RNA–Protein interactions for RNA: ENSMUST00000071544.10

Snapc3-202, Transcript of snRNA-activating protein complex subunit 3, mousemouse

TSL 1 (best) BASIC

Gene Snapc3, Length 942 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Snapc3-202ENSMUST00000071544 Gm35339A0A140LHH9 1649 aa41.36■■■■■ 4.21
Snapc3-202ENSMUST00000071544 NischQ80TM9 1593 aa40.58■■■■■ 4.09
Snapc3-202ENSMUST00000071544 Abcc9P70170 1546 aa39.84■■■■□ 3.97
Snapc3-202ENSMUST00000071544 Abcc8B2RUS7 1588 aa39.52■■■■□ 3.92
Snapc3-202ENSMUST00000071544 ScribQ80U72 1612 aa38.65■■■■□ 3.78
Snapc3-202ENSMUST00000071544 NacadQ5SWP3 1504 aa37.33■■■■□ 3.57
Snapc3-202ENSMUST00000071544 Kdm5dQ62240 1548 aa37.17■■■■□ 3.54
Snapc3-202ENSMUST00000071544 Dnajc5bQ9CQ94 199 aa37.01■■■■□ 3.52
Snapc3-202ENSMUST00000071544 Sycp2Q9CUU3 1500 aa36.66■■■■□ 3.46
Snapc3-202ENSMUST00000071544 BicraF8VPZ9 1578 aa36.32■■■■□ 3.4
Snapc3-202ENSMUST00000071544 Dcaf1Q80TR8 1506 aa36.08■■■■□ 3.37
Snapc3-202ENSMUST00000071544 Pds5bQ4VA53 1446 aaKnown RBP35.52■■■■□ 3.28
Snapc3-202ENSMUST00000071544 Thoc2B1AZI6 1594 aaKnown RBP35.51■■■■□ 3.27
Snapc3-202ENSMUST00000071544 Rb1cc1Q9ESK9 1588 aa35.25■■■■□ 3.23
Snapc3-202ENSMUST00000071544 Atad2bE9Q166 1460 aaKnown RBP34.98■■■■□ 3.19
Snapc3-202ENSMUST00000071544 Cc2d2aQ8CFW7 1633 aa34.95■■■■□ 3.18
Snapc3-202ENSMUST00000071544 Ercc6F8VPZ5 1481 aa34.71■■■■□ 3.15
Snapc3-202ENSMUST00000071544 Crybg2B7ZCC2 1516 aa34.69■■■■□ 3.14
Snapc3-202ENSMUST00000071544 Baz1aO88379 1555 aa34.67■■■■□ 3.14
Snapc3-202ENSMUST00000071544 Fam135aQ6NS59 1506 aa34.5■■■■□ 3.11
Snapc3-202ENSMUST00000071544 Zcchc6Q5BLK4 1491 aaKnown RBP34.48■■■■□ 3.11
Snapc3-202ENSMUST00000071544 Smarca2Q6DIC0 1577 aa34.45■■■■□ 3.1
Snapc3-202ENSMUST00000071544 Dnajc5P60904 198 aa34.39■■■■□ 3.1
Snapc3-202ENSMUST00000071544 Rhox8Q6VSS7 320 aa34.34■■■■□ 3.09
Snapc3-202ENSMUST00000071544 Ccdc180J3QNE4 1664 aa34.31■■■■□ 3.08
Snapc3-202ENSMUST00000071544 Smarca4Q3TKT4 1613 aaKnown RBP34.25■■■■□ 3.07
Snapc3-202ENSMUST00000071544 Iqgap2Q3UQ44 1575 aa34.23■■■■□ 3.07
Snapc3-202ENSMUST00000071544 Phldb1Q6PDH0 1371 aaKnown RBP34.18■■■■□ 3.06
Snapc3-202ENSMUST00000071544 Frmpd1A2AKB4 1549 aa34.11■■■■□ 3.05
Snapc3-202ENSMUST00000071544 Wdr62Q3U3T8 1523 aa34.09■■■■□ 3.05
Snapc3-202ENSMUST00000071544 Ubl4bQ9CQ84 188 aa34.03■■■■□ 3.04
