSMUST00000098441 Gab3Q8BSM5 595 aa16.32■□□□□ 0.2
Col6a6-202ENSMUST00000098441 Tnnt3Q9QZ47 272 aa16.26■□□□□ 0.19
Col6a6-202ENSMUST00000098441 4933416C03RikQ3V063 378 aa16.24■□□□□ 0.19
Col6a6-202ENSMUST00000098441 Myt1lP97500 1187 aa16.24■□□□□ 0.19
Col6a6-202ENSMUST00000098441 Ttbk1Q6PCN3 1308 aa16.23■□□□□ 0.19
Col6a6-202ENSMUST00000098441 NeflP08551 543 aa16.2■□□□□ 0.18
Col6a6-202ENSMUST00000098441 Cdk11bP24788 784 aaKnown RBP16.17■□□□□ 0.18
Col6a6-202ENSMUST00000098441 Anp32bQ9EST5 272 aaKnown RBP16.17■□□□□ 0.18
Col6a6-202ENSMUST00000098441 Rtl5Q5DTT4 599 aa16.17■□□□□ 0.18
Col6a6-202ENSMUST00000098441 Slc24a1Q91WD8 1130 aa16.14■□□□□ 0.17
Col6a6-202ENSMUST00000098441 NrdcQ8BHG1 1161 aa16.06■□□□□ 0.16
Col6a6-202ENSMUST00000098441 UbtfP25976 765 aaKnown RBP16.03■□□□□ 0.16
Col6a6-202ENSMUST00000098441 NischQ80TM9 1593 aa15.97■□□□□ 0.15
Col6a6-202ENSMUST00000098441 HrcG5E8J6 738 aa15.94■□□□□ 0.14
Col6a6-202ENSMUST00000098441 DiexfQ8BTT6 772 aaKnown RBP15.91■□□□□ 0.14
Col6a6-202ENSMUST00000098441 Nop58Q6DFW4 536 aaKnown RBP15.88■□□□□ 0.13
Col6a6-202ENSMUST00000098441 Pcgf6Q99NA9 353 aa15.82■□□□□ 0.12
Col6a6-202ENSMUST00000098441 NclP09405 707 aaKnown RBP15.77■□□□□ 0.11
Col6a6-202ENSMUST00000098441 Eif5bQ05D44 1216 aaKnown RBP15.66■□□□□ 0.1
Col6a6-202ENSMUST00000098441 Ythdc1E9Q5K9 736 aaKnown RBP15.64■□□□□ 0.09
Col6a6-202ENSMUST00000098441 Fam50aQ9WV03 339 aaKnown RBP15.58■□□□□ 0.08
Col6a6-202ENSMUST00000098441 Os9Q8K2C7 672 aa15.57■□□□□ 0.08
Col6a6-202ENSMUST00000098441 TonslQ6NZL6 1363 aa15.56■□□□□ 0.08
Col6a6-202ENSMUST00000098441 Anp32aO35381 247 aa15.53■□□□□ 0.08
Col6a6-202ENSMUST00000098441 DaxxO35613 739 aa15.52■□□□□ 0.07
Col6a6-202ENSMUST00000098441 Neurod1Q60867 357 aa15.51■□□□□ 0.07
Col6a6-202ENSMUST00000098441 Supt5hO55201 1082 aaKnown RBP15.35■□□□□ 0.05
Col6a6-202ENSMUST00000098441 ClspnQ80YR7 1315 aa15.34■□□□□ 0.05
Col6a6-202ENSMUST00000098441 Il27Q8K3I6 234 aa15.3■□□□□ 0.04
Col6a6-202ENSMUST00000098441 Ccdc9Q8VC31 543 aaKnown RBP15.3■□□□□ 0.04
Col6a6-202ENSMUST00000098441 CatipB9EKE5 520 aa15.28■□□□□ 0.04
Col6a6-202ENSMUST00000098441 Hdac5Q9Z2V6 1113 aa15.23■□□□□ 0.03
Col6a6-202ENSMUST00000098441 Ap3b1Q9Z1T1 1105 aa15.18■□□□□ 0.02
Col6a6-202ENSMUST00000098441 Upf2A2AT37 1269 aaKnown RBP15.18■□□□□ 0.02
Col6a6-202ENSMUST00000098441 Nlrp6Q91WS2 869 aa15.12■□□□□ 0.01
Col6a6-202ENSMUST00000098441 Ppargc1bQ8VHJ7 1014 aa15.12■□□□□ 0.01
Col6a6-202ENSMUST00000098441 Zcchc6Q5BLK4 1491 aaKnown RBP15.1■□□□□ 0.01
Col6a6-202ENSMUST00000098441 Mier1Q5UAK0 511 aa15.1■□□□□ 0.01
Col6a6-202ENSMUST00000098441 Aplp2Q06335 707 aa15.05■□□□□ 0
Col6a6-202ENSMUST00000098441 Anks4bQ8K3X6 423 aa15.04■□□□□ -0
