RNA–Protein interactions for RNA: ENSMUST00000061973.4

Trex1-201, Transcript of Three-prime repair exonuclease 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trex1, Length 1,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1-201ENSMUST00000061973 Gm35339A0A140LHH9 1649 aa17.83■□□□□ 0.45
Trex1-201ENSMUST00000061973 NischQ80TM9 1593 aa17.57■□□□□ 0.4
Trex1-201ENSMUST00000061973 Abcc8B2RUS7 1588 aa17.02■□□□□ 0.31
Trex1-201ENSMUST00000061973 Abcc9P70170 1546 aa16.99■□□□□ 0.31
Trex1-201ENSMUST00000061973 ScribQ80U72 1612 aa16.5■□□□□ 0.23
Trex1-201ENSMUST00000061973 Kdm5dQ62240 1548 aa15.9■□□□□ 0.14
Trex1-201ENSMUST00000061973 NacadQ5SWP3 1504 aa15.88■□□□□ 0.13
Trex1-201ENSMUST00000061973 Sycp2Q9CUU3 1500 aa15.6■□□□□ 0.09
Trex1-201ENSMUST00000061973 Dcaf1Q80TR8 1506 aa15.58■□□□□ 0.09
Trex1-201ENSMUST00000061973 BicraF8VPZ9 1578 aa15.45■□□□□ 0.06
Trex1-201ENSMUST00000061973 Dnajc5bQ9CQ94 199 aa15.35■□□□□ 0.05
Trex1-201ENSMUST00000061973 Rb1cc1Q9ESK9 1588 aa15.31■□□□□ 0.04
Trex1-201ENSMUST00000061973 Rhox8Q6VSS7 320 aa15.1■□□□□ 0.01
Trex1-201ENSMUST00000061973 Baz1aO88379 1555 aa15.07■□□□□ 0
Trex1-201ENSMUST00000061973 Ccdc180J3QNE4 1664 aa15.04■□□□□ -0
Trex1-201ENSMUST00000061973 Crybg2B7ZCC2 1516 aa14.98□□□□□ -0.01
Trex1-201ENSMUST00000061973 Thoc2B1AZI6 1594 aaKnown RBP14.96□□□□□ -0.01
Trex1-201ENSMUST00000061973 Pds5bQ4VA53 1446 aaKnown RBP14.93□□□□□ -0.02
Trex1-201ENSMUST00000061973 Zcchc6Q5BLK4 1491 aaKnown RBP14.88□□□□□ -0.03
Trex1-201ENSMUST00000061973 Atad2bE9Q166 1460 aaKnown RBP14.79□□□□□ -0.04
Trex1-201ENSMUST00000061973 Cc2d2aQ8CFW7 1633 aa14.68□□□□□ -0.06
Trex1-201ENSMUST00000061973 Cecr2E9Q2Z1 1453 aa14.68□□□□□ -0.06
Trex1-201ENSMUST00000061973 Smarca4Q3TKT4 1613 aaKnown RBP14.66□□□□□ -0.06
Trex1-201ENSMUST00000061973 Smarca2Q6DIC0 1577 aa14.65□□□□□ -0.06
Trex1-201ENSMUST00000061973 Ercc6F8VPZ5 1481 aa14.62□□□□□ -0.07
Trex1-201ENSMUST00000061973 Iqgap2Q3UQ44 1575 aa14.61□□□□□ -0.07
Trex1-201ENSMUST00000061973 Fam135aQ6NS59 1506 aa14.51□□□□□ -0.09
Trex1-201ENSMUST00000061973 Frmpd1A2AKB4 1549 aa14.5□□□□□ -0.09
Trex1-201ENSMUST00000061973 Wdr62Q3U3T8 1523 aa14.5□□□□□ -0.09
Trex1-201ENSMUST00000061973 Rtl1Q7M732 1744 aa14.38□□□□□ -0.11
Trex1-201ENSMUST00000061973 Phldb1Q6PDH0 1371 aaKnown RBP14.37□□□□□ -0.11
