RNA–Protein interactions for RNA: ENSMUST00000077190.6

Cpne4-202, Transcript of Copine-4, mousemouse

TSL 1 (best) BASIC

Gene Cpne4, Length 3,409 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4-202ENSMUST00000077190 Rpgrip1Q9EPQ2 1331 aa9.42□□□□□ -0.9
Cpne4-202ENSMUST00000077190 NischQ80TM9 1593 aa9.35□□□□□ -0.91
Cpne4-202ENSMUST00000077190 Gm35339A0A140LHH9 1649 aa9.26□□□□□ -0.93
Cpne4-202ENSMUST00000077190 Abcc9P70170 1546 aa9.1□□□□□ -0.95
Cpne4-202ENSMUST00000077190 Pcgf6Q99NA9 353 aa9.02□□□□□ -0.97
Cpne4-202ENSMUST00000077190 Acin1Q9JIX8 1338 aaKnown RBP8.96□□□□□ -0.98
Cpne4-202ENSMUST00000077190 Abcc8B2RUS7 1588 aa8.89□□□□□ -0.99
Cpne4-202ENSMUST00000077190 Rtl1Q7M732 1744 aa8.87□□□□□ -0.99
Cpne4-202ENSMUST00000077190 Rhox8Q6VSS7 320 aa8.86□□□□□ -0.99
Cpne4-202ENSMUST00000077190 Ccdc180J3QNE4 1664 aa8.78□□□□□ -1
Cpne4-202ENSMUST00000077190 Myt1Q8CFC2 1127 aa8.77□□□□□ -1.01
Cpne4-202ENSMUST00000077190 Las1lA2BE28 776 aaKnown RBP8.71□□□□□ -1.01
Cpne4-202ENSMUST00000077190 Neurod1Q60867 357 aa8.67□□□□□ -1.02
Cpne4-202ENSMUST00000077190 CenpbP27790 599 aa8.65□□□□□ -1.02
Cpne4-202ENSMUST00000077190 Trim41Q5NCC3 630 aa8.65□□□□□ -1.03
Cpne4-202ENSMUST00000077190 DiexfQ8BTT6 772 aaKnown RBP8.64□□□□□ -1.03
Cpne4-202ENSMUST00000077190 1700123L14RikQ3V2K7 440 aa8.57□□□□□ -1.04
Cpne4-202ENSMUST00000077190 Supt5hO55201 1082 aaKnown RBP8.56□□□□□ -1.04
Cpne4-202ENSMUST00000077190 Ehmt2Q9Z148 1263 aaKnown RBP8.56□□□□□ -1.04
Cpne4-202ENSMUST00000077190 Dcaf1Q80TR8 1506 aa8.53□□□□□ -1.04
Cpne4-202ENSMUST00000077190 Bcl11aQ9QYE3 773 aa8.48□□□□□ -1.05
Cpne4-202ENSMUST00000077190 Anks4bQ8K3X6 423 aa8.41□□□□□ -1.06
Cpne4-202ENSMUST00000077190 Csrnp3P59055 597 aa8.38□□□□□ -1.07
Cpne4-202ENSMUST00000077190 Aplp2Q06335 707 aa8.37□□□□□ -1.07
Cpne4-202ENSMUST00000077190 Zcchc6Q5BLK4 1491 aaKnown RBP8.33□□□□□ -1.08
Cpne4-202ENSMUST00000077190 PrkcshO08795 521 aa8.25□□□□□ -1.09
Cpne4-202ENSMUST00000077190 ScribQ80U72 1612 aa8.24□□□□□ -1.09
Cpne4-202ENSMUST00000077190 HrcG5E8J6 738 aa8.21□□□□□ -1.1
Cpne4-202ENSMUST00000077190 Rb1cc1Q9ESK9 1588 aa8.19□□□□□ -1.1
Cpne4-202ENSMUST00000077190 Amer1Q7TS75 1132 aa8.19□□□□□ -1.1
Cpne4-202ENSMUST00000077190 Cngb1E1AZ71 1325 aa8.18□□□□□ -1.1
Cpne4-202ENSMUST00000077190 Ccdc136Q3TVA9 1136 aa8.17□□□□□ -1.1
