RNA–Protein interactions for RNA: ENSMUST00000040188.14

Ska1-201, Transcript of Spindle and kinetochore-associated protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ska1, Length 2,669 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1-201ENSMUST00000040188 NischQ80TM9 1593 aa26.84■■□□□ 1.89
Ska1-201ENSMUST00000040188 Gm35339A0A140LHH9 1649 aa26.14■■□□□ 1.77
Ska1-201ENSMUST00000040188 Abcc9P70170 1546 aa25.97■■□□□ 1.75
Ska1-201ENSMUST00000040188 Abcc8B2RUS7 1588 aa25.45■■□□□ 1.66
Ska1-201ENSMUST00000040188 Rhox8Q6VSS7 320 aa25.22■■□□□ 1.63
Ska1-201ENSMUST00000040188 Rtl1Q7M732 1744 aa24.28■■□□□ 1.48
Ska1-201ENSMUST00000040188 Ccdc180J3QNE4 1664 aa23.96■■□□□ 1.43
Ska1-201ENSMUST00000040188 ScribQ80U72 1612 aa23.73■■□□□ 1.39
Ska1-201ENSMUST00000040188 Zcchc6Q5BLK4 1491 aaKnown RBP23.62■■□□□ 1.37
Ska1-201ENSMUST00000040188 Dcaf1Q80TR8 1506 aa23.56■■□□□ 1.36
Ska1-201ENSMUST00000040188 Rb1cc1Q9ESK9 1588 aa23.51■■□□□ 1.35
Ska1-201ENSMUST00000040188 Ccdc136Q3TVA9 1136 aa23.44■■□□□ 1.34
Ska1-201ENSMUST00000040188 Kdm5dQ62240 1548 aa23.32■■□□□ 1.32
Ska1-201ENSMUST00000040188 Baz1aO88379 1555 aa23.18■■□□□ 1.3
Ska1-201ENSMUST00000040188 NacadQ5SWP3 1504 aa23.08■■□□□ 1.28
Ska1-201ENSMUST00000040188 HrcG5E8J6 738 aa22.98■■□□□ 1.27
Ska1-201ENSMUST00000040188 Ehmt2Q9Z148 1263 aaKnown RBP22.87■■□□□ 1.25
Ska1-201ENSMUST00000040188 Trim41Q5NCC3 630 aa22.76■■□□□ 1.23
Ska1-201ENSMUST00000040188 Smarca2Q6DIC0 1577 aa22.65■■□□□ 1.22
Ska1-201ENSMUST00000040188 Rpgrip1Q9EPQ2 1331 aa22.64■■□□□ 1.21
Ska1-201ENSMUST00000040188 Crybg2B7ZCC2 1516 aa22.63■■□□□ 1.21
Ska1-201ENSMUST00000040188 Sycp2Q9CUU3 1500 aa22.59■■□□□ 1.21
Ska1-201ENSMUST00000040188 Acin1Q9JIX8 1338 aaKnown RBP22.52■■□□□ 1.2
Ska1-201ENSMUST00000040188 Cngb1E1AZ71 1325 aa22.37■■□□□ 1.17
Ska1-201ENSMUST00000040188 Cecr2E9Q2Z1 1453 aa22.29■■□□□ 1.16
Ska1-201ENSMUST00000040188 Cep164Q5DU05 1446 aa22.28■■□□□ 1.16
Ska1-201ENSMUST00000040188 Chic1Q8CBW7 227 aa22.24■■□□□ 1.15
Ska1-201ENSMUST00000040188 Gab3Q8BSM5 595 aa22.18■■□□□ 1.14
Ska1-201ENSMUST00000040188 Brd4Q9ESU6 1400 aaKnown RBP22.18■■□□□ 1.14
Ska1-201ENSMUST00000040188 Rsf1E9PWW9 1441 aaKnown RBP22.13■■□□□ 1.13
Ska1-201ENSMUST00000040188 BicraF8VPZ9 1578 aa22.12■■□□□ 1.13