Trex1-201ENSMUST00000061973 Unc13aQ4KUS2 1712 aa14.35□□□□□ -0.11
Trex1-201ENSMUST00000061973 Synj1Q8CHC4 1574 aa14.27□□□□□ -0.12
Trex1-201ENSMUST00000061973 CftrP26361 1476 aa14.27□□□□□ -0.12
Trex1-201ENSMUST00000061973 Ubl4bQ9CQ84 188 aa14.27□□□□□ -0.13
Trex1-201ENSMUST00000061973 Cttnbp2B9EJA2 1648 aa14.25□□□□□ -0.13
Trex1-201ENSMUST00000061973 Baz1bQ9Z277 1479 aa14.21□□□□□ -0.13
Trex1-201ENSMUST00000061973 Ccdc136Q3TVA9 1136 aa14.19□□□□□ -0.14
Trex1-201ENSMUST00000061973 Brd4Q9ESU6 1400 aaKnown RBP14.17□□□□□ -0.14
Trex1-201ENSMUST00000061973 Mrc2Q64449 1479 aa14.17□□□□□ -0.14
Trex1-201ENSMUST00000061973 Dnajc5P60904 198 aa14.1□□□□□ -0.15
Trex1-201ENSMUST00000061973 Trim41Q5NCC3 630 aa14.01□□□□□ -0.17
Trex1-201ENSMUST00000061973 Esf1Q3V1V3 845 aaKnown RBP13.99□□□□□ -0.17
Trex1-201ENSMUST00000061973 Cux2P70298 1426 aa13.94□□□□□ -0.18
Trex1-201ENSMUST00000061973 Lrriq1Q0P5X1 1673 aa13.93□□□□□ -0.18
Trex1-201ENSMUST00000061973 Kif15Q6P9L6 1387 aa13.92□□□□□ -0.18
Trex1-201ENSMUST00000061973 Rsf1E9PWW9 1441 aaKnown RBP13.9□□□□□ -0.18
Trex1-201ENSMUST00000061973 Kif21aQ9QXL2 1672 aa13.9□□□□□ -0.18
Trex1-201ENSMUST00000061973 Lamc3Q9R0B6 1581 aa13.87□□□□□ -0.19
Trex1-201ENSMUST00000061973 Npm1Q61937 292 aaKnown RBP13.75□□□□□ -0.21
Trex1-201ENSMUST00000061973 Top2bQ64511 1612 aa13.71□□□□□ -0.22
Trex1-201ENSMUST00000061973 TnnQ80Z71 1560 aa13.71□□□□□ -0.22
Trex1-201ENSMUST00000061973 Cep164Q5DU05 1446 aa13.7□□□□□ -0.22
Trex1-201ENSMUST00000061973 Eif4g3Q80XI3 1579 aaKnown RBP13.7□□□□□ -0.22
Trex1-201ENSMUST00000061973 Golga3P55937 1487 aa13.67□□□□□ -0.22
Trex1-201ENSMUST00000061973 Il27Q8K3I6 234 aa13.67□□□□□ -0.22
Trex1-201ENSMUST00000061973 Urb2E9Q7L1 1524 aaKnown RBP13.66□□□□□ -0.22
Trex1-201ENSMUST00000061973 Shroom2A2ALU4 1481 aa13.66□□□□□ -0.22
Trex1-201ENSMUST00000061973 Cngb1E1AZ71 1325 aa13.64□□□□□ -0.23
Trex1-201ENSMUST00000061973 Plb1Q3TTY0 1478 aa13.63□□□□□ -0.23
Trex1-201ENSMUST00000061973 Dhx29Q6PGC1 1365 aaKnown RBP13.63□□□□□ -0.23
Trex1-201ENSMUST00000061973 Camsap1A2AHC3 1581 aa13.62□□□□□ -0.23
Trex1-201ENSMUST00000061973 Ccdc18Q640L5 1455 aa13.61□□□□□ -0.23
Trex1-201ENSMUST00000061973 LrpprcQ6PB66 1392 aaKnown RBP13.58□□□□□ -0.23
Trex1-201ENSMUST00000061973 Crocc2F6XLV1 1638 aa13.58□□□□□ -0.24
Trex1-201ENSMUST00000061973 Col17a1Q07563 1470 aa13.55□□□□□ -0.24
