RNA–Protein interactions for RNA: ENSMUST00000070487.11

Cpsf4-201, Transcript of Cleavage and polyadenylation specificity factor subunit 4, mousemouse

TSL 1 (best) BASIC

Gene Cpsf4, Length 1,606 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4-201ENSMUST00000070487 Gm35339A0A140LHH9 1649 aa55.02■■■■■ 6.4
Cpsf4-201ENSMUST00000070487 NischQ80TM9 1593 aa54.5■■■■■ 6.31
Cpsf4-201ENSMUST00000070487 Abcc9P70170 1546 aa52.74■■■■■ 6.03
Cpsf4-201ENSMUST00000070487 Abcc8B2RUS7 1588 aa52.6■■■■■ 6.01
Cpsf4-201ENSMUST00000070487 ScribQ80U72 1612 aa50.44■■■■■ 5.67
Cpsf4-201ENSMUST00000070487 NacadQ5SWP3 1504 aa49.03■■■■■ 5.44
Cpsf4-201ENSMUST00000070487 Kdm5dQ62240 1548 aa48.9■■■■■ 5.42
Cpsf4-201ENSMUST00000070487 Dcaf1Q80TR8 1506 aa48.56■■■■■ 5.36
Cpsf4-201ENSMUST00000070487 Sycp2Q9CUU3 1500 aa48.03■■■■■ 5.28
Cpsf4-201ENSMUST00000070487 Rb1cc1Q9ESK9 1588 aa47.48■■■■■ 5.19
Cpsf4-201ENSMUST00000070487 Rhox8Q6VSS7 320 aa47.46■■■■■ 5.19
Cpsf4-201ENSMUST00000070487 BicraF8VPZ9 1578 aa47.26■■■■■ 5.16
Cpsf4-201ENSMUST00000070487 Ccdc180J3QNE4 1664 aa46.9■■■■■ 5.1
Cpsf4-201ENSMUST00000070487 Baz1aO88379 1555 aa46.88■■■■■ 5.09
Cpsf4-201ENSMUST00000070487 Crybg2B7ZCC2 1516 aa46.77■■■■■ 5.08
Cpsf4-201ENSMUST00000070487 Zcchc6Q5BLK4 1491 aaKnown RBP46.14■■■■■ 4.98
Cpsf4-201ENSMUST00000070487 Pds5bQ4VA53 1446 aaKnown RBP45.99■■■■■ 4.95
Cpsf4-201ENSMUST00000070487 Atad2bE9Q166 1460 aaKnown RBP45.6■■■■■ 4.89
Cpsf4-201ENSMUST00000070487 Dnajc5bQ9CQ94 199 aa45.53■■■■■ 4.88
Cpsf4-201ENSMUST00000070487 Smarca2Q6DIC0 1577 aa45.52■■■■■ 4.88
Cpsf4-201ENSMUST00000070487 Thoc2B1AZI6 1594 aaKnown RBP45.36■■■■■ 4.85
Cpsf4-201ENSMUST00000070487 Smarca4Q3TKT4 1613 aaKnown RBP45.29■■■■■ 4.84
Cpsf4-201ENSMUST00000070487 Cecr2E9Q2Z1 1453 aa45.26■■■■■ 4.84
Cpsf4-201ENSMUST00000070487 Rtl1Q7M732 1744 aa44.99■■■■■ 4.79
Cpsf4-201ENSMUST00000070487 Iqgap2Q3UQ44 1575 aa44.98■■■■■ 4.79
Cpsf4-201ENSMUST00000070487 Ercc6F8VPZ5 1481 aa44.97■■■■■ 4.79
Cpsf4-201ENSMUST00000070487 Cc2d2aQ8CFW7 1633 aa44.66■■■■■ 4.74
Cpsf4-201ENSMUST00000070487 Wdr62Q3U3T8 1523 aa44.56■■■■■ 4.72
Cpsf4-201ENSMUST00000070487 Frmpd1A2AKB4 1549 aa44.53■■■■■ 4.72
Cpsf4-201ENSMUST00000070487 Fam135aQ6NS59 1506 aa44.42■■■■■ 4.7
Cpsf4-201ENSMUST00000070487 Ccdc136Q3TVA9 1136 aa44.38■■■■■ 4.69