Cpne4-202ENSMUST00000077190 Sall2Q9QX96 1004 aa8.15□□□□□ -1.1
Cpne4-202ENSMUST00000077190 NacadQ5SWP3 1504 aa8.14□□□□□ -1.11
Cpne4-202ENSMUST00000077190 Baz1aO88379 1555 aa8.13□□□□□ -1.11
Cpne4-202ENSMUST00000077190 Kdm5dQ62240 1548 aa8.12□□□□□ -1.11
Cpne4-202ENSMUST00000077190 Zeb1Q64318 1117 aa8.08□□□□□ -1.12
Cpne4-202ENSMUST00000077190 Crybg2B7ZCC2 1516 aa8.07□□□□□ -1.12
Cpne4-202ENSMUST00000077190 Ifnlr1Q8CGK5 535 aa8.06□□□□□ -1.12
Cpne4-202ENSMUST00000077190 NefmP08553 848 aa8.05□□□□□ -1.12
Cpne4-202ENSMUST00000077190 Fam71e1A1L3C1 212 aa8.04□□□□□ -1.12
Cpne4-202ENSMUST00000077190 Cdk11bP24788 784 aaKnown RBP8.03□□□□□ -1.12
Cpne4-202ENSMUST00000077190 Gm38655A0A286YDK6 273 aa8.02□□□□□ -1.13
Cpne4-202ENSMUST00000077190 Nop58Q6DFW4 536 aaKnown RBP7.97□□□□□ -1.13
Cpne4-202ENSMUST00000077190 Sycp2Q9CUU3 1500 aa7.93□□□□□ -1.14
Cpne4-202ENSMUST00000077190 Smarca2Q6DIC0 1577 aa7.92□□□□□ -1.14
Cpne4-202ENSMUST00000077190 Fgd1P52734 960 aa7.9□□□□□ -1.14
Cpne4-202ENSMUST00000077190 Rtl5Q5DTT4 599 aa7.9□□□□□ -1.14
Cpne4-202ENSMUST00000077190 Hdac5Q9Z2V6 1113 aa7.89□□□□□ -1.15
Cpne4-202ENSMUST00000077190 Gab3Q8BSM5 595 aa7.89□□□□□ -1.15
Cpne4-202ENSMUST00000077190 ClspnQ80YR7 1315 aa7.87□□□□□ -1.15
Cpne4-202ENSMUST00000077190 Mier1Q5UAK0 511 aa7.85□□□□□ -1.15
Cpne4-202ENSMUST00000077190 NrdcQ8BHG1 1161 aa7.85□□□□□ -1.15
Cpne4-202ENSMUST00000077190 Pknox2Q8BG99 474 aa7.84□□□□□ -1.15
Cpne4-202ENSMUST00000077190 Mapk8ip2Q9ERE9 830 aa7.84□□□□□ -1.16
Cpne4-202ENSMUST00000077190 Aebp2Q9Z248 504 aaKnown RBP7.84□□□□□ -1.16
Cpne4-202ENSMUST00000077190 SafbD3YXK2 937 aaKnown RBP7.81□□□□□ -1.16
Cpne4-202ENSMUST00000077190 Wdr66E9Q743 1299 aa7.81□□□□□ -1.16
Cpne4-202ENSMUST00000077190 Tnnt3Q9QZ47 272 aa7.81□□□□□ -1.16
Cpne4-202ENSMUST00000077190 Cep164Q5DU05 1446 aa7.79□□□□□ -1.16
Cpne4-202ENSMUST00000077190 Brd4Q9ESU6 1400 aaKnown RBP7.79□□□□□ -1.16
Cpne4-202ENSMUST00000077190 Hnrnpul2Q00PI9 745 aaKnown RBP7.79□□□□□ -1.16
Cpne4-202ENSMUST00000077190 Anp32aO35381 247 aa7.78□□□□□ -1.16
Cpne4-202ENSMUST00000077190 Ppargc1bQ8VHJ7 1014 aa7.77□□□□□ -1.17
Cpne4-202ENSMUST00000077190 Pelp1Q9DBD5 1123 aaKnown RBP7.73□□□□□ -1.17
Cpne4-202ENSMUST00000077190 Gtf3c3Q3TMP1 882 aa7.73□□□□□ -1.17
