RNA–Protein interactions for RNA: ENSMUST00000054895.3

Ssc4d-201, Transcript of Scavenger receptor cysteine-rich domain-containing group B protein, mousemouse

TSL 1 (best) BASIC

Gene Ssc4d, Length 1,191 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssc4d-201ENSMUST00000054895 Gm35339A0A140LHH9 1649 aa28.32■■■□□ 2.12
Ssc4d-201ENSMUST00000054895 NischQ80TM9 1593 aa27.9■■■□□ 2.06
Ssc4d-201ENSMUST00000054895 Abcc9P70170 1546 aa27.31■■□□□ 1.96
Ssc4d-201ENSMUST00000054895 Abcc8B2RUS7 1588 aa27.1■■□□□ 1.93
Ssc4d-201ENSMUST00000054895 ScribQ80U72 1612 aa26.44■■□□□ 1.82
Ssc4d-201ENSMUST00000054895 NacadQ5SWP3 1504 aa25.57■■□□□ 1.68
Ssc4d-201ENSMUST00000054895 Kdm5dQ62240 1548 aa25.47■■□□□ 1.67
Ssc4d-201ENSMUST00000054895 Dnajc5bQ9CQ94 199 aa25.23■■□□□ 1.63
Ssc4d-201ENSMUST00000054895 Sycp2Q9CUU3 1500 aa25.09■■□□□ 1.61
Ssc4d-201ENSMUST00000054895 BicraF8VPZ9 1578 aa24.84■■□□□ 1.57
Ssc4d-201ENSMUST00000054895 Dcaf1Q80TR8 1506 aa24.74■■□□□ 1.55
Ssc4d-201ENSMUST00000054895 Pds5bQ4VA53 1446 aaKnown RBP24.29■■□□□ 1.48
Ssc4d-201ENSMUST00000054895 Rb1cc1Q9ESK9 1588 aa24.26■■□□□ 1.47
Ssc4d-201ENSMUST00000054895 Thoc2B1AZI6 1594 aaKnown RBP24.21■■□□□ 1.47
Ssc4d-201ENSMUST00000054895 Rhox8Q6VSS7 320 aa24.11■■□□□ 1.45
Ssc4d-201ENSMUST00000054895 Atad2bE9Q166 1460 aaKnown RBP23.94■■□□□ 1.42
Ssc4d-201ENSMUST00000054895 Ccdc180J3QNE4 1664 aa23.93■■□□□ 1.42
Ssc4d-201ENSMUST00000054895 Cc2d2aQ8CFW7 1633 aa23.91■■□□□ 1.42
Ssc4d-201ENSMUST00000054895 Baz1aO88379 1555 aa23.89■■□□□ 1.41
Ssc4d-201ENSMUST00000054895 Crybg2B7ZCC2 1516 aa23.79■■□□□ 1.4
Ssc4d-201ENSMUST00000054895 Ercc6F8VPZ5 1481 aa23.78■■□□□ 1.4
Ssc4d-201ENSMUST00000054895 Zcchc6Q5BLK4 1491 aaKnown RBP23.75■■□□□ 1.39
Ssc4d-201ENSMUST00000054895 Smarca2Q6DIC0 1577 aa23.6■■□□□ 1.37
Ssc4d-201ENSMUST00000054895 Fam135aQ6NS59 1506 aa23.54■■□□□ 1.36
Ssc4d-201ENSMUST00000054895 Smarca4Q3TKT4 1613 aaKnown RBP23.5■■□□□ 1.35
Ssc4d-201ENSMUST00000054895 Iqgap2Q3UQ44 1575 aa23.46■■□□□ 1.35
Ssc4d-201ENSMUST00000054895 Phldb1Q6PDH0 1371 aaKnown RBP23.39■■□□□ 1.33
Ssc4d-201ENSMUST00000054895 Ubl4bQ9CQ84 188 aa23.37■■□□□ 1.33
Ssc4d-201ENSMUST00000054895 Cecr2E9Q2Z1 1453 aa23.36■■□□□ 1.33
Ssc4d-201ENSMUST00000054895 Frmpd1A2AKB4 1549 aa23.35■■□□□ 1.33
Ssc4d-201ENSMUST00000054895 Dnajc5P60904 198 aa23.33■■□□□ 1.33