Snapc3-202ENSMUST00000071544 Cecr2E9Q2Z1 1453 aa34.02■■■■□ 3.04
Snapc3-202ENSMUST00000071544 Baz1bQ9Z277 1479 aa34■■■■□ 3.03
Snapc3-202ENSMUST00000071544 Trim41Q5NCC3 630 aa33.96■■■■□ 3.03
Snapc3-202ENSMUST00000071544 Mrc2Q64449 1479 aa33.76■■■■□ 3
Snapc3-202ENSMUST00000071544 Unc13aQ4KUS2 1712 aa33.42■■■□□ 2.94
Snapc3-202ENSMUST00000071544 Lrriq1Q0P5X1 1673 aa33.03■■■□□ 2.88
Snapc3-202ENSMUST00000071544 CftrP26361 1476 aa33.01■■■□□ 2.88
Snapc3-202ENSMUST00000071544 Rsf1E9PWW9 1441 aaKnown RBP32.99■■■□□ 2.87
Snapc3-202ENSMUST00000071544 Cttnbp2B9EJA2 1648 aa32.85■■■□□ 2.85
Snapc3-202ENSMUST00000071544 Cux2P70298 1426 aa32.82■■■□□ 2.84
Snapc3-202ENSMUST00000071544 Synj1Q8CHC4 1574 aa32.8■■■□□ 2.84
Snapc3-202ENSMUST00000071544 Shroom2A2ALU4 1481 aa32.76■■■□□ 2.84
Snapc3-202ENSMUST00000071544 Kif21aQ9QXL2 1672 aa32.65■■■□□ 2.82
Snapc3-202ENSMUST00000071544 Kif15Q6P9L6 1387 aa32.64■■■□□ 2.82
Snapc3-202ENSMUST00000071544 Brd4Q9ESU6 1400 aaKnown RBP32.62■■■□□ 2.81
Snapc3-202ENSMUST00000071544 Col17a1Q07563 1470 aa32.56■■■□□ 2.8
Snapc3-202ENSMUST00000071544 Eif4g3Q80XI3 1579 aaKnown RBP32.53■■■□□ 2.8
Snapc3-202ENSMUST00000071544 Esf1Q3V1V3 845 aaKnown RBP32.51■■■□□ 2.79
Snapc3-202ENSMUST00000071544 Npm1Q61937 292 aaKnown RBP32.47■■■□□ 2.79
Snapc3-202ENSMUST00000071544 Pabpn1Q8CCS6 302 aaKnown RBP32.41■■■□□ 2.78
Snapc3-202ENSMUST00000071544 Ccdc136Q3TVA9 1136 aa32.36■■■□□ 2.77
Snapc3-202ENSMUST00000071544 Urb2E9Q7L1 1524 aaKnown RBP32.21■■■□□ 2.75
Snapc3-202ENSMUST00000071544 Cep164Q5DU05 1446 aa32.19■■■□□ 2.74
Snapc3-202ENSMUST00000071544 Lamc3Q9R0B6 1581 aa32.18■■■□□ 2.74
Snapc3-202ENSMUST00000071544 Top2bQ64511 1612 aa32.18■■■□□ 2.74
Snapc3-202ENSMUST00000071544 Pelp1Q9DBD5 1123 aaKnown RBP32.14■■■□□ 2.74
Snapc3-202ENSMUST00000071544 Plb1Q3TTY0 1478 aa32.14■■■□□ 2.74
Snapc3-202ENSMUST00000071544 Dhx29Q6PGC1 1365 aaKnown RBP32.07■■■□□ 2.72
Snapc3-202ENSMUST00000071544 Rtl1Q7M732 1744 aa31.97■■■□□ 2.71
Snapc3-202ENSMUST00000071544 Il27Q8K3I6 234 aa31.96■■■□□ 2.71
Snapc3-202ENSMUST00000071544 Pcdh10E9PXQ7 1057 aa31.85■■■□□ 2.69
Snapc3-202ENSMUST00000071544 Zcchc11B2RX14 1644 aaKnown RBP31.85■■■□□ 2.69
Snapc3-202ENSMUST00000071544 LrpprcQ6PB66 1392 aaKnown RBP31.83■■■□□ 2.69
Snapc3-202ENSMUST00000071544 Ccdc18Q640L5 1455 aa31.78■■■□□ 2.68
Snapc3-202ENSMUST00000071544 Rusc2Q80U22 1514 aa31.77■■■□□ 2.68
