RNA–Protein interactions for RNA: ENSMUST00000045923.9

Limd2-201, Transcript of LIM domain-containing protein 2, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Limd2, Length 2,950 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Limd2-201ENSMUST00000045923 NischQ80TM9 1593 aa24.04■■□□□ 1.44
Limd2-201ENSMUST00000045923 Gm35339A0A140LHH9 1649 aa23.56■■□□□ 1.36
Limd2-201ENSMUST00000045923 Abcc9P70170 1546 aa23.32■■□□□ 1.32
Limd2-201ENSMUST00000045923 Abcc8B2RUS7 1588 aa22.8■■□□□ 1.24
Limd2-201ENSMUST00000045923 Rhox8Q6VSS7 320 aa22.38■■□□□ 1.17
Limd2-201ENSMUST00000045923 Rtl1Q7M732 1744 aa21.88■■□□□ 1.09
Limd2-201ENSMUST00000045923 Ccdc180J3QNE4 1664 aa21.52■■□□□ 1.04
Limd2-201ENSMUST00000045923 ScribQ80U72 1612 aa21.36■■□□□ 1.01
Limd2-201ENSMUST00000045923 Zcchc6Q5BLK4 1491 aaKnown RBP21.26■□□□□ 0.99
Limd2-201ENSMUST00000045923 Dcaf1Q80TR8 1506 aa21.1■□□□□ 0.97
Limd2-201ENSMUST00000045923 Rb1cc1Q9ESK9 1588 aa21.09■□□□□ 0.97
Limd2-201ENSMUST00000045923 Kdm5dQ62240 1548 aa20.91■□□□□ 0.94
Limd2-201ENSMUST00000045923 Ccdc136Q3TVA9 1136 aa20.82■□□□□ 0.92
Limd2-201ENSMUST00000045923 Baz1aO88379 1555 aa20.77■□□□□ 0.92
Limd2-201ENSMUST00000045923 NacadQ5SWP3 1504 aa20.61■□□□□ 0.89
Limd2-201ENSMUST00000045923 HrcG5E8J6 738 aa20.44■□□□□ 0.86
Limd2-201ENSMUST00000045923 Ehmt2Q9Z148 1263 aaKnown RBP20.42■□□□□ 0.86
Limd2-201ENSMUST00000045923 Smarca2Q6DIC0 1577 aa20.34■□□□□ 0.85
Limd2-201ENSMUST00000045923 Trim41Q5NCC3 630 aa20.24■□□□□ 0.83
Limd2-201ENSMUST00000045923 Crybg2B7ZCC2 1516 aa20.23■□□□□ 0.83
Limd2-201ENSMUST00000045923 Sycp2Q9CUU3 1500 aa20.21■□□□□ 0.83
Limd2-201ENSMUST00000045923 Rpgrip1Q9EPQ2 1331 aa20.16■□□□□ 0.82
Limd2-201ENSMUST00000045923 Acin1Q9JIX8 1338 aaKnown RBP20.13■□□□□ 0.81
Limd2-201ENSMUST00000045923 Cecr2E9Q2Z1 1453 aa19.95■□□□□ 0.78
Limd2-201ENSMUST00000045923 Cep164Q5DU05 1446 aa19.92■□□□□ 0.78
Limd2-201ENSMUST00000045923 BicraF8VPZ9 1578 aa19.87■□□□□ 0.77
Limd2-201ENSMUST00000045923 Cngb1E1AZ71 1325 aa19.86■□□□□ 0.77
Limd2-201ENSMUST00000045923 DiexfQ8BTT6 772 aaKnown RBP19.86■□□□□ 0.77
Limd2-201ENSMUST00000045923 Chic1Q8CBW7 227 aa19.83■□□□□ 0.77
Limd2-201ENSMUST00000045923 Rsf1E9PWW9 1441 aaKnown RBP19.81■□□□□ 0.76
Limd2-201ENSMUST00000045923 Synj1Q8CHC4 1574 aa19.77■□□□□ 0.76