Trex1-201ENSMUST00000061973 Fmn1Q05860 1466 aa13.52□□□□□ -0.25
Trex1-201ENSMUST00000061973 PogzQ8BZH4 1409 aaKnown RBP13.51□□□□□ -0.25
Trex1-201ENSMUST00000061973 Duox2A2AQ99 1517 aa13.45□□□□□ -0.26
Trex1-201ENSMUST00000061973 Rusc2Q80U22 1514 aa13.44□□□□□ -0.26
Trex1-201ENSMUST00000061973 Ift140E9PY46 1464 aa13.44□□□□□ -0.26
Trex1-201ENSMUST00000061973 Grin2bQ01097 1482 aa13.42□□□□□ -0.26
Trex1-201ENSMUST00000061973 Disp1Q3TDN0 1521 aa13.39□□□□□ -0.27
Trex1-201ENSMUST00000061973 Setd1bQ8CFT2 1985 aa13.38□□□□□ -0.27
Trex1-201ENSMUST00000061973 Samd9lQ69Z37 1561 aa13.38□□□□□ -0.27
Trex1-201ENSMUST00000061973 Pabpn1Q8CCS6 302 aaKnown RBP13.37□□□□□ -0.27
Trex1-201ENSMUST00000061973 Ccdc88bQ4QRL3 1481 aa13.36□□□□□ -0.27
Trex1-201ENSMUST00000061973 Pelp1Q9DBD5 1123 aaKnown RBP13.32□□□□□ -0.28
Trex1-201ENSMUST00000061973 Nup160Q9Z0W3 1402 aaKnown RBP13.31□□□□□ -0.28
Trex1-201ENSMUST00000061973 Rad54l2Q99NG0 1466 aa13.31□□□□□ -0.28
Trex1-201ENSMUST00000061973 Zcchc11B2RX14 1644 aaKnown RBP13.31□□□□□ -0.28
Trex1-201ENSMUST00000061973 Efcab5A0JP43 1406 aa13.3□□□□□ -0.28
Trex1-201ENSMUST00000061973 Pbrm1Q8BSQ9 1634 aaKnown RBP13.28□□□□□ -0.28
Trex1-201ENSMUST00000061973 Chic1Q8CBW7 227 aa13.27□□□□□ -0.29
Trex1-201ENSMUST00000061973 Top2aQ01320 1528 aaKnown RBP13.27□□□□□ -0.29
Trex1-201ENSMUST00000061973 Magi3Q9EQJ9 1476 aa13.26□□□□□ -0.29
Trex1-201ENSMUST00000061973 Cc2d2bA0A286YDU8 1405 aa13.25□□□□□ -0.29
Trex1-201ENSMUST00000061973 Grin2aP35436 1464 aa13.24□□□□□ -0.29
Trex1-201ENSMUST00000061973 PtprkP35822 1457 aa13.24□□□□□ -0.29
Trex1-201ENSMUST00000061973 NrkQ9R0G8 1455 aa13.22□□□□□ -0.29
Trex1-201ENSMUST00000061973 AqrQ8CFQ3 1481 aaKnown RBP13.2□□□□□ -0.3
Trex1-201ENSMUST00000061973 Shroom4Q1W617 1475 aa13.18□□□□□ -0.3
Trex1-201ENSMUST00000061973 Pla2r1Q62028 1487 aa13.16□□□□□ -0.3
Trex1-201ENSMUST00000061973 Pcdh10E9PXQ7 1057 aa13.16□□□□□ -0.3
Trex1-201ENSMUST00000061973 HrcG5E8J6 738 aa13.15□□□□□ -0.3
Trex1-201ENSMUST00000061973 Arhgef5E9Q7D5 1581 aa13.15□□□□□ -0.3
Trex1-201ENSMUST00000061973 Fgd6Q69ZL1 1399 aa13.14□□□□□ -0.31
Trex1-201ENSMUST00000061973 SynmQ70IV5 1561 aa13.14□□□□□ -0.31
Trex1-201ENSMUST00000061973 Adgrl3Q80TS3 1537 aa13.12□□□□□ -0.31
Trex1-201ENSMUST00000061973 Gpatch8A2A6A1 1505 aa13.11□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 47.2 ms