RNA–Protein interactions for RNA: ENSMUST00000096127.10

Ccdc50-202, Transcript of Coiled-coil domain-containing protein 50, mousemouse

TSL 1 (best) BASIC

Gene Ccdc50, Length 1,096 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc50-202ENSMUST00000096127 Gm35339A0A140LHH9 1649 aa54.64■■■■■ 6.34
Ccdc50-202ENSMUST00000096127 NischQ80TM9 1593 aa53.93■■■■■ 6.22
Ccdc50-202ENSMUST00000096127 Abcc9P70170 1546 aa52.25■■■■■ 5.95
Ccdc50-202ENSMUST00000096127 Abcc8B2RUS7 1588 aa52.14■■■■■ 5.94
Ccdc50-202ENSMUST00000096127 ScribQ80U72 1612 aa50.13■■■■■ 5.62
Ccdc50-202ENSMUST00000096127 NacadQ5SWP3 1504 aa48.67■■■■■ 5.38
Ccdc50-202ENSMUST00000096127 Kdm5dQ62240 1548 aa48.53■■■■■ 5.36
Ccdc50-202ENSMUST00000096127 Dcaf1Q80TR8 1506 aa48.14■■■■■ 5.3
Ccdc50-202ENSMUST00000096127 Sycp2Q9CUU3 1500 aa47.7■■■■■ 5.23
Ccdc50-202ENSMUST00000096127 Rb1cc1Q9ESK9 1588 aa46.99■■■■■ 5.11
Ccdc50-202ENSMUST00000096127 BicraF8VPZ9 1578 aa46.95■■■■■ 5.11
Ccdc50-202ENSMUST00000096127 Rhox8Q6VSS7 320 aa46.59■■■■■ 5.05
Ccdc50-202ENSMUST00000096127 Ccdc180J3QNE4 1664 aa46.46■■■■■ 5.03
Ccdc50-202ENSMUST00000096127 Baz1aO88379 1555 aa46.39■■■■■ 5.02
Ccdc50-202ENSMUST00000096127 Crybg2B7ZCC2 1516 aa46.34■■■■■ 5.01
Ccdc50-202ENSMUST00000096127 Pds5bQ4VA53 1446 aaKnown RBP45.72■■■■■ 4.91
Ccdc50-202ENSMUST00000096127 Zcchc6Q5BLK4 1491 aaKnown RBP45.61■■■■■ 4.89
Ccdc50-202ENSMUST00000096127 Dnajc5bQ9CQ94 199 aa45.35■■■■■ 4.85
Ccdc50-202ENSMUST00000096127 Atad2bE9Q166 1460 aaKnown RBP45.3■■■■■ 4.84
Ccdc50-202ENSMUST00000096127 Thoc2B1AZI6 1594 aaKnown RBP45.21■■■■■ 4.83
Ccdc50-202ENSMUST00000096127 Smarca2Q6DIC0 1577 aa45.05■■■■■ 4.8
Ccdc50-202ENSMUST00000096127 Smarca4Q3TKT4 1613 aaKnown RBP44.93■■■■■ 4.78
Ccdc50-202ENSMUST00000096127 Cecr2E9Q2Z1 1453 aa44.78■■■■■ 4.76
Ccdc50-202ENSMUST00000096127 Ercc6F8VPZ5 1481 aa44.69■■■■■ 4.74
Ccdc50-202ENSMUST00000096127 Iqgap2Q3UQ44 1575 aa44.65■■■■■ 4.74
Ccdc50-202ENSMUST00000096127 Cc2d2aQ8CFW7 1633 aa44.43■■■■■ 4.7
Ccdc50-202ENSMUST00000096127 Rtl1Q7M732 1744 aa44.32■■■■■ 4.69
Ccdc50-202ENSMUST00000096127 Wdr62Q3U3T8 1523 aa44.28■■■■■ 4.68
Ccdc50-202ENSMUST00000096127 Fam135aQ6NS59 1506 aa44.25■■■■■ 4.67
Ccdc50-202ENSMUST00000096127 Frmpd1A2AKB4 1549 aa44.19■■■■■ 4.67
Ccdc50-202ENSMUST00000096127 Phldb1Q6PDH0 1371 aaKnown RBP43.99■■■■■ 4.63
