RNA–Protein interactions for RNA: ENSMUST00000055334.2

Hoxb3-201, Transcript of Homeobox protein Hox-B3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hoxb3, Length 1,890 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxb3-201ENSMUST00000055334 Gm35339A0A140LHH9 1649 aa50.1■■■■■ 5.61
Hoxb3-201ENSMUST00000055334 NischQ80TM9 1593 aa49.68■■■■■ 5.54
Hoxb3-201ENSMUST00000055334 Abcc9P70170 1546 aa48.09■■■■■ 5.29
Hoxb3-201ENSMUST00000055334 Abcc8B2RUS7 1588 aa47.84■■■■■ 5.25
Hoxb3-201ENSMUST00000055334 ScribQ80U72 1612 aa45.93■■■■■ 4.94
Hoxb3-201ENSMUST00000055334 Kdm5dQ62240 1548 aa44.51■■■■■ 4.72
Hoxb3-201ENSMUST00000055334 NacadQ5SWP3 1504 aa44.48■■■■■ 4.71
Hoxb3-201ENSMUST00000055334 Dcaf1Q80TR8 1506 aa44.09■■■■■ 4.65
Hoxb3-201ENSMUST00000055334 Sycp2Q9CUU3 1500 aa43.58■■■■■ 4.57
Hoxb3-201ENSMUST00000055334 Rhox8Q6VSS7 320 aa43.45■■■■■ 4.55
Hoxb3-201ENSMUST00000055334 Rb1cc1Q9ESK9 1588 aa43.38■■■■■ 4.53
Hoxb3-201ENSMUST00000055334 BicraF8VPZ9 1578 aa42.94■■■■■ 4.46
Hoxb3-201ENSMUST00000055334 Ccdc180J3QNE4 1664 aa42.78■■■■■ 4.44
Hoxb3-201ENSMUST00000055334 Baz1aO88379 1555 aa42.74■■■■■ 4.43
Hoxb3-201ENSMUST00000055334 Crybg2B7ZCC2 1516 aa42.39■■■■■ 4.38
Hoxb3-201ENSMUST00000055334 Zcchc6Q5BLK4 1491 aaKnown RBP42.1■■■■■ 4.33
Hoxb3-201ENSMUST00000055334 Pds5bQ4VA53 1446 aaKnown RBP41.6■■■■■ 4.25
Hoxb3-201ENSMUST00000055334 Smarca2Q6DIC0 1577 aa41.54■■■■■ 4.24
Hoxb3-201ENSMUST00000055334 Rtl1Q7M732 1744 aa41.46■■■■■ 4.23
Hoxb3-201ENSMUST00000055334 Atad2bE9Q166 1460 aaKnown RBP41.3■■■■■ 4.2
Hoxb3-201ENSMUST00000055334 Cecr2E9Q2Z1 1453 aa41.22■■■■■ 4.19
Hoxb3-201ENSMUST00000055334 Smarca4Q3TKT4 1613 aaKnown RBP41.21■■■■■ 4.19
Hoxb3-201ENSMUST00000055334 Thoc2B1AZI6 1594 aaKnown RBP41.13■■■■■ 4.17
Hoxb3-201ENSMUST00000055334 Dnajc5bQ9CQ94 199 aa41.08■■■■■ 4.17
Hoxb3-201ENSMUST00000055334 Iqgap2Q3UQ44 1575 aa40.94■■■■■ 4.14
Hoxb3-201ENSMUST00000055334 Ercc6F8VPZ5 1481 aa40.82■■■■■ 4.12
Hoxb3-201ENSMUST00000055334 Ccdc136Q3TVA9 1136 aa40.59■■■■■ 4.09
Hoxb3-201ENSMUST00000055334 Cc2d2aQ8CFW7 1633 aa40.54■■■■■ 4.08
Hoxb3-201ENSMUST00000055334 Wdr62Q3U3T8 1523 aa40.48■■■■■ 4.07
Hoxb3-201ENSMUST00000055334 Frmpd1A2AKB4 1549 aa40.41■■■■■ 4.06
Hoxb3-201ENSMUST00000055334 Brd4Q9ESU6 1400 aaKnown RBP40.38■■■■■ 4.05
