RNA–Protein interactions for RNA: ENSMUST00000092907.11

Rpa1-202, Transcript of Replication protein A 70 kDa DNA-binding subunit, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Rpa1, Length 5,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa1-202ENSMUST00000092907 NischQ80TM9 1593 aa18.9■□□□□ 0.62
Rpa1-202ENSMUST00000092907 Gm35339A0A140LHH9 1649 aa18.65■□□□□ 0.58
Rpa1-202ENSMUST00000092907 Abcc9P70170 1546 aa18.32■□□□□ 0.52
Rpa1-202ENSMUST00000092907 Abcc8B2RUS7 1588 aa17.94■□□□□ 0.46
Rpa1-202ENSMUST00000092907 Rhox8Q6VSS7 320 aa17.46■□□□□ 0.39
Rpa1-202ENSMUST00000092907 Rtl1Q7M732 1744 aa17.23■□□□□ 0.35
Rpa1-202ENSMUST00000092907 Dcaf1Q80TR8 1506 aa16.94■□□□□ 0.3
Rpa1-202ENSMUST00000092907 Ccdc180J3QNE4 1664 aa16.77■□□□□ 0.27
Rpa1-202ENSMUST00000092907 ScribQ80U72 1612 aa16.62■□□□□ 0.25
Rpa1-202ENSMUST00000092907 NacadQ5SWP3 1504 aa16.56■□□□□ 0.24
Rpa1-202ENSMUST00000092907 Rb1cc1Q9ESK9 1588 aa16.56■□□□□ 0.24
Rpa1-202ENSMUST00000092907 Kdm5dQ62240 1548 aa16.45■□□□□ 0.22
Rpa1-202ENSMUST00000092907 Baz1aO88379 1555 aa16.41■□□□□ 0.22
Rpa1-202ENSMUST00000092907 Crybg2B7ZCC2 1516 aa16.27■□□□□ 0.2
Rpa1-202ENSMUST00000092907 Zcchc6Q5BLK4 1491 aaKnown RBP16.12■□□□□ 0.17
Rpa1-202ENSMUST00000092907 Sycp2Q9CUU3 1500 aa16.1■□□□□ 0.17
Rpa1-202ENSMUST00000092907 Trim41Q5NCC3 630 aa16.09■□□□□ 0.17
Rpa1-202ENSMUST00000092907 Ccdc136Q3TVA9 1136 aa16.01■□□□□ 0.15
Rpa1-202ENSMUST00000092907 HrcG5E8J6 738 aa16■□□□□ 0.15
Rpa1-202ENSMUST00000092907 Smarca2Q6DIC0 1577 aa15.92■□□□□ 0.14
Rpa1-202ENSMUST00000092907 Brd4Q9ESU6 1400 aaKnown RBP15.81■□□□□ 0.12
Rpa1-202ENSMUST00000092907 Rpgrip1Q9EPQ2 1331 aa15.66■□□□□ 0.1
Rpa1-202ENSMUST00000092907 Cngb1E1AZ71 1325 aa15.53■□□□□ 0.08
Rpa1-202ENSMUST00000092907 Esf1Q3V1V3 845 aaKnown RBP15.53■□□□□ 0.08
Rpa1-202ENSMUST00000092907 BicraF8VPZ9 1578 aa15.52■□□□□ 0.08
Rpa1-202ENSMUST00000092907 Cep164Q5DU05 1446 aa15.5■□□□□ 0.07
Rpa1-202ENSMUST00000092907 Golga3P55937 1487 aa15.44■□□□□ 0.06
Rpa1-202ENSMUST00000092907 Smarca4Q3TKT4 1613 aaKnown RBP15.43■□□□□ 0.06
Rpa1-202ENSMUST00000092907 Cttnbp2B9EJA2 1648 aa15.41■□□□□ 0.06
Rpa1-202ENSMUST00000092907 Cecr2E9Q2Z1 1453 aa15.4■□□□□ 0.06
Rpa1-202ENSMUST00000092907 CftrP26361 1476 aa15.37■□□□□ 0.05
Rpa1-202ENSMUST00000092907 Synj1Q8CHC4 1574 aa15.37■□□□□ 0.05