Ska1-201ENSMUST00000040188 Synj1Q8CHC4 1574 aa22.04■■□□□ 1.12
Ska1-201ENSMUST00000040188 Esf1Q3V1V3 845 aaKnown RBP22.02■■□□□ 1.12
Ska1-201ENSMUST00000040188 Ccdc88bQ4QRL3 1481 aa22.01■■□□□ 1.11
Ska1-201ENSMUST00000040188 Golga3P55937 1487 aa21.97■■□□□ 1.11
Ska1-201ENSMUST00000040188 CftrP26361 1476 aa21.88■■□□□ 1.09
Ska1-201ENSMUST00000040188 Pcgf6Q99NA9 353 aa21.65■■□□□ 1.06
Ska1-201ENSMUST00000040188 Cttnbp2B9EJA2 1648 aa21.65■■□□□ 1.06
Ska1-201ENSMUST00000040188 Top2bQ64511 1612 aa21.62■■□□□ 1.05
Ska1-201ENSMUST00000040188 Smarca4Q3TKT4 1613 aaKnown RBP21.61■■□□□ 1.05
Ska1-201ENSMUST00000040188 Cc2d2aQ8CFW7 1633 aa21.53■■□□□ 1.04
Ska1-201ENSMUST00000040188 Mier1Q5UAK0 511 aa21.45■■□□□ 1.02
Ska1-201ENSMUST00000040188 Supt5hO55201 1082 aaKnown RBP21.42■■□□□ 1.02
Ska1-201ENSMUST00000040188 Myt1lP97500 1187 aa21.36■■□□□ 1.01
Ska1-201ENSMUST00000040188 Iqgap2Q3UQ44 1575 aa21.36■■□□□ 1.01
Ska1-201ENSMUST00000040188 Fmn1Q05860 1466 aa21.34■■□□□ 1.01
Ska1-201ENSMUST00000040188 Zeb1Q64318 1117 aa21.33■■□□□ 1.01
Ska1-201ENSMUST00000040188 Rapgef2Q8CHG7 1496 aa21.29■■□□□ 1
Ska1-201ENSMUST00000040188 UbtfP25976 765 aaKnown RBP21.29■■□□□ 1
Ska1-201ENSMUST00000040188 Top2aQ01320 1528 aaKnown RBP21.25■□□□□ 0.99
Ska1-201ENSMUST00000040188 Npm2Q80W85 207 aa21.24■□□□□ 0.99
Ska1-201ENSMUST00000040188 NefmP08553 848 aa21.22■□□□□ 0.99
Ska1-201ENSMUST00000040188 Atad2bE9Q166 1460 aaKnown RBP21.22■□□□□ 0.99
Ska1-201ENSMUST00000040188 Cep162Q6ZQ06 1403 aa21.18■□□□□ 0.98
Ska1-201ENSMUST00000040188 Pds5bQ4VA53 1446 aaKnown RBP21.1■□□□□ 0.97
Ska1-201ENSMUST00000040188 Il27Q8K3I6 234 aa21.05■□□□□ 0.96
Ska1-201ENSMUST00000040188 Plekhg3Q4VAC9 1341 aa20.98■□□□□ 0.95
Ska1-201ENSMUST00000040188 Frmpd1A2AKB4 1549 aa20.97■□□□□ 0.95
Ska1-201ENSMUST00000040188 Clip1Q922J3 1391 aa20.95■□□□□ 0.94
Ska1-201ENSMUST00000040188 Sall2Q9QX96 1004 aa20.92■□□□□ 0.94
Ska1-201ENSMUST00000040188 TnnQ80Z71 1560 aa20.9■□□□□ 0.94
Ska1-201ENSMUST00000040188 Wdr62Q3U3T8 1523 aa20.88■□□□□ 0.93
Ska1-201ENSMUST00000040188 PtprkP35822 1457 aa20.88■□□□□ 0.93
Ska1-201ENSMUST00000040188 Kif15Q6P9L6 1387 aa20.87■□□□□ 0.93
Ska1-201ENSMUST00000040188 Ap3b1Q9Z1T1 1105 aa20.83■□□□□ 0.93
Ska1-201ENSMUST00000040188 Eif4g1Q6NZJ6 1600 aaKnown RBP20.83■□□□□ 0.93