Cpne4-202ENSMUST00000077190 Chic1Q8CBW7 227 aa7.71□□□□□ -1.18
Cpne4-202ENSMUST00000077190 UbtfP25976 765 aaKnown RBP7.68□□□□□ -1.18
Cpne4-202ENSMUST00000077190 Upf2A2AT37 1269 aaKnown RBP7.68□□□□□ -1.18
Cpne4-202ENSMUST00000077190 Plcd4Q8K3R3 807 aa7.68□□□□□ -1.18
Cpne4-202ENSMUST00000077190 BicraF8VPZ9 1578 aa7.68□□□□□ -1.18
Cpne4-202ENSMUST00000077190 Ccdc9Q8VC31 543 aaKnown RBP7.66□□□□□ -1.18
Cpne4-202ENSMUST00000077190 Golga3P55937 1487 aa7.66□□□□□ -1.18
Cpne4-202ENSMUST00000077190 Nolc1E9Q5C9 702 aaKnown RBP7.65□□□□□ -1.18
Cpne4-202ENSMUST00000077190 Cecr2E9Q2Z1 1453 aa7.64□□□□□ -1.19
Cpne4-202ENSMUST00000077190 Il27Q8K3I6 234 aa7.64□□□□□ -1.19
Cpne4-202ENSMUST00000077190 Irx3P81067 507 aa7.63□□□□□ -1.19
Cpne4-202ENSMUST00000077190 CatipB9EKE5 520 aa7.62□□□□□ -1.19
Cpne4-202ENSMUST00000077190 Synj1Q8CHC4 1574 aa7.62□□□□□ -1.19
Cpne4-202ENSMUST00000077190 Supt16hQ920B9 1047 aa7.62□□□□□ -1.19
Cpne4-202ENSMUST00000077190 Cttnbp2B9EJA2 1648 aa7.62□□□□□ -1.19
Cpne4-202ENSMUST00000077190 Ipo4Q8VI75 1082 aa7.62□□□□□ -1.19
Cpne4-202ENSMUST00000077190 Rsf1E9PWW9 1441 aaKnown RBP7.61□□□□□ -1.19
Cpne4-202ENSMUST00000077190 CftrP26361 1476 aa7.61□□□□□ -1.19
Cpne4-202ENSMUST00000077190 Smarca4Q3TKT4 1613 aaKnown RBP7.59□□□□□ -1.19
Cpne4-202ENSMUST00000077190 Ccdc27Q3V036 639 aa7.59□□□□□ -1.19
Cpne4-202ENSMUST00000077190 Znf710Q3U288 666 aa7.58□□□□□ -1.2
Cpne4-202ENSMUST00000077190 Esf1Q3V1V3 845 aaKnown RBP7.55□□□□□ -1.2
Cpne4-202ENSMUST00000077190 TonslQ6NZL6 1363 aa7.55□□□□□ -1.2
Cpne4-202ENSMUST00000077190 Top2bQ64511 1612 aa7.55□□□□□ -1.2
Cpne4-202ENSMUST00000077190 Myt1lP97500 1187 aa7.54□□□□□ -1.2
Cpne4-202ENSMUST00000077190 Ttbk1Q6PCN3 1308 aa7.54□□□□□ -1.2
Cpne4-202ENSMUST00000077190 Kcnn1Q9EQR3 537 aa7.54□□□□□ -1.2
Cpne4-202ENSMUST00000077190 Ap3b1Q9Z1T1 1105 aa7.53□□□□□ -1.2
Cpne4-202ENSMUST00000077190 Ccdc88bQ4QRL3 1481 aa7.52□□□□□ -1.21
Cpne4-202ENSMUST00000077190 Calr4Q3TQS0 420 aa7.52□□□□□ -1.21
Cpne4-202ENSMUST00000077190 Gtf3c5Q8R2T8 520 aa7.5□□□□□ -1.21
Cpne4-202ENSMUST00000077190 BccipQ9CWI3 316 aa7.49□□□□□ -1.21
Cpne4-202ENSMUST00000077190 Fmn1Q05860 1466 aa7.49□□□□□ -1.21
Cpne4-202ENSMUST00000077190 Hsp90aa1P07901 733 aaKnown RBP7.49□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 77.9 ms