Rpa1-202ENSMUST00000092907 Pds5bQ4VA53 1446 aaKnown RBP15.34■□□□□ 0.05
Rpa1-202ENSMUST00000092907 Atad2bE9Q166 1460 aaKnown RBP15.27■□□□□ 0.04
Rpa1-202ENSMUST00000092907 Iqgap2Q3UQ44 1575 aa15.18■□□□□ 0.02
Rpa1-202ENSMUST00000092907 Acin1Q9JIX8 1338 aaKnown RBP15.14■□□□□ 0.01
Rpa1-202ENSMUST00000092907 Ercc6F8VPZ5 1481 aa15.13■□□□□ 0.01
Rpa1-202ENSMUST00000092907 Fmn1Q05860 1466 aa15.13■□□□□ 0.01
Rpa1-202ENSMUST00000092907 Top2bQ64511 1612 aa15.13■□□□□ 0.01
Rpa1-202ENSMUST00000092907 Rsf1E9PWW9 1441 aaKnown RBP15.12■□□□□ 0.01
Rpa1-202ENSMUST00000092907 Gab3Q8BSM5 595 aa15.07■□□□□ 0
Rpa1-202ENSMUST00000092907 Chic1Q8CBW7 227 aa15.04■□□□□ -0
Rpa1-202ENSMUST00000092907 Ccdc88bQ4QRL3 1481 aa15.01□□□□□ -0.01
Rpa1-202ENSMUST00000092907 Npm2Q80W85 207 aa14.92□□□□□ -0.02
Rpa1-202ENSMUST00000092907 Cc2d2aQ8CFW7 1633 aa14.91□□□□□ -0.02
Rpa1-202ENSMUST00000092907 Wdr62Q3U3T8 1523 aa14.89□□□□□ -0.03
Rpa1-202ENSMUST00000092907 Ehmt2Q9Z148 1263 aaKnown RBP14.89□□□□□ -0.03
Rpa1-202ENSMUST00000092907 Top2aQ01320 1528 aaKnown RBP14.88□□□□□ -0.03
Rpa1-202ENSMUST00000092907 Frmpd1A2AKB4 1549 aa14.83□□□□□ -0.04
Rpa1-202ENSMUST00000092907 Rapgef2Q8CHG7 1496 aa14.8□□□□□ -0.04
Rpa1-202ENSMUST00000092907 Ccdc18Q640L5 1455 aa14.79□□□□□ -0.04
Rpa1-202ENSMUST00000092907 Kif15Q6P9L6 1387 aa14.78□□□□□ -0.04
Rpa1-202ENSMUST00000092907 Phldb1Q6PDH0 1371 aaKnown RBP14.78□□□□□ -0.04
Rpa1-202ENSMUST00000092907 TnnQ80Z71 1560 aa14.77□□□□□ -0.04
Rpa1-202ENSMUST00000092907 Lamc3Q9R0B6 1581 aa14.76□□□□□ -0.05
Rpa1-202ENSMUST00000092907 NefmP08553 848 aa14.72□□□□□ -0.05
Rpa1-202ENSMUST00000092907 Baz1bQ9Z277 1479 aa14.72□□□□□ -0.05
Rpa1-202ENSMUST00000092907 Myt1lP97500 1187 aa14.7□□□□□ -0.06
Rpa1-202ENSMUST00000092907 Cep162Q6ZQ06 1403 aa14.7□□□□□ -0.06
Rpa1-202ENSMUST00000092907 Npm1Q61937 292 aaKnown RBP14.67□□□□□ -0.06
Rpa1-202ENSMUST00000092907 Zeb1Q64318 1117 aa14.66□□□□□ -0.06
Rpa1-202ENSMUST00000092907 Il27Q8K3I6 234 aa14.65□□□□□ -0.06
Rpa1-202ENSMUST00000092907 Ubl4bQ9CQ84 188 aa14.64□□□□□ -0.07
Rpa1-202ENSMUST00000092907 Thoc2B1AZI6 1594 aaKnown RBP14.61□□□□□ -0.07
Rpa1-202ENSMUST00000092907 NrkQ9R0G8 1455 aa14.61□□□□□ -0.07
Rpa1-202ENSMUST00000092907 Camsap1A2AHC3 1581 aa14.57□□□□□ -0.08