Ssc4d-201ENSMUST00000054895 Wdr62Q3U3T8 1523 aa23.32■■□□□ 1.32
Ssc4d-201ENSMUST00000054895 Trim41Q5NCC3 630 aa23.26■■□□□ 1.31
Ssc4d-201ENSMUST00000054895 Baz1bQ9Z277 1479 aa23.13■■□□□ 1.29
Ssc4d-201ENSMUST00000054895 Mrc2Q64449 1479 aa23.08■■□□□ 1.29
Ssc4d-201ENSMUST00000054895 Rtl1Q7M732 1744 aa23■■□□□ 1.27
Ssc4d-201ENSMUST00000054895 Unc13aQ4KUS2 1712 aa22.95■■□□□ 1.26
Ssc4d-201ENSMUST00000054895 CftrP26361 1476 aa22.66■■□□□ 1.22
Ssc4d-201ENSMUST00000054895 Lrriq1Q0P5X1 1673 aa22.62■■□□□ 1.21
Ssc4d-201ENSMUST00000054895 Cttnbp2B9EJA2 1648 aa22.59■■□□□ 1.21
Ssc4d-201ENSMUST00000054895 Synj1Q8CHC4 1574 aa22.58■■□□□ 1.2
Ssc4d-201ENSMUST00000054895 Brd4Q9ESU6 1400 aaKnown RBP22.56■■□□□ 1.2
Ssc4d-201ENSMUST00000054895 Ccdc136Q3TVA9 1136 aa22.54■■□□□ 1.2
Ssc4d-201ENSMUST00000054895 Rsf1E9PWW9 1441 aaKnown RBP22.52■■□□□ 1.2
Ssc4d-201ENSMUST00000054895 Cux2P70298 1426 aa22.52■■□□□ 1.2
Ssc4d-201ENSMUST00000054895 Esf1Q3V1V3 845 aaKnown RBP22.5■■□□□ 1.19
Ssc4d-201ENSMUST00000054895 Kif15Q6P9L6 1387 aa22.44■■□□□ 1.18
Ssc4d-201ENSMUST00000054895 Kif21aQ9QXL2 1672 aa22.39■■□□□ 1.18
Ssc4d-201ENSMUST00000054895 Npm1Q61937 292 aaKnown RBP22.36■■□□□ 1.17
Ssc4d-201ENSMUST00000054895 Shroom2A2ALU4 1481 aa22.28■■□□□ 1.16
Ssc4d-201ENSMUST00000054895 Eif4g3Q80XI3 1579 aaKnown RBP22.23■■□□□ 1.15
Ssc4d-201ENSMUST00000054895 Pabpn1Q8CCS6 302 aaKnown RBP22.18■■□□□ 1.14
Ssc4d-201ENSMUST00000054895 Col17a1Q07563 1470 aa22.16■■□□□ 1.14
Ssc4d-201ENSMUST00000054895 Cep164Q5DU05 1446 aa22.11■■□□□ 1.13
Ssc4d-201ENSMUST00000054895 Il27Q8K3I6 234 aa22.1■■□□□ 1.13
Ssc4d-201ENSMUST00000054895 Lamc3Q9R0B6 1581 aa22.09■■□□□ 1.13
Ssc4d-201ENSMUST00000054895 Urb2E9Q7L1 1524 aaKnown RBP22.09■■□□□ 1.13
Ssc4d-201ENSMUST00000054895 Pelp1Q9DBD5 1123 aaKnown RBP22.08■■□□□ 1.13
Ssc4d-201ENSMUST00000054895 Plb1Q3TTY0 1478 aa22.03■■□□□ 1.12
Ssc4d-201ENSMUST00000054895 Top2bQ64511 1612 aa22■■□□□ 1.11
Ssc4d-201ENSMUST00000054895 Dhx29Q6PGC1 1365 aaKnown RBP21.99■■□□□ 1.11
Ssc4d-201ENSMUST00000054895 Golga3P55937 1487 aa21.86■■□□□ 1.09
Ssc4d-201ENSMUST00000054895 Ccdc18Q640L5 1455 aa21.85■■□□□ 1.09
Ssc4d-201ENSMUST00000054895 LrpprcQ6PB66 1392 aaKnown RBP21.85■■□□□ 1.09
Ssc4d-201ENSMUST00000054895 Crocc2F6XLV1 1638 aa21.8■■□□□ 1.08
Ssc4d-201ENSMUST00000054895 Pcdh10E9PXQ7 1057 aa21.74■■□□□ 1.07