Ccdc50-202ENSMUST00000096127 Baz1bQ9Z277 1479 aa43.96■■■■■ 4.63
Ccdc50-202ENSMUST00000096127 CftrP26361 1476 aa43.89■■■■■ 4.62
Ccdc50-202ENSMUST00000096127 Brd4Q9ESU6 1400 aaKnown RBP43.84■■■■■ 4.61
Ccdc50-202ENSMUST00000096127 Cttnbp2B9EJA2 1648 aa43.79■■■■■ 4.6
Ccdc50-202ENSMUST00000096127 Synj1Q8CHC4 1574 aa43.71■■■■■ 4.59
Ccdc50-202ENSMUST00000096127 Ccdc136Q3TVA9 1136 aa43.58■■■■■ 4.57
Ccdc50-202ENSMUST00000096127 Ubl4bQ9CQ84 188 aa43.48■■■■■ 4.55
Ccdc50-202ENSMUST00000096127 Unc13aQ4KUS2 1712 aa43.47■■■■■ 4.55
Ccdc50-202ENSMUST00000096127 Mrc2Q64449 1479 aa43.19■■■■■ 4.51
Ccdc50-202ENSMUST00000096127 Trim41Q5NCC3 630 aa43.1■■■■■ 4.49
Ccdc50-202ENSMUST00000096127 Esf1Q3V1V3 845 aaKnown RBP42.99■■■■■ 4.47
Ccdc50-202ENSMUST00000096127 Rsf1E9PWW9 1441 aaKnown RBP42.8■■■■■ 4.44
Ccdc50-202ENSMUST00000096127 Kif15Q6P9L6 1387 aa42.65■■■■■ 4.42
Ccdc50-202ENSMUST00000096127 Cux2P70298 1426 aa42.59■■■■■ 4.41
Ccdc50-202ENSMUST00000096127 Lamc3Q9R0B6 1581 aa42.56■■■■■ 4.4
Ccdc50-202ENSMUST00000096127 Golga3P55937 1487 aa42.3■■■■■ 4.36
Ccdc50-202ENSMUST00000096127 Top2bQ64511 1612 aa42.21■■■■■ 4.35
Ccdc50-202ENSMUST00000096127 Lrriq1Q0P5X1 1673 aa42.15■■■■■ 4.34
Ccdc50-202ENSMUST00000096127 Npm1Q61937 292 aaKnown RBP42.15■■■■■ 4.34
Ccdc50-202ENSMUST00000096127 Kif21aQ9QXL2 1672 aa42.15■■■■■ 4.34
Ccdc50-202ENSMUST00000096127 TnnQ80Z71 1560 aa42.13■■■■■ 4.33
Ccdc50-202ENSMUST00000096127 Cep164Q5DU05 1446 aa42.07■■■■■ 4.33
Ccdc50-202ENSMUST00000096127 Cngb1E1AZ71 1325 aa41.96■■■■■ 4.31
Ccdc50-202ENSMUST00000096127 Ccdc18Q640L5 1455 aa41.94■■■■■ 4.3
Ccdc50-202ENSMUST00000096127 Fmn1Q05860 1466 aa41.83■■■■■ 4.29
Ccdc50-202ENSMUST00000096127 Camsap1A2AHC3 1581 aa41.78■■■■■ 4.28
Ccdc50-202ENSMUST00000096127 Dhx29Q6PGC1 1365 aaKnown RBP41.73■■■■■ 4.27
Ccdc50-202ENSMUST00000096127 LrpprcQ6PB66 1392 aaKnown RBP41.72■■■■■ 4.27
Ccdc50-202ENSMUST00000096127 Il27Q8K3I6 234 aa41.65■■■■■ 4.26
Ccdc50-202ENSMUST00000096127 Eif4g3Q80XI3 1579 aaKnown RBP41.63■■■■■ 4.25
Ccdc50-202ENSMUST00000096127 Urb2E9Q7L1 1524 aaKnown RBP41.58■■■■■ 4.25
Ccdc50-202ENSMUST00000096127 Plb1Q3TTY0 1478 aa41.53■■■■■ 4.24
Ccdc50-202ENSMUST00000096127 Crocc2F6XLV1 1638 aa41.49■■■■■ 4.23
Ccdc50-202ENSMUST00000096127 PogzQ8BZH4 1409 aaKnown RBP41.48■■■■■ 4.23
Ccdc50-202ENSMUST00000096127 Dnajc5P60904 198 aa41.45■■■■■ 4.23