Rpa1-202ENSMUST00000092907 Fam135aQ6NS59 1506 aa14.56□□□□□ -0.08
Rpa1-202ENSMUST00000092907 Shroom4Q1W617 1475 aa14.55□□□□□ -0.08
Rpa1-202ENSMUST00000092907 Clip1Q922J3 1391 aa14.55□□□□□ -0.08
Rpa1-202ENSMUST00000092907 Map3k1P53349 1493 aa14.55□□□□□ -0.08
Rpa1-202ENSMUST00000092907 Cux2P70298 1426 aa14.53□□□□□ -0.08
Rpa1-202ENSMUST00000092907 Eea1Q8BL66 1411 aa14.5□□□□□ -0.09
Rpa1-202ENSMUST00000092907 Grin2bQ01097 1482 aa14.49□□□□□ -0.09
Rpa1-202ENSMUST00000092907 Unc13aQ4KUS2 1712 aa14.48□□□□□ -0.09
Rpa1-202ENSMUST00000092907 UbtfP25976 765 aaKnown RBP14.46□□□□□ -0.09
Rpa1-202ENSMUST00000092907 Efcab5A0JP43 1406 aa14.45□□□□□ -0.1
Rpa1-202ENSMUST00000092907 Arhgap35Q91YM2 1499 aa14.43□□□□□ -0.1
Rpa1-202ENSMUST00000092907 Mier1Q5UAK0 511 aa14.43□□□□□ -0.1
Rpa1-202ENSMUST00000092907 AqrQ8CFQ3 1481 aaKnown RBP14.43□□□□□ -0.1
Rpa1-202ENSMUST00000092907 LrpprcQ6PB66 1392 aaKnown RBP14.42□□□□□ -0.1
Rpa1-202ENSMUST00000092907 Las1lA2BE28 776 aaKnown RBP14.42□□□□□ -0.1
Rpa1-202ENSMUST00000092907 Eif4g1Q6NZJ6 1600 aaKnown RBP14.41□□□□□ -0.1
Rpa1-202ENSMUST00000092907 Setd5Q5XJV7 1441 aa14.39□□□□□ -0.11
Rpa1-202ENSMUST00000092907 Carmil1Q6EDY6 1374 aa14.37□□□□□ -0.11
Rpa1-202ENSMUST00000092907 PogzQ8BZH4 1409 aaKnown RBP14.36□□□□□ -0.11
Rpa1-202ENSMUST00000092907 Mroh2bQ7M6Y6 1581 aa14.35□□□□□ -0.11
Rpa1-202ENSMUST00000092907 Rpap1Q80TE0 1409 aa14.34□□□□□ -0.11
Rpa1-202ENSMUST00000092907 Polr1aO35134 1717 aaKnown RBP14.34□□□□□ -0.11
Rpa1-202ENSMUST00000092907 Mrc2Q64449 1479 aa14.32□□□□□ -0.12
Rpa1-202ENSMUST00000092907 PtprkP35822 1457 aa14.31□□□□□ -0.12
Rpa1-202ENSMUST00000092907 Duox2A2AQ99 1517 aa14.3□□□□□ -0.12
Rpa1-202ENSMUST00000092907 Dhx29Q6PGC1 1365 aaKnown RBP14.28□□□□□ -0.12
Rpa1-202ENSMUST00000092907 CntlnA2AM05 1397 aa14.25□□□□□ -0.13
Rpa1-202ENSMUST00000092907 Plekhg3Q4VAC9 1341 aa14.25□□□□□ -0.13
Rpa1-202ENSMUST00000092907 Fyco1Q8VDC1 1437 aa14.25□□□□□ -0.13
Rpa1-202ENSMUST00000092907 Arhgef5E9Q7D5 1581 aa14.24□□□□□ -0.13
Rpa1-202ENSMUST00000092907 Crocc2F6XLV1 1638 aa14.22□□□□□ -0.13
Rpa1-202ENSMUST00000092907 SynmQ70IV5 1561 aa14.22□□□□□ -0.13
Rpa1-202ENSMUST00000092907 Ap3b1Q9Z1T1 1105 aa14.22□□□□□ -0.13
Rpa1-202ENSMUST00000092907 Erich3F6QRE9 1637 aa14.2□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 350.7 ms