Limd2-201ENSMUST00000045923 Pcgf6Q99NA9 353 aa19.76■□□□□ 0.75
Limd2-201ENSMUST00000045923 Brd4Q9ESU6 1400 aaKnown RBP19.76■□□□□ 0.75
Limd2-201ENSMUST00000045923 Gab3Q8BSM5 595 aa19.71■□□□□ 0.75
Limd2-201ENSMUST00000045923 Ccdc88bQ4QRL3 1481 aa19.7■□□□□ 0.74
Limd2-201ENSMUST00000045923 Myt1Q8CFC2 1127 aa19.67■□□□□ 0.74
Limd2-201ENSMUST00000045923 Golga3P55937 1487 aa19.63■□□□□ 0.73
Limd2-201ENSMUST00000045923 CftrP26361 1476 aa19.56■□□□□ 0.72
Limd2-201ENSMUST00000045923 Esf1Q3V1V3 845 aaKnown RBP19.5■□□□□ 0.71
Limd2-201ENSMUST00000045923 Top2bQ64511 1612 aa19.46■□□□□ 0.71
Limd2-201ENSMUST00000045923 Cttnbp2B9EJA2 1648 aa19.44■□□□□ 0.7
Limd2-201ENSMUST00000045923 Cc2d2aQ8CFW7 1633 aa19.41■□□□□ 0.7
Limd2-201ENSMUST00000045923 Smarca4Q3TKT4 1613 aaKnown RBP19.36■□□□□ 0.69
Limd2-201ENSMUST00000045923 CenpbP27790 599 aa19.33■□□□□ 0.69
Limd2-201ENSMUST00000045923 Bcl11aQ9QYE3 773 aa19.21■□□□□ 0.67
Limd2-201ENSMUST00000045923 Supt5hO55201 1082 aaKnown RBP19.16■□□□□ 0.66
Limd2-201ENSMUST00000045923 Amer1Q7TS75 1132 aa19.15■□□□□ 0.66
Limd2-201ENSMUST00000045923 Mier1Q5UAK0 511 aa19.13■□□□□ 0.65
Limd2-201ENSMUST00000045923 Iqgap2Q3UQ44 1575 aa19.13■□□□□ 0.65
Limd2-201ENSMUST00000045923 Las1lA2BE28 776 aaKnown RBP19.07■□□□□ 0.64
Limd2-201ENSMUST00000045923 Fmn1Q05860 1466 aa19.07■□□□□ 0.64
Limd2-201ENSMUST00000045923 Top2aQ01320 1528 aaKnown RBP19.06■□□□□ 0.64
Limd2-201ENSMUST00000045923 Rapgef2Q8CHG7 1496 aa19.06■□□□□ 0.64
Limd2-201ENSMUST00000045923 Zeb1Q64318 1117 aa19.01■□□□□ 0.63
Limd2-201ENSMUST00000045923 Myt1lP97500 1187 aa18.95■□□□□ 0.62
Limd2-201ENSMUST00000045923 UbtfP25976 765 aaKnown RBP18.92■□□□□ 0.62
Limd2-201ENSMUST00000045923 Cep162Q6ZQ06 1403 aa18.92■□□□□ 0.62
Limd2-201ENSMUST00000045923 Atad2bE9Q166 1460 aaKnown RBP18.91■□□□□ 0.62
Limd2-201ENSMUST00000045923 NefmP08553 848 aa18.86■□□□□ 0.61
Limd2-201ENSMUST00000045923 Npm2Q80W85 207 aa18.81■□□□□ 0.6
Limd2-201ENSMUST00000045923 TnnQ80Z71 1560 aa18.79■□□□□ 0.6
Limd2-201ENSMUST00000045923 Eif4g1Q6NZJ6 1600 aaKnown RBP18.78■□□□□ 0.6
Limd2-201ENSMUST00000045923 Pds5bQ4VA53 1446 aaKnown RBP18.77■□□□□ 0.6
Limd2-201ENSMUST00000045923 PrkcshO08795 521 aa18.75■□□□□ 0.59
Limd2-201ENSMUST00000045923 Frmpd1A2AKB4 1549 aa18.75■□□□□ 0.59
Limd2-201ENSMUST00000045923 Wdr62Q3U3T8 1523 aa18.71■□□□□ 0.59
