RNA–Protein interactions for RNA: ENSMUST00000060501.4

Cdkn2a-201, Transcript of Tumor suppressor ARF, mousemouse

TSL 1 (best) BASIC

Gene Cdkn2a, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2a-201ENSMUST00000060501 Gm35339A0A140LHH9 1649 aa45.23■■■■■ 4.83
Cdkn2a-201ENSMUST00000060501 NischQ80TM9 1593 aa44.47■■■■■ 4.71
Cdkn2a-201ENSMUST00000060501 Abcc8B2RUS7 1588 aa43.26■■■■■ 4.52
Cdkn2a-201ENSMUST00000060501 Abcc9P70170 1546 aa43.23■■■■■ 4.51
Cdkn2a-201ENSMUST00000060501 ScribQ80U72 1612 aa42.13■■■■■ 4.34
Cdkn2a-201ENSMUST00000060501 NacadQ5SWP3 1504 aa40.73■■■■■ 4.11
Cdkn2a-201ENSMUST00000060501 Kdm5dQ62240 1548 aa40.57■■■■■ 4.08
Cdkn2a-201ENSMUST00000060501 Sycp2Q9CUU3 1500 aa40■■■■□ 3.99
Cdkn2a-201ENSMUST00000060501 Dnajc5bQ9CQ94 199 aa39.98■■■■□ 3.99
Cdkn2a-201ENSMUST00000060501 BicraF8VPZ9 1578 aa39.59■■■■□ 3.93
Cdkn2a-201ENSMUST00000060501 Dcaf1Q80TR8 1506 aa39.52■■■■□ 3.92
Cdkn2a-201ENSMUST00000060501 Pds5bQ4VA53 1446 aaKnown RBP38.63■■■■□ 3.77
Cdkn2a-201ENSMUST00000060501 Rb1cc1Q9ESK9 1588 aa38.62■■■■□ 3.77
Cdkn2a-201ENSMUST00000060501 Thoc2B1AZI6 1594 aaKnown RBP38.53■■■■□ 3.76
Cdkn2a-201ENSMUST00000060501 Atad2bE9Q166 1460 aaKnown RBP38.11■■■■□ 3.69
Cdkn2a-201ENSMUST00000060501 Crybg2B7ZCC2 1516 aa38.07■■■■□ 3.68
Cdkn2a-201ENSMUST00000060501 Baz1aO88379 1555 aa38.02■■■■□ 3.68
Cdkn2a-201ENSMUST00000060501 Cc2d2aQ8CFW7 1633 aa37.91■■■■□ 3.66
Cdkn2a-201ENSMUST00000060501 Rhox8Q6VSS7 320 aa37.81■■■■□ 3.64
Cdkn2a-201ENSMUST00000060501 Zcchc6Q5BLK4 1491 aaKnown RBP37.71■■■■□ 3.63
Cdkn2a-201ENSMUST00000060501 Ercc6F8VPZ5 1481 aa37.71■■■■□ 3.63
Cdkn2a-201ENSMUST00000060501 Ccdc180J3QNE4 1664 aa37.7■■■■□ 3.63
Cdkn2a-201ENSMUST00000060501 Smarca2Q6DIC0 1577 aa37.56■■■■□ 3.6
Cdkn2a-201ENSMUST00000060501 Fam135aQ6NS59 1506 aa37.49■■■■□ 3.59
Cdkn2a-201ENSMUST00000060501 Smarca4Q3TKT4 1613 aaKnown RBP37.39■■■■□ 3.58
Cdkn2a-201ENSMUST00000060501 Iqgap2Q3UQ44 1575 aa37.33■■■■□ 3.57
Cdkn2a-201ENSMUST00000060501 Cecr2E9Q2Z1 1453 aa37.26■■■■□ 3.55
Cdkn2a-201ENSMUST00000060501 Phldb1Q6PDH0 1371 aaKnown RBP37.19■■■■□ 3.54
Cdkn2a-201ENSMUST00000060501 Frmpd1A2AKB4 1549 aa37.19■■■■□ 3.54
Cdkn2a-201ENSMUST00000060501 Wdr62Q3U3T8 1523 aa37.14■■■■□ 3.54
Cdkn2a-201ENSMUST00000060501 Ubl4bQ9CQ84 188 aa37.01■■■■□ 3.52
Cdkn2a-201ENSMUST00000060501 Baz1bQ9Z277 1479 aa36.95■■■■□ 3.51