Ccdc50-202ENSMUST00000096127 Ift140E9PY46 1464 aa41.26■■■■■ 4.2
Ccdc50-202ENSMUST00000096127 Grin2bQ01097 1482 aa41.26■■■■■ 4.2
Ccdc50-202ENSMUST00000096127 Duox2A2AQ99 1517 aa41.25■■■■■ 4.19
Ccdc50-202ENSMUST00000096127 Ccdc88bQ4QRL3 1481 aa41.12■■■■■ 4.17
Ccdc50-202ENSMUST00000096127 Shroom2A2ALU4 1481 aa41.1■■■■■ 4.17
Ccdc50-202ENSMUST00000096127 Efcab5A0JP43 1406 aa41.06■■■■■ 4.16
Ccdc50-202ENSMUST00000096127 Rusc2Q80U22 1514 aa41.03■■■■■ 4.16
Ccdc50-202ENSMUST00000096127 Top2aQ01320 1528 aaKnown RBP41.01■■■■■ 4.16
Ccdc50-202ENSMUST00000096127 Disp1Q3TDN0 1521 aa40.94■■■■■ 4.14
Ccdc50-202ENSMUST00000096127 NrkQ9R0G8 1455 aa40.9■■■■■ 4.14
Ccdc50-202ENSMUST00000096127 Samd9lQ69Z37 1561 aa40.88■■■■■ 4.13
Ccdc50-202ENSMUST00000096127 Nup160Q9Z0W3 1402 aaKnown RBP40.81■■■■■ 4.12
Ccdc50-202ENSMUST00000096127 Pbrm1Q8BSQ9 1634 aaKnown RBP40.8■■■■■ 4.12
Ccdc50-202ENSMUST00000096127 Chic1Q8CBW7 227 aa40.8■■■■■ 4.12
Ccdc50-202ENSMUST00000096127 Cc2d2bA0A286YDU8 1405 aa40.76■■■■■ 4.11
Ccdc50-202ENSMUST00000096127 Shroom4Q1W617 1475 aa40.65■■■■■ 4.1
Ccdc50-202ENSMUST00000096127 Pabpn1Q8CCS6 302 aaKnown RBP40.65■■■■■ 4.1
Ccdc50-202ENSMUST00000096127 Rad54l2Q99NG0 1466 aa40.58■■■■■ 4.09
Ccdc50-202ENSMUST00000096127 PtprkP35822 1457 aa40.56■■■■■ 4.08
Ccdc50-202ENSMUST00000096127 Setd1bQ8CFT2 1985 aa40.55■■■■■ 4.08
Ccdc50-202ENSMUST00000096127 Grin2aP35436 1464 aa40.54■■■■■ 4.08
Ccdc50-202ENSMUST00000096127 Magi3Q9EQJ9 1476 aa40.54■■■■■ 4.08
Ccdc50-202ENSMUST00000096127 Col17a1Q07563 1470 aa40.44■■■■■ 4.06
Ccdc50-202ENSMUST00000096127 AqrQ8CFQ3 1481 aaKnown RBP40.44■■■■■ 4.06
Ccdc50-202ENSMUST00000096127 Gpatch8A2A6A1 1505 aa40.43■■■■■ 4.06
Ccdc50-202ENSMUST00000096127 SynmQ70IV5 1561 aa40.39■■■■■ 4.06
Ccdc50-202ENSMUST00000096127 Pla2r1Q62028 1487 aa40.32■■■■■ 4.04
Ccdc50-202ENSMUST00000096127 Pelp1Q9DBD5 1123 aaKnown RBP40.3■■■■■ 4.04
Ccdc50-202ENSMUST00000096127 Fgd6Q69ZL1 1399 aa40.26■■■■■ 4.04
Ccdc50-202ENSMUST00000096127 HrcG5E8J6 738 aa40.24■■■■■ 4.03
Ccdc50-202ENSMUST00000096127 Zcchc11B2RX14 1644 aaKnown RBP40.17■■■■■ 4.02
Ccdc50-202ENSMUST00000096127 Zeb1Q64318 1117 aa40.13■■■■■ 4.01
Ccdc50-202ENSMUST00000096127 Mroh2bQ7M6Y6 1581 aa40.12■■■■■ 4.01
Ccdc50-202ENSMUST00000096127 Npm2Q80W85 207 aa40.04■■■■■ 4
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms