RNA–Protein interactions for RNA: ENSMUST00000053414.12

Ccdc171-201, Transcript of Coiled-coil domain-containing protein 171, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Ccdc171, Length 4,525 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc171-201ENSMUST00000053414 NischQ80TM9 1593 aa16.79■□□□□ 0.28
Ccdc171-201ENSMUST00000053414 Gm35339A0A140LHH9 1649 aa16.64■□□□□ 0.25
Ccdc171-201ENSMUST00000053414 Abcc9P70170 1546 aa16.49■□□□□ 0.23
Ccdc171-201ENSMUST00000053414 Rtl1Q7M732 1744 aa16.3■□□□□ 0.2
Ccdc171-201ENSMUST00000053414 Ccdc180J3QNE4 1664 aa16.05■□□□□ 0.16
Ccdc171-201ENSMUST00000053414 Zcchc6Q5BLK4 1491 aaKnown RBP15.96■□□□□ 0.14
Ccdc171-201ENSMUST00000053414 Abcc8B2RUS7 1588 aa15.93■□□□□ 0.14
Ccdc171-201ENSMUST00000053414 Rpgrip1Q9EPQ2 1331 aa15.73■□□□□ 0.11
Ccdc171-201ENSMUST00000053414 Acin1Q9JIX8 1338 aaKnown RBP15.58■□□□□ 0.09
Ccdc171-201ENSMUST00000053414 Dcaf1Q80TR8 1506 aa15.4■□□□□ 0.06
Ccdc171-201ENSMUST00000053414 Rhox8Q6VSS7 320 aa15.38■□□□□ 0.05
Ccdc171-201ENSMUST00000053414 Pcgf6Q99NA9 353 aa15.37■□□□□ 0.05
Ccdc171-201ENSMUST00000053414 Trim41Q5NCC3 630 aa15.23■□□□□ 0.03
Ccdc171-201ENSMUST00000053414 Ehmt2Q9Z148 1263 aaKnown RBP15.11■□□□□ 0.01
Ccdc171-201ENSMUST00000053414 HrcG5E8J6 738 aa14.98□□□□□ -0.01
Ccdc171-201ENSMUST00000053414 Supt5hO55201 1082 aaKnown RBP14.96□□□□□ -0.01
Ccdc171-201ENSMUST00000053414 Neurod1Q60867 357 aa14.91□□□□□ -0.02
Ccdc171-201ENSMUST00000053414 ScribQ80U72 1612 aa14.83□□□□□ -0.04
Ccdc171-201ENSMUST00000053414 Rb1cc1Q9ESK9 1588 aa14.76□□□□□ -0.05
Ccdc171-201ENSMUST00000053414 Baz1aO88379 1555 aa14.6□□□□□ -0.07
Ccdc171-201ENSMUST00000053414 1700123L14RikQ3V2K7 440 aa14.56□□□□□ -0.08
Ccdc171-201ENSMUST00000053414 Cep164Q5DU05 1446 aa14.55□□□□□ -0.08
Ccdc171-201ENSMUST00000053414 Smarca2Q6DIC0 1577 aa14.47□□□□□ -0.09
Ccdc171-201ENSMUST00000053414 Ccdc136Q3TVA9 1136 aa14.43□□□□□ -0.1
Ccdc171-201ENSMUST00000053414 Sall2Q9QX96 1004 aa14.42□□□□□ -0.1
Ccdc171-201ENSMUST00000053414 Kdm5dQ62240 1548 aa14.41□□□□□ -0.1
Ccdc171-201ENSMUST00000053414 Csrnp3P59055 597 aa14.36□□□□□ -0.11
Ccdc171-201ENSMUST00000053414 Rsf1E9PWW9 1441 aaKnown RBP14.35□□□□□ -0.11
Ccdc171-201ENSMUST00000053414 Anks4bQ8K3X6 423 aa14.32□□□□□ -0.12
Ccdc171-201ENSMUST00000053414 Cngb1E1AZ71 1325 aa14.2□□□□□ -0.14
Ccdc171-201ENSMUST00000053414 Ccdc88bQ4QRL3 1481 aa14.2□□□□□ -0.14