Ssc4d-201ENSMUST00000054895 Ift140E9PY46 1464 aa21.73■■□□□ 1.07
Ssc4d-201ENSMUST00000054895 Rusc2Q80U22 1514 aa21.73■■□□□ 1.07
Ssc4d-201ENSMUST00000054895 TnnQ80Z71 1560 aa21.71■■□□□ 1.07
Ssc4d-201ENSMUST00000054895 Zcchc11B2RX14 1644 aaKnown RBP21.69■■□□□ 1.06
Ssc4d-201ENSMUST00000054895 Cngb1E1AZ71 1325 aa21.68■■□□□ 1.06
Ssc4d-201ENSMUST00000054895 Ttbk1Q6PCN3 1308 aa21.65■■□□□ 1.06
Ssc4d-201ENSMUST00000054895 Camsap1A2AHC3 1581 aa21.65■■□□□ 1.06
Ssc4d-201ENSMUST00000054895 PogzQ8BZH4 1409 aaKnown RBP21.63■■□□□ 1.05
Ssc4d-201ENSMUST00000054895 Fmn1Q05860 1466 aa21.57■■□□□ 1.04
Ssc4d-201ENSMUST00000054895 Duox2A2AQ99 1517 aa21.55■■□□□ 1.04
Ssc4d-201ENSMUST00000054895 Disp1Q3TDN0 1521 aa21.53■■□□□ 1.04
Ssc4d-201ENSMUST00000054895 Adgrl3Q80TS3 1537 aa21.5■■□□□ 1.03
Ssc4d-201ENSMUST00000054895 Arhgef5E9Q7D5 1581 aa21.48■■□□□ 1.03
Ssc4d-201ENSMUST00000054895 Gm156Q58A37 223 aa21.46■■□□□ 1.03
Ssc4d-201ENSMUST00000054895 PtprkP35822 1457 aa21.45■■□□□ 1.02
Ssc4d-201ENSMUST00000054895 Cc2d2bA0A286YDU8 1405 aa21.42■■□□□ 1.02
Ssc4d-201ENSMUST00000054895 Setd1bQ8CFT2 1985 aa21.39■■□□□ 1.02
Ssc4d-201ENSMUST00000054895 Nup160Q9Z0W3 1402 aaKnown RBP21.38■■□□□ 1.01
Ssc4d-201ENSMUST00000054895 Cep170Q6A065 1588 aa21.36■■□□□ 1.01
Ssc4d-201ENSMUST00000054895 Ccdc88bQ4QRL3 1481 aa21.35■■□□□ 1.01
Ssc4d-201ENSMUST00000054895 Gapvd1Q6PAR5 1458 aa21.35■■□□□ 1.01
Ssc4d-201ENSMUST00000054895 Fgd6Q69ZL1 1399 aa21.35■■□□□ 1.01
Ssc4d-201ENSMUST00000054895 Grin2bQ01097 1482 aa21.33■■□□□ 1.01
Ssc4d-201ENSMUST00000054895 PtprtQ99M80 1454 aa21.33■■□□□ 1.01
Ssc4d-201ENSMUST00000054895 Samd9lQ69Z37 1561 aa21.31■■□□□ 1
Ssc4d-201ENSMUST00000054895 Rad54l2Q99NG0 1466 aa21.31■■□□□ 1
Ssc4d-201ENSMUST00000054895 Pbrm1Q8BSQ9 1634 aaKnown RBP21.29■■□□□ 1
Ssc4d-201ENSMUST00000054895 AknaQ80VW7 1404 aa21.26■□□□□ 0.99
Ssc4d-201ENSMUST00000054895 Efcab5A0JP43 1406 aa21.23■□□□□ 0.99
Ssc4d-201ENSMUST00000054895 AqrQ8CFQ3 1481 aaKnown RBP21.23■□□□□ 0.99
Ssc4d-201ENSMUST00000054895 Top2aQ01320 1528 aaKnown RBP21.22■□□□□ 0.99
Ssc4d-201ENSMUST00000054895 HrcG5E8J6 738 aa21.21■□□□□ 0.99
Ssc4d-201ENSMUST00000054895 Chic1Q8CBW7 227 aa21.2■□□□□ 0.98
Ssc4d-201ENSMUST00000054895 Grin2aP35436 1464 aa21.2■□□□□ 0.98
Retrieved 100 of 22,080 RNA–protein pairs in 24.4 ms