Limd2-201ENSMUST00000045923 Sall2Q9QX96 1004 aa18.7■□□□□ 0.58
Limd2-201ENSMUST00000045923 Unc13aQ4KUS2 1712 aa18.7■□□□□ 0.58
Limd2-201ENSMUST00000045923 PtprkP35822 1457 aa18.69■□□□□ 0.58
Limd2-201ENSMUST00000045923 Plekhg3Q4VAC9 1341 aa18.69■□□□□ 0.58
Limd2-201ENSMUST00000045923 Il27Q8K3I6 234 aa18.65■□□□□ 0.58
Limd2-201ENSMUST00000045923 Clip1Q922J3 1391 aa18.65■□□□□ 0.58
Limd2-201ENSMUST00000045923 1700123L14RikQ3V2K7 440 aa18.63■□□□□ 0.57
Limd2-201ENSMUST00000045923 Arhgap35Q91YM2 1499 aa18.62■□□□□ 0.57
Limd2-201ENSMUST00000045923 Lamc3Q9R0B6 1581 aa18.6■□□□□ 0.57
Limd2-201ENSMUST00000045923 Neurod1Q60867 357 aa18.59■□□□□ 0.57
Limd2-201ENSMUST00000045923 Kif15Q6P9L6 1387 aa18.57■□□□□ 0.56
Limd2-201ENSMUST00000045923 Aebp2Q9Z248 504 aaKnown RBP18.56■□□□□ 0.56
Limd2-201ENSMUST00000045923 CatipB9EKE5 520 aa18.54■□□□□ 0.56
Limd2-201ENSMUST00000045923 NrkQ9R0G8 1455 aa18.52■□□□□ 0.56
Limd2-201ENSMUST00000045923 Ap3b1Q9Z1T1 1105 aa18.51■□□□□ 0.55
Limd2-201ENSMUST00000045923 Camsap1A2AHC3 1581 aa18.51■□□□□ 0.55
Limd2-201ENSMUST00000045923 Arap1Q4LDD4 1452 aa18.49■□□□□ 0.55
Limd2-201ENSMUST00000045923 Ercc6F8VPZ5 1481 aa18.49■□□□□ 0.55
Limd2-201ENSMUST00000045923 Ppargc1bQ8VHJ7 1014 aa18.47■□□□□ 0.55
Limd2-201ENSMUST00000045923 Ncapd3Q6ZQK0 1506 aa18.46■□□□□ 0.55
Limd2-201ENSMUST00000045923 Wdr66E9Q743 1299 aa18.46■□□□□ 0.55
Limd2-201ENSMUST00000045923 Shroom4Q1W617 1475 aa18.45■□□□□ 0.54
Limd2-201ENSMUST00000045923 Eea1Q8BL66 1411 aa18.39■□□□□ 0.53
Limd2-201ENSMUST00000045923 Grin2bQ01097 1482 aa18.37■□□□□ 0.53
Limd2-201ENSMUST00000045923 Arhgef5E9Q7D5 1581 aa18.37■□□□□ 0.53
Limd2-201ENSMUST00000045923 Setd5Q5XJV7 1441 aa18.36■□□□□ 0.53
Limd2-201ENSMUST00000045923 TonslQ6NZL6 1363 aa18.33■□□□□ 0.52
Limd2-201ENSMUST00000045923 Plppr3Q7TPB0 716 aa18.32■□□□□ 0.52
Limd2-201ENSMUST00000045923 Ccdc18Q640L5 1455 aa18.31■□□□□ 0.52
Limd2-201ENSMUST00000045923 Map3k1P53349 1493 aa18.3■□□□□ 0.52
Limd2-201ENSMUST00000045923 Baz1bQ9Z277 1479 aa18.3■□□□□ 0.52
Limd2-201ENSMUST00000045923 Mroh2bQ7M6Y6 1581 aa18.29■□□□□ 0.52
Limd2-201ENSMUST00000045923 AqrQ8CFQ3 1481 aaKnown RBP18.29■□□□□ 0.52
Limd2-201ENSMUST00000045923 Ankrd26Q811D2 1581 aa18.27■□□□□ 0.52
Retrieved 100 of 22,080 RNA–protein pairs in 13.4 ms