Snapc3-202ENSMUST00000071544 Crocc2F6XLV1 1638 aa31.75■■■□□ 2.67
Snapc3-202ENSMUST00000071544 Ift140E9PY46 1464 aa31.72■■■□□ 2.67
Snapc3-202ENSMUST00000071544 PogzQ8BZH4 1409 aaKnown RBP31.53■■■□□ 2.64
Snapc3-202ENSMUST00000071544 Camsap1A2AHC3 1581 aa31.51■■■□□ 2.63
Snapc3-202ENSMUST00000071544 Ttbk1Q6PCN3 1308 aa31.5■■■□□ 2.63
Snapc3-202ENSMUST00000071544 TnnQ80Z71 1560 aa31.49■■■□□ 2.63
Snapc3-202ENSMUST00000071544 Arhgef5E9Q7D5 1581 aa31.48■■■□□ 2.63
Snapc3-202ENSMUST00000071544 Adgrl3Q80TS3 1537 aa31.48■■■□□ 2.63
Snapc3-202ENSMUST00000071544 Disp1Q3TDN0 1521 aa31.41■■■□□ 2.62
Snapc3-202ENSMUST00000071544 Duox2A2AQ99 1517 aa31.37■■■□□ 2.61
Snapc3-202ENSMUST00000071544 Gm156Q58A37 223 aa31.35■■■□□ 2.61
Snapc3-202ENSMUST00000071544 PtprkP35822 1457 aa31.34■■■□□ 2.61
Snapc3-202ENSMUST00000071544 Cc2d2bA0A286YDU8 1405 aa31.27■■■□□ 2.6
Snapc3-202ENSMUST00000071544 Golga3P55937 1487 aa31.27■■■□□ 2.6
Snapc3-202ENSMUST00000071544 Nup160Q9Z0W3 1402 aaKnown RBP31.25■■■□□ 2.59
Snapc3-202ENSMUST00000071544 PtprtQ99M80 1454 aa31.25■■■□□ 2.59
Snapc3-202ENSMUST00000071544 Cep170Q6A065 1588 aa31.22■■■□□ 2.59
Snapc3-202ENSMUST00000071544 Gapvd1Q6PAR5 1458 aa31.21■■■□□ 2.59
Snapc3-202ENSMUST00000071544 Cngb1E1AZ71 1325 aa31.18■■■□□ 2.58
Snapc3-202ENSMUST00000071544 Fgd6Q69ZL1 1399 aa31.14■■■□□ 2.58
Snapc3-202ENSMUST00000071544 Setd1bQ8CFT2 1985 aa31.08■■■□□ 2.57
Snapc3-202ENSMUST00000071544 Grin2bQ01097 1482 aa31.04■■■□□ 2.56
Snapc3-202ENSMUST00000071544 Samd9lQ69Z37 1561 aa31.04■■■□□ 2.56
Snapc3-202ENSMUST00000071544 Pbrm1Q8BSQ9 1634 aaKnown RBP31.03■■■□□ 2.56
Snapc3-202ENSMUST00000071544 Rad54l2Q99NG0 1466 aa30.97■■■□□ 2.55
Snapc3-202ENSMUST00000071544 AqrQ8CFQ3 1481 aaKnown RBP30.96■■■□□ 2.55
Snapc3-202ENSMUST00000071544 Fmn1Q05860 1466 aa30.95■■■□□ 2.55
Snapc3-202ENSMUST00000071544 Efcab5A0JP43 1406 aa30.92■■■□□ 2.54
Snapc3-202ENSMUST00000071544 AknaQ80VW7 1404 aa30.92■■■□□ 2.54
Snapc3-202ENSMUST00000071544 Ythdc2B2RR83 1445 aaKnown RBP30.9■■■□□ 2.54
Snapc3-202ENSMUST00000071544 Grin2aP35436 1464 aa30.89■■■□□ 2.53
Snapc3-202ENSMUST00000071544 Pprc1Q6NZN1 1644 aa30.88■■■□□ 2.53
Snapc3-202ENSMUST00000071544 Abcc1O35379 1528 aa30.86■■■□□ 2.53
Snapc3-202ENSMUST00000071544 Magi3Q9EQJ9 1476 aa30.83■■■□□ 2.53
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms