RNA–Protein interactions for RNA: ENSMUST00000055296.10

Polr1a-201, Transcript of DNA-directed RNA polymerase I subunit RPA1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Polr1a, Length 9,216 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Polr1a-201ENSMUST00000055296 Rhox8Q6VSS7 320 aa15□□□□□ -0.01
Polr1a-201ENSMUST00000055296 Pelp1Q9DBD5 1123 aaKnown RBP14.31□□□□□ -0.12
Polr1a-201ENSMUST00000055296 Cngb1E1AZ71 1325 aa14.31□□□□□ -0.12
Polr1a-201ENSMUST00000055296 Rpgrip1Q9EPQ2 1331 aa14.14□□□□□ -0.15
Polr1a-201ENSMUST00000055296 Amer1Q7TS75 1132 aa14.08□□□□□ -0.16
Polr1a-201ENSMUST00000055296 Las1lA2BE28 776 aaKnown RBP14.05□□□□□ -0.16
Polr1a-201ENSMUST00000055296 Ehmt2Q9Z148 1263 aaKnown RBP13.89□□□□□ -0.19
Polr1a-201ENSMUST00000055296 Wdr66E9Q743 1299 aa13.88□□□□□ -0.19
Polr1a-201ENSMUST00000055296 Ube2uB1AUC4 352 aa13.86□□□□□ -0.19
Polr1a-201ENSMUST00000055296 4930567H17RikQ3V0K5 233 aa13.68□□□□□ -0.22
Polr1a-201ENSMUST00000055296 Zeb1Q64318 1117 aa13.54□□□□□ -0.24
Polr1a-201ENSMUST00000055296 Ttbk1Q6PCN3 1308 aa13.4□□□□□ -0.26
Polr1a-201ENSMUST00000055296 CenpbP27790 599 aa13.29□□□□□ -0.28
Polr1a-201ENSMUST00000055296 Esf1Q3V1V3 845 aaKnown RBP13.28□□□□□ -0.28
Polr1a-201ENSMUST00000055296 Slc24a1Q91WD8 1130 aa13.24□□□□□ -0.29
Polr1a-201ENSMUST00000055296 Npm2Q80W85 207 aa13.17□□□□□ -0.3
Polr1a-201ENSMUST00000055296 4933416C03RikQ3V063 378 aa13.17□□□□□ -0.3
Polr1a-201ENSMUST00000055296 Gab3Q8BSM5 595 aa13.1□□□□□ -0.31
Polr1a-201ENSMUST00000055296 Myt1Q8CFC2 1127 aa13.09□□□□□ -0.31
Polr1a-201ENSMUST00000055296 Myt1lP97500 1187 aa13.06□□□□□ -0.32
Polr1a-201ENSMUST00000055296 Stra8P70278 393 aa13.05□□□□□ -0.32
Polr1a-201ENSMUST00000055296 Ccdc136Q3TVA9 1136 aa13.02□□□□□ -0.32
Polr1a-201ENSMUST00000055296 NischQ80TM9 1593 aa12.93□□□□□ -0.34
Polr1a-201ENSMUST00000055296 NeflP08551 543 aa12.85□□□□□ -0.35
Polr1a-201ENSMUST00000055296 UbtfP25976 765 aaKnown RBP12.73□□□□□ -0.37
Polr1a-201ENSMUST00000055296 Eif5bQ05D44 1216 aaKnown RBP12.72□□□□□ -0.37
Polr1a-201ENSMUST00000055296 NrdcQ8BHG1 1161 aa12.71□□□□□ -0.37
Polr1a-201ENSMUST00000055296 Os9Q8K2C7 672 aa12.7□□□□□ -0.38
Polr1a-201ENSMUST00000055296 Anp32bQ9EST5 272 aaKnown RBP12.7□□□□□ -0.38
Polr1a-201ENSMUST00000055296 Rtl1Q7M732 1744 aa12.65□□□□□ -0.38
Polr1a-201ENSMUST00000055296 Neurod1Q60867 357 aa12.63□□□□□ -0.39
Polr1a-201ENSMUST00000055296 NefmP08553 848 aa12.57□□□□□ -0.4
Polr1a-201ENSMUST00000055296 Trim41Q5NCC3 630 aa12.57□□□□□ -0.4
Polr1a-201ENSMUST00000055296 CatipB9EKE5 520 aa12.56□□□□□ -0.4
Polr1a-201ENSMUST00000055296 Cdk11bP24788 784 aaKnown RBP12.54□□□□□ -0.4
Polr1a-201ENSMUST00000055296 HrcG5E8J6 738 aa12.49□□□□□ -0.41
Polr1a-201ENSMUST00000055296 Tnnt3Q9QZ47 272 aa12.47□□□□□ -0.41
Polr1a-201ENSMUST00000055296 NclP09405 707 aaKnown RBP12.45□□□□□ -0.42
Polr1a-201ENSMUST00000055296 Rtl5Q5DTT4 599 aa12.4□□□□□ -0.42
Polr1a-201ENSMUST00000055296 DaxxO35613 739 aa12.4□□□□□ -0.42
Polr1a-201ENSMUST00000055296 Fam50aQ9WV03 339 aaKnown RBP12.4□□□□□ -0.42
Polr1a-201ENSMUST00000055296 Chic1Q8CBW7 227 aa12.39□□□□□ -0.43
Polr1a-201ENSMUST00000055296 Acin1Q9JIX8 1338 aaKnown RBP12.38□□□□□ -0.43
Polr1a-201ENSMUST00000055296 Ccdc180J3QNE4 1664 aa12.38□□□□□ -0.43
Polr1a-201ENSMUST00000055296 Ppargc1bQ8VHJ7 1014 aa12.32□□□□□ -0.44
Polr1a-201ENSMUST00000055296 Ythdc1E9Q5K9 736 aaKnown RBP12.31□□□□□ -0.44
Polr1a-201ENSMUST00000055296 Nop58Q6DFW4 536 aaKnown RBP12.31□□□□□ -0.44
Polr1a-201ENSMUST00000055296 Il27Q8K3I6 234 aa12.31□□□□□ -0.44
Polr1a-201ENSMUST00000055296 DiexfQ8BTT6 772 aaKnown RBP12.3□□□□□ -0.44
Polr1a-201ENSMUST00000055296 Abcc9P70170 1546 aa12.3□□□□□ -0.44
Polr1a-201ENSMUST00000055296 ArxO35085 564 aa12.3□□□□□ -0.44
Polr1a-201ENSMUST00000055296 Ap3b1Q9Z1T1 1105 aa12.3□□□□□ -0.44
Polr1a-201ENSMUST00000055296 Gm13697A2AK42 830 aa12.28□□□□□ -0.44
Polr1a-201ENSMUST00000055296 Lmod3E9QA62 571 aa12.27□□□□□ -0.44
Polr1a-201ENSMUST00000055296 Gm35339A0A140LHH9 1649 aa12.27□□□□□ -0.45
Polr1a-201ENSMUST00000055296 Zbtb7cQ8VCZ7 619 aa12.22□□□□□ -0.45
Polr1a-201ENSMUST00000055296 Polr3glQ8R0C0 218 aa12.22□□□□□ -0.45
Polr1a-201ENSMUST00000055296 Hsp90aa1P07901 733 aaKnown RBP12.18□□□□□ -0.46
Polr1a-201ENSMUST00000055296 Upf2A2AT37 1269 aaKnown RBP12.17□□□□□ -0.46
Polr1a-201ENSMUST00000055296 Nlrp6Q91WS2 869 aa12.14□□□□□ -0.47
Polr1a-201ENSMUST00000055296 Atp1b4Q99ME6 356 aa12.13□□□□□ -0.47
Polr1a-201ENSMUST00000055296 Prdm10Q3UTQ7 1184 aa12.12□□□□□ -0.47
Polr1a-201ENSMUST00000055296 Zbtb4Q5F293 982 aa12.1□□□□□ -0.47
Polr1a-201ENSMUST00000055296 Hnrnpul2Q00PI9 745 aaKnown RBP12.09□□□□□ -0.47
Polr1a-201ENSMUST00000055296 Gm13695A2AK44 830 aa12.05□□□□□ -0.48
Polr1a-201ENSMUST00000055296 Pcgf6Q99NA9 353 aa12.05□□□□□ -0.48