Ska1-201ENSMUST00000040188 Arhgap35Q91YM2 1499 aa20.8■□□□□ 0.92
Ska1-201ENSMUST00000040188 Wdr66E9Q743 1299 aa20.76■□□□□ 0.91
Ska1-201ENSMUST00000040188 Aebp2Q9Z248 504 aaKnown RBP20.76■□□□□ 0.91
Ska1-201ENSMUST00000040188 Ercc6F8VPZ5 1481 aa20.76■□□□□ 0.91
Ska1-201ENSMUST00000040188 Lamc3Q9R0B6 1581 aa20.76■□□□□ 0.91
Ska1-201ENSMUST00000040188 Las1lA2BE28 776 aaKnown RBP20.75■□□□□ 0.91
Ska1-201ENSMUST00000040188 Neurod1Q60867 357 aa20.75■□□□□ 0.91
Ska1-201ENSMUST00000040188 NrkQ9R0G8 1455 aa20.69■□□□□ 0.9
Ska1-201ENSMUST00000040188 Ppargc1bQ8VHJ7 1014 aa20.69■□□□□ 0.9
Ska1-201ENSMUST00000040188 Unc13aQ4KUS2 1712 aa20.67■□□□□ 0.9
Ska1-201ENSMUST00000040188 Camsap1A2AHC3 1581 aa20.64■□□□□ 0.9
Ska1-201ENSMUST00000040188 Eea1Q8BL66 1411 aa20.64■□□□□ 0.89
Ska1-201ENSMUST00000040188 Shroom4Q1W617 1475 aa20.64■□□□□ 0.89
Ska1-201ENSMUST00000040188 Arap1Q4LDD4 1452 aa20.63■□□□□ 0.89
Ska1-201ENSMUST00000040188 Setd5Q5XJV7 1441 aa20.63■□□□□ 0.89
Ska1-201ENSMUST00000040188 TonslQ6NZL6 1363 aa20.59■□□□□ 0.89
Ska1-201ENSMUST00000040188 Ncapd3Q6ZQK0 1506 aa20.59■□□□□ 0.89
Ska1-201ENSMUST00000040188 Ccdc18Q640L5 1455 aa20.57■□□□□ 0.88
Ska1-201ENSMUST00000040188 Grin2bQ01097 1482 aa20.54■□□□□ 0.88
Ska1-201ENSMUST00000040188 Ubl4bQ9CQ84 188 aa20.54■□□□□ 0.88
Ska1-201ENSMUST00000040188 Baz1bQ9Z277 1479 aa20.49■□□□□ 0.87
Ska1-201ENSMUST00000040188 Npm1Q61937 292 aaKnown RBP20.49■□□□□ 0.87
Ska1-201ENSMUST00000040188 Arhgef5E9Q7D5 1581 aa20.49■□□□□ 0.87
Ska1-201ENSMUST00000040188 Cux2P70298 1426 aa20.48■□□□□ 0.87
Ska1-201ENSMUST00000040188 Eid3Q3V124 375 aa20.48■□□□□ 0.87
Ska1-201ENSMUST00000040188 Phldb1Q6PDH0 1371 aaKnown RBP20.47■□□□□ 0.87
Ska1-201ENSMUST00000040188 Map3k1P53349 1493 aa20.46■□□□□ 0.87
Ska1-201ENSMUST00000040188 ClspnQ80YR7 1315 aa20.46■□□□□ 0.87
Ska1-201ENSMUST00000040188 Mroh2bQ7M6Y6 1581 aa20.45■□□□□ 0.86
Ska1-201ENSMUST00000040188 BlmO88700 1416 aa20.41■□□□□ 0.86
Ska1-201ENSMUST00000040188 Lmod2Q3UHZ5 550 aa20.41■□□□□ 0.86
Ska1-201ENSMUST00000040188 AqrQ8CFQ3 1481 aaKnown RBP20.4■□□□□ 0.86
Ska1-201ENSMUST00000040188 Naip1Q9QWK5 1403 aa20.36■□□□□ 0.85
Ska1-201ENSMUST00000040188 Tiam1Q60610 1591 aa20.34■□□□□ 0.85
Retrieved 100 of 22,080 RNA–protein pairs in 23.4 ms