Cpsf4-201ENSMUST00000070487 Brd4Q9ESU6 1400 aaKnown RBP44.35■■■■■ 4.69
Cpsf4-201ENSMUST00000070487 CftrP26361 1476 aa44.34■■■■■ 4.69
Cpsf4-201ENSMUST00000070487 Phldb1Q6PDH0 1371 aaKnown RBP44.29■■■■■ 4.68
Cpsf4-201ENSMUST00000070487 Cttnbp2B9EJA2 1648 aa44.21■■■■■ 4.67
Cpsf4-201ENSMUST00000070487 Synj1Q8CHC4 1574 aa44.2■■■■■ 4.67
Cpsf4-201ENSMUST00000070487 Baz1bQ9Z277 1479 aa44.04■■■■■ 4.64
Cpsf4-201ENSMUST00000070487 Ubl4bQ9CQ84 188 aa43.89■■■■■ 4.62
Cpsf4-201ENSMUST00000070487 Trim41Q5NCC3 630 aa43.82■■■■■ 4.61
Cpsf4-201ENSMUST00000070487 Unc13aQ4KUS2 1712 aa43.8■■■■■ 4.6
Cpsf4-201ENSMUST00000070487 Esf1Q3V1V3 845 aaKnown RBP43.65■■■■■ 4.58
Cpsf4-201ENSMUST00000070487 Mrc2Q64449 1479 aa43.43■■■■■ 4.54
Cpsf4-201ENSMUST00000070487 Rsf1E9PWW9 1441 aaKnown RBP43.2■■■■■ 4.51
Cpsf4-201ENSMUST00000070487 Kif15Q6P9L6 1387 aa43.08■■■■■ 4.49
Cpsf4-201ENSMUST00000070487 Cux2P70298 1426 aa42.97■■■■■ 4.47
Cpsf4-201ENSMUST00000070487 Lamc3Q9R0B6 1581 aa42.95■■■■■ 4.47
Cpsf4-201ENSMUST00000070487 Golga3P55937 1487 aa42.87■■■■■ 4.45
Cpsf4-201ENSMUST00000070487 Top2bQ64511 1612 aa42.72■■■■■ 4.43
Cpsf4-201ENSMUST00000070487 Cngb1E1AZ71 1325 aa42.69■■■■■ 4.42
Cpsf4-201ENSMUST00000070487 Npm1Q61937 292 aaKnown RBP42.63■■■■■ 4.41
Cpsf4-201ENSMUST00000070487 TnnQ80Z71 1560 aa42.52■■■■■ 4.4
Cpsf4-201ENSMUST00000070487 Cep164Q5DU05 1446 aa42.46■■■■■ 4.39
Cpsf4-201ENSMUST00000070487 Kif21aQ9QXL2 1672 aa42.45■■■■■ 4.39
Cpsf4-201ENSMUST00000070487 Lrriq1Q0P5X1 1673 aa42.37■■■■■ 4.37
Cpsf4-201ENSMUST00000070487 Ccdc18Q640L5 1455 aa42.37■■■■■ 4.37
Cpsf4-201ENSMUST00000070487 Fmn1Q05860 1466 aa42.33■■■■■ 4.37
Cpsf4-201ENSMUST00000070487 Il27Q8K3I6 234 aa42.24■■■■■ 4.35
Cpsf4-201ENSMUST00000070487 Camsap1A2AHC3 1581 aa42.17■■■■■ 4.34
Cpsf4-201ENSMUST00000070487 LrpprcQ6PB66 1392 aaKnown RBP42.12■■■■■ 4.33
Cpsf4-201ENSMUST00000070487 Dhx29Q6PGC1 1365 aaKnown RBP42.1■■■■■ 4.33
Cpsf4-201ENSMUST00000070487 Urb2E9Q7L1 1524 aaKnown RBP41.89■■■■■ 4.3
Cpsf4-201ENSMUST00000070487 Plb1Q3TTY0 1478 aa41.87■■■■■ 4.29
Cpsf4-201ENSMUST00000070487 PogzQ8BZH4 1409 aaKnown RBP41.86■■■■■ 4.29
Cpsf4-201ENSMUST00000070487 Crocc2F6XLV1 1638 aa41.83■■■■■ 4.29
Cpsf4-201ENSMUST00000070487 Eif4g3Q80XI3 1579 aaKnown RBP41.8■■■■■ 4.28
Cpsf4-201ENSMUST00000070487 Ccdc88bQ4QRL3 1481 aa41.76■■■■■ 4.28