Cdkn2a-201ENSMUST00000060501 Dnajc5P60904 198 aa36.87■■■■□ 3.49
Cdkn2a-201ENSMUST00000060501 Mrc2Q64449 1479 aa36.66■■■■□ 3.46
Cdkn2a-201ENSMUST00000060501 Trim41Q5NCC3 630 aa36.54■■■■□ 3.44
Cdkn2a-201ENSMUST00000060501 Unc13aQ4KUS2 1712 aa36.45■■■■□ 3.43
Cdkn2a-201ENSMUST00000060501 CftrP26361 1476 aa36.18■■■■□ 3.38
Cdkn2a-201ENSMUST00000060501 Synj1Q8CHC4 1574 aa35.98■■■■□ 3.35
Cdkn2a-201ENSMUST00000060501 Cttnbp2B9EJA2 1648 aa35.97■■■■□ 3.35
Cdkn2a-201ENSMUST00000060501 Lrriq1Q0P5X1 1673 aa35.84■■■■□ 3.33
Cdkn2a-201ENSMUST00000060501 Brd4Q9ESU6 1400 aaKnown RBP35.81■■■■□ 3.32
Cdkn2a-201ENSMUST00000060501 Rsf1E9PWW9 1441 aaKnown RBP35.79■■■■□ 3.32
Cdkn2a-201ENSMUST00000060501 Cux2P70298 1426 aa35.79■■■■□ 3.32
Cdkn2a-201ENSMUST00000060501 Kif15Q6P9L6 1387 aa35.64■■■■□ 3.3
Cdkn2a-201ENSMUST00000060501 Ccdc136Q3TVA9 1136 aa35.62■■■■□ 3.29
Cdkn2a-201ENSMUST00000060501 Esf1Q3V1V3 845 aaKnown RBP35.58■■■■□ 3.29
Cdkn2a-201ENSMUST00000060501 Kif21aQ9QXL2 1672 aa35.52■■■■□ 3.28
Cdkn2a-201ENSMUST00000060501 Shroom2A2ALU4 1481 aa35.43■■■■□ 3.26
Cdkn2a-201ENSMUST00000060501 Npm1Q61937 292 aaKnown RBP35.41■■■■□ 3.26
Cdkn2a-201ENSMUST00000060501 Eif4g3Q80XI3 1579 aaKnown RBP35.3■■■■□ 3.24
Cdkn2a-201ENSMUST00000060501 Rtl1Q7M732 1744 aa35.27■■■■□ 3.24
Cdkn2a-201ENSMUST00000060501 Lamc3Q9R0B6 1581 aa35.22■■■■□ 3.23
Cdkn2a-201ENSMUST00000060501 Col17a1Q07563 1470 aa35.18■■■■□ 3.22
Cdkn2a-201ENSMUST00000060501 Cep164Q5DU05 1446 aa35.12■■■■□ 3.21
Cdkn2a-201ENSMUST00000060501 Pabpn1Q8CCS6 302 aaKnown RBP35.09■■■■□ 3.21
Cdkn2a-201ENSMUST00000060501 Urb2E9Q7L1 1524 aaKnown RBP35.07■■■■□ 3.21
Cdkn2a-201ENSMUST00000060501 Plb1Q3TTY0 1478 aa35.03■■■■□ 3.2
Cdkn2a-201ENSMUST00000060501 Dhx29Q6PGC1 1365 aaKnown RBP34.98■■■■□ 3.19
Cdkn2a-201ENSMUST00000060501 Il27Q8K3I6 234 aa34.9■■■■□ 3.18
Cdkn2a-201ENSMUST00000060501 Top2bQ64511 1612 aa34.81■■■■□ 3.16
Cdkn2a-201ENSMUST00000060501 LrpprcQ6PB66 1392 aaKnown RBP34.78■■■■□ 3.16
Cdkn2a-201ENSMUST00000060501 Pelp1Q9DBD5 1123 aaKnown RBP34.76■■■■□ 3.16
Cdkn2a-201ENSMUST00000060501 Ccdc18Q640L5 1455 aa34.71■■■■□ 3.15
Cdkn2a-201ENSMUST00000060501 Crocc2F6XLV1 1638 aa34.63■■■■□ 3.13
Cdkn2a-201ENSMUST00000060501 Ift140E9PY46 1464 aa34.57■■■■□ 3.12
Cdkn2a-201ENSMUST00000060501 Rusc2Q80U22 1514 aa34.55■■■■□ 3.12