Ccdc171-201ENSMUST00000053414 Mier1Q5UAK0 511 aa14.2□□□□□ -0.14
Ccdc171-201ENSMUST00000053414 Chic1Q8CBW7 227 aa14.19□□□□□ -0.14
Ccdc171-201ENSMUST00000053414 Crybg2B7ZCC2 1516 aa14.19□□□□□ -0.14
Ccdc171-201ENSMUST00000053414 Zeb1Q64318 1117 aa14.16□□□□□ -0.14
Ccdc171-201ENSMUST00000053414 Aebp2Q9Z248 504 aaKnown RBP14.16□□□□□ -0.14
Ccdc171-201ENSMUST00000053414 Las1lA2BE28 776 aaKnown RBP14.03□□□□□ -0.16
Ccdc171-201ENSMUST00000053414 Top2bQ64511 1612 aa14.03□□□□□ -0.16
Ccdc171-201ENSMUST00000053414 Aplp2Q06335 707 aa14.03□□□□□ -0.16
Ccdc171-201ENSMUST00000053414 Esf1Q3V1V3 845 aaKnown RBP14.03□□□□□ -0.16
Ccdc171-201ENSMUST00000053414 NefmP08553 848 aa14.02□□□□□ -0.16
Ccdc171-201ENSMUST00000053414 NacadQ5SWP3 1504 aa14□□□□□ -0.17
Ccdc171-201ENSMUST00000053414 Cecr2E9Q2Z1 1453 aa13.95□□□□□ -0.18
Ccdc171-201ENSMUST00000053414 Synj1Q8CHC4 1574 aa13.93□□□□□ -0.18
Ccdc171-201ENSMUST00000053414 Gm38655A0A286YDK6 273 aa13.92□□□□□ -0.18
Ccdc171-201ENSMUST00000053414 Golga3P55937 1487 aa13.88□□□□□ -0.19
Ccdc171-201ENSMUST00000053414 Kdm5bQ80Y84 1544 aa13.88□□□□□ -0.19
Ccdc171-201ENSMUST00000053414 Eif4g1Q6NZJ6 1600 aaKnown RBP13.87□□□□□ -0.19
Ccdc171-201ENSMUST00000053414 CenpbP27790 599 aa13.87□□□□□ -0.19
Ccdc171-201ENSMUST00000053414 Cc2d2aQ8CFW7 1633 aa13.86□□□□□ -0.19
Ccdc171-201ENSMUST00000053414 Rapgef2Q8CHG7 1496 aa13.82□□□□□ -0.2
Ccdc171-201ENSMUST00000053414 Sycp2Q9CUU3 1500 aa13.81□□□□□ -0.2
Ccdc171-201ENSMUST00000053414 ClspnQ80YR7 1315 aa13.79□□□□□ -0.2
Ccdc171-201ENSMUST00000053414 Gab3Q8BSM5 595 aa13.78□□□□□ -0.2
Ccdc171-201ENSMUST00000053414 Myt1Q8CFC2 1127 aa13.78□□□□□ -0.2
Ccdc171-201ENSMUST00000053414 Ncapd3Q6ZQK0 1506 aa13.76□□□□□ -0.21
Ccdc171-201ENSMUST00000053414 Nop58Q6DFW4 536 aaKnown RBP13.75□□□□□ -0.21
Ccdc171-201ENSMUST00000053414 Ppargc1bQ8VHJ7 1014 aa13.75□□□□□ -0.21
Ccdc171-201ENSMUST00000053414 Cdk11bP24788 784 aaKnown RBP13.74□□□□□ -0.21
Ccdc171-201ENSMUST00000053414 Bcl11aQ9QYE3 773 aa13.71□□□□□ -0.22
Ccdc171-201ENSMUST00000053414 BicraF8VPZ9 1578 aa13.71□□□□□ -0.22
Ccdc171-201ENSMUST00000053414 SafbD3YXK2 937 aaKnown RBP13.7□□□□□ -0.22
Ccdc171-201ENSMUST00000053414 Brd4Q9ESU6 1400 aaKnown RBP13.69□□□□□ -0.22
Ccdc171-201ENSMUST00000053414 Top2aQ01320 1528 aaKnown RBP13.68□□□□□ -0.22
Ccdc171-201ENSMUST00000053414 Hnrnpul2Q00PI9 745 aaKnown RBP13.67□□□□□ -0.22
Ccdc171-201ENSMUST00000053414 Fam71e1A1L3C1 212 aa13.67□□□□□ -0.22