Polr1a-201ENSMUST00000055296 TonslQ6NZL6 1363 aa12.03□□□□□ -0.48
Polr1a-201ENSMUST00000055296 Erich6D3Z6S9 713 aa12.02□□□□□ -0.48
Polr1a-201ENSMUST00000055296 Anp32aO35381 247 aa12.01□□□□□ -0.49
Polr1a-201ENSMUST00000055296 Rangap1P46061 589 aaKnown RBP12.01□□□□□ -0.49
Polr1a-201ENSMUST00000055296 Zcchc6Q5BLK4 1491 aaKnown RBP11.98□□□□□ -0.49
Polr1a-201ENSMUST00000055296 Vsig10D3YX43 558 aa11.98□□□□□ -0.49
Polr1a-201ENSMUST00000055296 DekQ7TNV0 380 aaKnown RBP11.97□□□□□ -0.49
Polr1a-201ENSMUST00000055296 Ifnlr1Q8CGK5 535 aa11.97□□□□□ -0.49
Polr1a-201ENSMUST00000055296 Plppr3Q7TPB0 716 aa11.96□□□□□ -0.5
Polr1a-201ENSMUST00000055296 Znf326O88291 580 aa11.95□□□□□ -0.5
Polr1a-201ENSMUST00000055296 Csrnp3P59055 597 aa11.89□□□□□ -0.51
Polr1a-201ENSMUST00000055296 Supt5hO55201 1082 aaKnown RBP11.86□□□□□ -0.51
Polr1a-201ENSMUST00000055296 Ccdc9Q8VC31 543 aaKnown RBP11.82□□□□□ -0.52
Polr1a-201ENSMUST00000055296 Gm38655A0A286YDK6 273 aa11.79□□□□□ -0.52
Polr1a-201ENSMUST00000055296 Trim44Q9QXA7 346 aa11.79□□□□□ -0.52
Polr1a-201ENSMUST00000055296 Mapk8ip2Q9ERE9 830 aa11.78□□□□□ -0.52
Polr1a-201ENSMUST00000055296 Lmod2Q3UHZ5 550 aa11.74□□□□□ -0.53
Polr1a-201ENSMUST00000055296 Fgd1P52734 960 aa11.73□□□□□ -0.53
Polr1a-201ENSMUST00000055296 Clstn1Q9EPL2 979 aa11.71□□□□□ -0.53
Polr1a-201ENSMUST00000055296 PtmaP26350 111 aa11.7□□□□□ -0.54
Polr1a-201ENSMUST00000055296 Slc4a1apE9PX68 744 aa11.69□□□□□ -0.54
Polr1a-201ENSMUST00000055296 Hdac5Q9Z2V6 1113 aa11.69□□□□□ -0.54
Polr1a-201ENSMUST00000055296 Znf316Q6PGE4 1016 aa11.68□□□□□ -0.54
Polr1a-201ENSMUST00000055296 Arid4bA2CG63 1314 aaKnown RBP11.68□□□□□ -0.54
Polr1a-201ENSMUST00000055296 Rad21Q61550 635 aaKnown RBP11.67□□□□□ -0.54
Polr1a-201ENSMUST00000055296 Ppp4r2Q0VGB7 417 aa11.66□□□□□ -0.54
Polr1a-201ENSMUST00000055296 Prm3Q62100 101 aa11.66□□□□□ -0.54
Polr1a-201ENSMUST00000055296 Irx6Q9ER75 438 aa11.66□□□□□ -0.54
Polr1a-201ENSMUST00000055296 Abcc8B2RUS7 1588 aa11.66□□□□□ -0.54
Polr1a-201ENSMUST00000055296 BccipQ9CWI3 316 aa11.65□□□□□ -0.54
Polr1a-201ENSMUST00000055296 PnnO35691 725 aaKnown RBP11.65□□□□□ -0.55
Polr1a-201ENSMUST00000055296 ClspnQ80YR7 1315 aa11.64□□□□□ -0.55
Polr1a-201ENSMUST00000055296 Mier1Q5UAK0 511 aa11.62□□□□□ -0.55
Polr1a-201ENSMUST00000055296 Trim26Q99PN3 545 aa11.62□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 90.6 ms