Col6a6-202ENSMUST00000098441 Hsp90aa1P07901 733 aaKnown RBP15.03■□□□□ -0
Col6a6-202ENSMUST00000098441 Trim44Q9QXA7 346 aa14.97□□□□□ -0.01
Col6a6-202ENSMUST00000098441 Polr3glQ8R0C0 218 aa14.95□□□□□ -0.02
Col6a6-202ENSMUST00000098441 Hnrnpul2Q00PI9 745 aaKnown RBP14.93□□□□□ -0.02
Col6a6-202ENSMUST00000098441 Gm13697A2AK42 830 aa14.93□□□□□ -0.02
Col6a6-202ENSMUST00000098441 Calr4Q3TQS0 420 aa14.91□□□□□ -0.02
Col6a6-202ENSMUST00000098441 Lmod3E9QA62 571 aa14.9□□□□□ -0.02
Col6a6-202ENSMUST00000098441 Ccer2J3QPU5 274 aa14.89□□□□□ -0.03
Col6a6-202ENSMUST00000098441 ArxO35085 564 aa14.89□□□□□ -0.03
Col6a6-202ENSMUST00000098441 Ppp4r2Q0VGB7 417 aa14.84□□□□□ -0.03
Col6a6-202ENSMUST00000098441 Wdr43Q6ZQL4 677 aaKnown RBP14.84□□□□□ -0.03
Col6a6-202ENSMUST00000098441 DekQ7TNV0 380 aaKnown RBP14.83□□□□□ -0.04
Col6a6-202ENSMUST00000098441 Csrnp3P59055 597 aa14.81□□□□□ -0.04
Col6a6-202ENSMUST00000098441 Adam1bQ8R534 806 aa14.8□□□□□ -0.04
Col6a6-202ENSMUST00000098441 Atp1b4Q99ME6 356 aa14.8□□□□□ -0.04
Col6a6-202ENSMUST00000098441 Zbtb7cQ8VCZ7 619 aa14.8□□□□□ -0.04
Col6a6-202ENSMUST00000098441 Chic1Q8CBW7 227 aa14.79□□□□□ -0.04
Col6a6-202ENSMUST00000098441 Dcaf1Q80TR8 1506 aa14.78□□□□□ -0.04
Col6a6-202ENSMUST00000098441 Plekhg3Q4VAC9 1341 aa14.77□□□□□ -0.05
Col6a6-202ENSMUST00000098441 Erich6D3Z6S9 713 aa14.76□□□□□ -0.05
Col6a6-202ENSMUST00000098441 Htatsf1Q8BGC0 757 aa14.75□□□□□ -0.05
Col6a6-202ENSMUST00000098441 Npm1Q61937 292 aaKnown RBP14.74□□□□□ -0.05
Col6a6-202ENSMUST00000098441 Abcc9P70170 1546 aa14.74□□□□□ -0.05
Col6a6-202ENSMUST00000098441 Gm13695A2AK44 830 aa14.73□□□□□ -0.05
Col6a6-202ENSMUST00000098441 Lmod2Q3UHZ5 550 aa14.71□□□□□ -0.05
Col6a6-202ENSMUST00000098441 Zbtb4Q5F293 982 aa14.66□□□□□ -0.06
Col6a6-202ENSMUST00000098441 Ccdc27Q3V036 639 aa14.65□□□□□ -0.06
Col6a6-202ENSMUST00000098441 Hsp90ab1P11499 724 aaKnown RBP14.65□□□□□ -0.06
Col6a6-202ENSMUST00000098441 PtmaP26350 111 aa14.64□□□□□ -0.07
Col6a6-202ENSMUST00000098441 CanxP35564 591 aaKnown RBP14.64□□□□□ -0.07
Col6a6-202ENSMUST00000098441 Fgd1P52734 960 aa14.61□□□□□ -0.07
Col6a6-202ENSMUST00000098441 Clip1Q922J3 1391 aa14.61□□□□□ -0.07
Col6a6-202ENSMUST00000098441 Gm35339A0A140LHH9 1649 aa14.6□□□□□ -0.07
Col6a6-202ENSMUST00000098441 Trim30dE9PWL0 497 aa14.6□□□□□ -0.07
Col6a6-202ENSMUST00000098441 Prdm10Q3UTQ7 1184 aa14.6□□□□□ -0.07
Col6a6-202ENSMUST00000098441 Cep164Q5DU05 1446 aa14.59□□□□□ -0.07
Col6a6-202ENSMUST00000098441 Znf326O88291 580 aa14.59□□□□□ -0.07
Col6a6-202ENSMUST00000098441 Gm38655A0A286YDK6 273 aa14.58□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 55.9 ms