Hoxb3-201ENSMUST00000055334 Synj1Q8CHC4 1574 aa40.38■■■■■ 4.05
Hoxb3-201ENSMUST00000055334 Cttnbp2B9EJA2 1648 aa40.36■■■■■ 4.05
Hoxb3-201ENSMUST00000055334 CftrP26361 1476 aa40.35■■■■■ 4.05
Hoxb3-201ENSMUST00000055334 Fam135aQ6NS59 1506 aa40.26■■■■■ 4.04
Hoxb3-201ENSMUST00000055334 Phldb1Q6PDH0 1371 aaKnown RBP40.05■■■■■ 4
Hoxb3-201ENSMUST00000055334 Unc13aQ4KUS2 1712 aa40.02■■■■■ 4
Hoxb3-201ENSMUST00000055334 Trim41Q5NCC3 630 aa39.89■■■■□ 3.98
Hoxb3-201ENSMUST00000055334 Esf1Q3V1V3 845 aaKnown RBP39.77■■■■□ 3.96
Hoxb3-201ENSMUST00000055334 Ubl4bQ9CQ84 188 aa39.71■■■■□ 3.95
Hoxb3-201ENSMUST00000055334 Baz1bQ9Z277 1479 aa39.69■■■■□ 3.94
Hoxb3-201ENSMUST00000055334 Mrc2Q64449 1479 aa39.35■■■■□ 3.89
Hoxb3-201ENSMUST00000055334 Rsf1E9PWW9 1441 aaKnown RBP39.24■■■■□ 3.87
Hoxb3-201ENSMUST00000055334 Kif15Q6P9L6 1387 aa39.16■■■■□ 3.86
Hoxb3-201ENSMUST00000055334 Golga3P55937 1487 aa39.13■■■■□ 3.85
Hoxb3-201ENSMUST00000055334 Lamc3Q9R0B6 1581 aa39.08■■■■□ 3.85
Hoxb3-201ENSMUST00000055334 Cngb1E1AZ71 1325 aa39.08■■■■□ 3.85
Hoxb3-201ENSMUST00000055334 Top2bQ64511 1612 aa39.08■■■■□ 3.85
Hoxb3-201ENSMUST00000055334 Cux2P70298 1426 aa39.01■■■■□ 3.84
Hoxb3-201ENSMUST00000055334 TnnQ80Z71 1560 aa38.79■■■■□ 3.8
Hoxb3-201ENSMUST00000055334 Kif21aQ9QXL2 1672 aa38.7■■■■□ 3.79
Hoxb3-201ENSMUST00000055334 Npm1Q61937 292 aaKnown RBP38.64■■■■□ 3.78
Hoxb3-201ENSMUST00000055334 Fmn1Q05860 1466 aa38.61■■■■□ 3.77
Hoxb3-201ENSMUST00000055334 Lrriq1Q0P5X1 1673 aa38.55■■■■□ 3.76
Hoxb3-201ENSMUST00000055334 Cep164Q5DU05 1446 aa38.54■■■■□ 3.76
Hoxb3-201ENSMUST00000055334 Ccdc18Q640L5 1455 aa38.53■■■■□ 3.76
Hoxb3-201ENSMUST00000055334 Il27Q8K3I6 234 aa38.5■■■■□ 3.75
Hoxb3-201ENSMUST00000055334 Camsap1A2AHC3 1581 aa38.48■■■■□ 3.75
Hoxb3-201ENSMUST00000055334 Ccdc88bQ4QRL3 1481 aa38.24■■■■□ 3.71
Hoxb3-201ENSMUST00000055334 LrpprcQ6PB66 1392 aaKnown RBP38.22■■■■□ 3.71
Hoxb3-201ENSMUST00000055334 Dhx29Q6PGC1 1365 aaKnown RBP38.22■■■■□ 3.71
Hoxb3-201ENSMUST00000055334 Crocc2F6XLV1 1638 aa38.12■■■■□ 3.69
Hoxb3-201ENSMUST00000055334 Urb2E9Q7L1 1524 aaKnown RBP38.03■■■■□ 3.68
Hoxb3-201ENSMUST00000055334 PogzQ8BZH4 1409 aaKnown RBP38.03■■■■□ 3.68
Hoxb3-201ENSMUST00000055334 Chic1Q8CBW7 227 aa38.01■■■■□ 3.68
Hoxb3-201ENSMUST00000055334 Plb1Q3TTY0 1478 aa38.01■■■■□ 3.67