Cdkn2a-201ENSMUST00000060501 TnnQ80Z71 1560 aa34.53■■■■□ 3.12
Cdkn2a-201ENSMUST00000060501 Camsap1A2AHC3 1581 aa34.48■■■■□ 3.11
Cdkn2a-201ENSMUST00000060501 PogzQ8BZH4 1409 aaKnown RBP34.47■■■■□ 3.11
Cdkn2a-201ENSMUST00000060501 Zcchc11B2RX14 1644 aaKnown RBP34.45■■■■□ 3.11
Cdkn2a-201ENSMUST00000060501 Pcdh10E9PXQ7 1057 aa34.35■■■■□ 3.09
Cdkn2a-201ENSMUST00000060501 Disp1Q3TDN0 1521 aa34.31■■■■□ 3.08
Cdkn2a-201ENSMUST00000060501 Duox2A2AQ99 1517 aa34.3■■■■□ 3.08
Cdkn2a-201ENSMUST00000060501 Golga3P55937 1487 aa34.29■■■■□ 3.08
Cdkn2a-201ENSMUST00000060501 Cngb1E1AZ71 1325 aa34.26■■■■□ 3.07
Cdkn2a-201ENSMUST00000060501 Nup160Q9Z0W3 1402 aaKnown RBP34.12■■■■□ 3.05
Cdkn2a-201ENSMUST00000060501 Cc2d2bA0A286YDU8 1405 aa34.11■■■■□ 3.05
Cdkn2a-201ENSMUST00000060501 Adgrl3Q80TS3 1537 aa34.09■■■■□ 3.05
Cdkn2a-201ENSMUST00000060501 Gm156Q58A37 223 aa34.03■■■■□ 3.04
Cdkn2a-201ENSMUST00000060501 Grin2bQ01097 1482 aa34.01■■■■□ 3.03
Cdkn2a-201ENSMUST00000060501 Fmn1Q05860 1466 aa34.01■■■■□ 3.03
Cdkn2a-201ENSMUST00000060501 Arhgef5E9Q7D5 1581 aa34■■■■□ 3.03
Cdkn2a-201ENSMUST00000060501 PtprkP35822 1457 aa34■■■■□ 3.03
Cdkn2a-201ENSMUST00000060501 Ttbk1Q6PCN3 1308 aa34■■■■□ 3.03
Cdkn2a-201ENSMUST00000060501 Setd1bQ8CFT2 1985 aa33.97■■■■□ 3.03
Cdkn2a-201ENSMUST00000060501 Samd9lQ69Z37 1561 aa33.93■■■■□ 3.02
Cdkn2a-201ENSMUST00000060501 Fgd6Q69ZL1 1399 aa33.92■■■■□ 3.02
Cdkn2a-201ENSMUST00000060501 Efcab5A0JP43 1406 aa33.89■■■■□ 3.02
Cdkn2a-201ENSMUST00000060501 Gapvd1Q6PAR5 1458 aa33.88■■■■□ 3.01
Cdkn2a-201ENSMUST00000060501 Rad54l2Q99NG0 1466 aa33.86■■■■□ 3.01
Cdkn2a-201ENSMUST00000060501 Cep170Q6A065 1588 aa33.85■■■■□ 3.01
Cdkn2a-201ENSMUST00000060501 PtprtQ99M80 1454 aa33.85■■■■□ 3.01
Cdkn2a-201ENSMUST00000060501 Pbrm1Q8BSQ9 1634 aaKnown RBP33.84■■■■□ 3.01
Cdkn2a-201ENSMUST00000060501 AqrQ8CFQ3 1481 aaKnown RBP33.77■■■■□ 3
Cdkn2a-201ENSMUST00000060501 Grin2aP35436 1464 aa33.74■■■□□ 2.99
Cdkn2a-201ENSMUST00000060501 Magi3Q9EQJ9 1476 aa33.71■■■□□ 2.99
Cdkn2a-201ENSMUST00000060501 AknaQ80VW7 1404 aa33.62■■■□□ 2.97
Cdkn2a-201ENSMUST00000060501 Ythdc2B2RR83 1445 aaKnown RBP33.62■■■□□ 2.97
Cdkn2a-201ENSMUST00000060501 Abcc1O35379 1528 aa33.58■■■□□ 2.97
Cdkn2a-201ENSMUST00000060501 Pprc1Q6NZN1 1644 aa33.5■■■□□ 2.95
Retrieved 100 of 22,080 RNA–protein pairs in 10.2 ms