Cpsf4-201ENSMUST00000070487 Grin2bQ01097 1482 aa41.68■■■■■ 4.26
Cpsf4-201ENSMUST00000070487 Duox2A2AQ99 1517 aa41.67■■■■■ 4.26
Cpsf4-201ENSMUST00000070487 Ift140E9PY46 1464 aa41.56■■■■■ 4.24
Cpsf4-201ENSMUST00000070487 Chic1Q8CBW7 227 aa41.55■■■■■ 4.24
Cpsf4-201ENSMUST00000070487 Top2aQ01320 1528 aaKnown RBP41.53■■■■■ 4.24
Cpsf4-201ENSMUST00000070487 Efcab5A0JP43 1406 aa41.48■■■■■ 4.23
Cpsf4-201ENSMUST00000070487 NrkQ9R0G8 1455 aa41.35■■■■■ 4.21
Cpsf4-201ENSMUST00000070487 Disp1Q3TDN0 1521 aa41.29■■■■■ 4.2
Cpsf4-201ENSMUST00000070487 Rusc2Q80U22 1514 aa41.26■■■■■ 4.19
Cpsf4-201ENSMUST00000070487 Samd9lQ69Z37 1561 aa41.25■■■■■ 4.19
Cpsf4-201ENSMUST00000070487 Shroom2A2ALU4 1481 aa41.17■■■■■ 4.18
Cpsf4-201ENSMUST00000070487 HrcG5E8J6 738 aa41.14■■■■■ 4.18
Cpsf4-201ENSMUST00000070487 Shroom4Q1W617 1475 aa41.12■■■■■ 4.17
Cpsf4-201ENSMUST00000070487 Nup160Q9Z0W3 1402 aaKnown RBP41.1■■■■■ 4.17
Cpsf4-201ENSMUST00000070487 Pbrm1Q8BSQ9 1634 aaKnown RBP41.09■■■■■ 4.17
Cpsf4-201ENSMUST00000070487 PtprkP35822 1457 aa41.07■■■■■ 4.17
Cpsf4-201ENSMUST00000070487 Cc2d2bA0A286YDU8 1405 aa41.07■■■■■ 4.16
Cpsf4-201ENSMUST00000070487 Rad54l2Q99NG0 1466 aa41.03■■■■■ 4.16
Cpsf4-201ENSMUST00000070487 Dnajc5P60904 198 aa40.96■■■■■ 4.15
Cpsf4-201ENSMUST00000070487 Setd1bQ8CFT2 1985 aa40.94■■■■■ 4.14
Cpsf4-201ENSMUST00000070487 Grin2aP35436 1464 aa40.91■■■■■ 4.14
Cpsf4-201ENSMUST00000070487 Pabpn1Q8CCS6 302 aaKnown RBP40.9■■■■■ 4.14
Cpsf4-201ENSMUST00000070487 Magi3Q9EQJ9 1476 aa40.9■■■■■ 4.14
Cpsf4-201ENSMUST00000070487 SynmQ70IV5 1561 aa40.8■■■■■ 4.12
Cpsf4-201ENSMUST00000070487 Zeb1Q64318 1117 aa40.76■■■■■ 4.12
Cpsf4-201ENSMUST00000070487 AqrQ8CFQ3 1481 aaKnown RBP40.75■■■■■ 4.11
Cpsf4-201ENSMUST00000070487 Npm2Q80W85 207 aa40.74■■■■■ 4.11
Cpsf4-201ENSMUST00000070487 Pla2r1Q62028 1487 aa40.69■■■■■ 4.1
Cpsf4-201ENSMUST00000070487 Gpatch8A2A6A1 1505 aa40.65■■■■■ 4.1
Cpsf4-201ENSMUST00000070487 Pelp1Q9DBD5 1123 aaKnown RBP40.64■■■■■ 4.1
Cpsf4-201ENSMUST00000070487 Mroh2bQ7M6Y6 1581 aa40.62■■■■■ 4.09
Cpsf4-201ENSMUST00000070487 Fgd6Q69ZL1 1399 aa40.57■■■■■ 4.08
Cpsf4-201ENSMUST00000070487 Gab3Q8BSM5 595 aa40.56■■■■■ 4.08
Cpsf4-201ENSMUST00000070487 Col17a1Q07563 1470 aa40.5■■■■■ 4.07
Retrieved 100 of 22,080 RNA–protein pairs in 16.5 ms