Hoxb3-201ENSMUST00000055334 Top2aQ01320 1528 aaKnown RBP37.98■■■■□ 3.67
Hoxb3-201ENSMUST00000055334 Grin2bQ01097 1482 aa37.97■■■■□ 3.67
Hoxb3-201ENSMUST00000055334 Eif4g3Q80XI3 1579 aaKnown RBP37.96■■■■□ 3.67
Hoxb3-201ENSMUST00000055334 Duox2A2AQ99 1517 aa37.89■■■■□ 3.66
Hoxb3-201ENSMUST00000055334 Ift140E9PY46 1464 aa37.68■■■■□ 3.62
Hoxb3-201ENSMUST00000055334 Samd9lQ69Z37 1561 aa37.66■■■■□ 3.62
Hoxb3-201ENSMUST00000055334 Efcab5A0JP43 1406 aa37.63■■■■□ 3.61
Hoxb3-201ENSMUST00000055334 NrkQ9R0G8 1455 aa37.62■■■■□ 3.61
Hoxb3-201ENSMUST00000055334 HrcG5E8J6 738 aa37.6■■■■□ 3.61
Hoxb3-201ENSMUST00000055334 Shroom4Q1W617 1475 aa37.51■■■■□ 3.6
Hoxb3-201ENSMUST00000055334 PtprkP35822 1457 aa37.49■■■■□ 3.59
Hoxb3-201ENSMUST00000055334 Rusc2Q80U22 1514 aa37.49■■■■□ 3.59
Hoxb3-201ENSMUST00000055334 Disp1Q3TDN0 1521 aa37.48■■■■□ 3.59
Hoxb3-201ENSMUST00000055334 Setd1bQ8CFT2 1985 aa37.43■■■■□ 3.58
Hoxb3-201ENSMUST00000055334 Pbrm1Q8BSQ9 1634 aaKnown RBP37.41■■■■□ 3.58
Hoxb3-201ENSMUST00000055334 Rad54l2Q99NG0 1466 aa37.38■■■■□ 3.57
Hoxb3-201ENSMUST00000055334 Nup160Q9Z0W3 1402 aaKnown RBP37.29■■■■□ 3.56
Hoxb3-201ENSMUST00000055334 Gab3Q8BSM5 595 aa37.24■■■■□ 3.55
Hoxb3-201ENSMUST00000055334 Grin2aP35436 1464 aa37.24■■■■□ 3.55
Hoxb3-201ENSMUST00000055334 Npm2Q80W85 207 aa37.24■■■■□ 3.55
Hoxb3-201ENSMUST00000055334 Magi3Q9EQJ9 1476 aa37.23■■■■□ 3.55
Hoxb3-201ENSMUST00000055334 Zeb1Q64318 1117 aa37.22■■■■□ 3.55
Hoxb3-201ENSMUST00000055334 SynmQ70IV5 1561 aa37.21■■■■□ 3.55
Hoxb3-201ENSMUST00000055334 Cc2d2bA0A286YDU8 1405 aa37.2■■■■□ 3.55
Hoxb3-201ENSMUST00000055334 Shroom2A2ALU4 1481 aa37.13■■■■□ 3.53
Hoxb3-201ENSMUST00000055334 Pla2r1Q62028 1487 aa37.07■■■■□ 3.53
Hoxb3-201ENSMUST00000055334 Rapgef2Q8CHG7 1496 aa37.03■■■■□ 3.52
Hoxb3-201ENSMUST00000055334 Mroh2bQ7M6Y6 1581 aa37.02■■■■□ 3.52
Hoxb3-201ENSMUST00000055334 AqrQ8CFQ3 1481 aaKnown RBP37.02■■■■□ 3.52
Hoxb3-201ENSMUST00000055334 Gpatch8A2A6A1 1505 aa36.95■■■■□ 3.51
Hoxb3-201ENSMUST00000055334 Pabpn1Q8CCS6 302 aaKnown RBP36.88■■■■□ 3.49
Hoxb3-201ENSMUST00000055334 Arhgap35Q91YM2 1499 aa36.85■■■■□ 3.49
Hoxb3-201ENSMUST00000055334 Pelp1Q9DBD5 1123 aaKnown RBP36.85■■■■□ 3.49
Hoxb3-201ENSMUST00000055334 Map3k1P53349 1493 aa36.77■■■■□ 3.48
Retrieved 100 of 22,080 RNA–protein pairs in 39.8 ms