Ccdc171-201ENSMUST00000053414 CftrP26361 1476 aa13.66□□□□□ -0.22
Ccdc171-201ENSMUST00000053414 Ifnlr1Q8CGK5 535 aa13.62□□□□□ -0.23
Ccdc171-201ENSMUST00000053414 Cttnbp2B9EJA2 1648 aa13.59□□□□□ -0.23
Ccdc171-201ENSMUST00000053414 Mapk8ip2Q9ERE9 830 aa13.58□□□□□ -0.23
Ccdc171-201ENSMUST00000053414 Rpap1Q80TE0 1409 aa13.58□□□□□ -0.24
Ccdc171-201ENSMUST00000053414 Cep162Q6ZQ06 1403 aa13.56□□□□□ -0.24
Ccdc171-201ENSMUST00000053414 DiexfQ8BTT6 772 aaKnown RBP13.56□□□□□ -0.24
Ccdc171-201ENSMUST00000053414 Wdr66E9Q743 1299 aa13.54□□□□□ -0.24
Ccdc171-201ENSMUST00000053414 Znf710Q3U288 666 aa13.52□□□□□ -0.25
Ccdc171-201ENSMUST00000053414 UbtfP25976 765 aaKnown RBP13.51□□□□□ -0.25
Ccdc171-201ENSMUST00000053414 TchhA0A0B4J1F9 1599 aa13.5□□□□□ -0.25
Ccdc171-201ENSMUST00000053414 PrkcshO08795 521 aa13.49□□□□□ -0.25
Ccdc171-201ENSMUST00000053414 TonslQ6NZL6 1363 aa13.46□□□□□ -0.25
Ccdc171-201ENSMUST00000053414 Smarca4Q3TKT4 1613 aaKnown RBP13.41□□□□□ -0.26
Ccdc171-201ENSMUST00000053414 Arap1Q4LDD4 1452 aa13.41□□□□□ -0.26
Ccdc171-201ENSMUST00000053414 Fmn1Q05860 1466 aa13.4□□□□□ -0.26
Ccdc171-201ENSMUST00000053414 Ap3b1Q9Z1T1 1105 aa13.39□□□□□ -0.27
Ccdc171-201ENSMUST00000053414 TnnQ80Z71 1560 aa13.36□□□□□ -0.27
Ccdc171-201ENSMUST00000053414 Il27Q8K3I6 234 aa13.34□□□□□ -0.27
Ccdc171-201ENSMUST00000053414 Nolc1E9Q5C9 702 aaKnown RBP13.34□□□□□ -0.27
Ccdc171-201ENSMUST00000053414 Npm2Q80W85 207 aa13.34□□□□□ -0.27
Ccdc171-201ENSMUST00000053414 Arhgef5E9Q7D5 1581 aa13.32□□□□□ -0.28
Ccdc171-201ENSMUST00000053414 Arhgap35Q91YM2 1499 aa13.32□□□□□ -0.28
Ccdc171-201ENSMUST00000053414 PtprkP35822 1457 aa13.27□□□□□ -0.28
Ccdc171-201ENSMUST00000053414 Erich3F6QRE9 1637 aa13.25□□□□□ -0.29
Ccdc171-201ENSMUST00000053414 AqrQ8CFQ3 1481 aaKnown RBP13.25□□□□□ -0.29
Ccdc171-201ENSMUST00000053414 Plekhg3Q4VAC9 1341 aa13.24□□□□□ -0.29
Ccdc171-201ENSMUST00000053414 Tiam1Q60610 1591 aa13.22□□□□□ -0.29
Ccdc171-201ENSMUST00000053414 NrkQ9R0G8 1455 aa13.22□□□□□ -0.29
Ccdc171-201ENSMUST00000053414 Npm1Q61937 292 aaKnown RBP13.21□□□□□ -0.3
Ccdc171-201ENSMUST00000053414 Clip1Q922J3 1391 aa13.2□□□□□ -0.3
Ccdc171-201ENSMUST00000053414 Slx4Q6P1D7 1565 aa13.2□□□□□ -0.3
Ccdc171-201ENSMUST00000053414 Eid3Q3V124 375 aa13.19□□□□□ -0.3
Ccdc171-201ENSMUST00000053414 UacaQ8CGB3 1411 aa13.18□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 21.7 ms