RNA–Protein interactions for RNA: ENSMUST00000036992.8

Lmo1-201, Transcript of Rhombotin-1, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Lmo1, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo1-201ENSMUST00000036992 Gm35339A0A140LHH9 1649 aa43.66■■■■■ 4.58
Lmo1-201ENSMUST00000036992 NischQ80TM9 1593 aa43.07■■■■■ 4.49
Lmo1-201ENSMUST00000036992 Abcc9P70170 1546 aa41.71■■■■■ 4.27
Lmo1-201ENSMUST00000036992 Abcc8B2RUS7 1588 aa41.63■■■■■ 4.25
Lmo1-201ENSMUST00000036992 ScribQ80U72 1612 aa40.18■■■■■ 4.02
Lmo1-201ENSMUST00000036992 Kdm5dQ62240 1548 aa38.84■■■■□ 3.81
Lmo1-201ENSMUST00000036992 NacadQ5SWP3 1504 aa38.83■■■■□ 3.81
Lmo1-201ENSMUST00000036992 Dcaf1Q80TR8 1506 aa38.27■■■■□ 3.72
Lmo1-201ENSMUST00000036992 Sycp2Q9CUU3 1500 aa38.08■■■■□ 3.69
Lmo1-201ENSMUST00000036992 BicraF8VPZ9 1578 aa37.6■■■■□ 3.61
Lmo1-201ENSMUST00000036992 Rb1cc1Q9ESK9 1588 aa37.59■■■■□ 3.61
Lmo1-201ENSMUST00000036992 Rhox8Q6VSS7 320 aa37.24■■■■□ 3.55
Lmo1-201ENSMUST00000036992 Baz1aO88379 1555 aa37.02■■■■□ 3.52
Lmo1-201ENSMUST00000036992 Ccdc180J3QNE4 1664 aa36.99■■■■□ 3.51
Lmo1-201ENSMUST00000036992 Crybg2B7ZCC2 1516 aa36.77■■■■□ 3.48
Lmo1-201ENSMUST00000036992 Zcchc6Q5BLK4 1491 aaKnown RBP36.49■■■■□ 3.43
Lmo1-201ENSMUST00000036992 Dnajc5bQ9CQ94 199 aa36.45■■■■□ 3.43
Lmo1-201ENSMUST00000036992 Pds5bQ4VA53 1446 aaKnown RBP36.43■■■■□ 3.42
Lmo1-201ENSMUST00000036992 Thoc2B1AZI6 1594 aaKnown RBP36.2■■■■□ 3.39
Lmo1-201ENSMUST00000036992 Atad2bE9Q166 1460 aaKnown RBP36.12■■■■□ 3.37
Lmo1-201ENSMUST00000036992 Smarca2Q6DIC0 1577 aa35.96■■■■□ 3.35
Lmo1-201ENSMUST00000036992 Smarca4Q3TKT4 1613 aaKnown RBP35.9■■■■□ 3.34
Lmo1-201ENSMUST00000036992 Cecr2E9Q2Z1 1453 aa35.84■■■■□ 3.33
Lmo1-201ENSMUST00000036992 Ercc6F8VPZ5 1481 aa35.72■■■■□ 3.31
Lmo1-201ENSMUST00000036992 Iqgap2Q3UQ44 1575 aa35.71■■■■□ 3.31
Lmo1-201ENSMUST00000036992 Cc2d2aQ8CFW7 1633 aa35.62■■■■□ 3.29
Lmo1-201ENSMUST00000036992 Rtl1Q7M732 1744 aa35.48■■■■□ 3.27
Lmo1-201ENSMUST00000036992 Wdr62Q3U3T8 1523 aa35.38■■■■□ 3.25
Lmo1-201ENSMUST00000036992 Fam135aQ6NS59 1506 aa35.37■■■■□ 3.25
Lmo1-201ENSMUST00000036992 Frmpd1A2AKB4 1549 aa35.32■■■■□ 3.25
Lmo1-201ENSMUST00000036992 Phldb1Q6PDH0 1371 aaKnown RBP35.05■■■■□ 3.2
Lmo1-201ENSMUST00000036992 CftrP26361 1476 aa35■■■■□ 3.19
Lmo1-201ENSMUST00000036992 Cttnbp2B9EJA2 1648 aa34.99■■■■□ 3.19
Lmo1-201ENSMUST00000036992 Synj1Q8CHC4 1574 aa34.99■■■■□ 3.19
Lmo1-201ENSMUST00000036992 Unc13aQ4KUS2 1712 aa34.95■■■■□ 3.19
Lmo1-201ENSMUST00000036992 Brd4Q9ESU6 1400 aaKnown RBP34.88■■■■□ 3.17
Lmo1-201ENSMUST00000036992 Ccdc136Q3TVA9 1136 aa34.85■■■■□ 3.17
Lmo1-201ENSMUST00000036992 Baz1bQ9Z277 1479 aa34.83■■■■□ 3.17
Lmo1-201ENSMUST00000036992 Ubl4bQ9CQ84 188 aa34.72■■■■□ 3.15
Lmo1-201ENSMUST00000036992 Mrc2Q64449 1479 aa34.52■■■■□ 3.12
Lmo1-201ENSMUST00000036992 Esf1Q3V1V3 845 aaKnown RBP34.33■■■■□ 3.09
Lmo1-201ENSMUST00000036992 Trim41Q5NCC3 630 aa34.24■■■■□ 3.07
Lmo1-201ENSMUST00000036992 Rsf1E9PWW9 1441 aaKnown RBP34.12■■■■□ 3.05
Lmo1-201ENSMUST00000036992 Kif15Q6P9L6 1387 aa34.07■■■■□ 3.04
Lmo1-201ENSMUST00000036992 Cux2P70298 1426 aa34.03■■■■□ 3.04
Lmo1-201ENSMUST00000036992 Lamc3Q9R0B6 1581 aa33.98■■■■□ 3.03
Lmo1-201ENSMUST00000036992 Kif21aQ9QXL2 1672 aa33.84■■■■□ 3.01
Lmo1-201ENSMUST00000036992 Lrriq1Q0P5X1 1673 aa33.84■■■■□ 3.01
Lmo1-201ENSMUST00000036992 Top2bQ64511 1612 aa33.71■■■□□ 2.99
Lmo1-201ENSMUST00000036992 Golga3P55937 1487 aa33.71■■■□□ 2.99
Lmo1-201ENSMUST00000036992 TnnQ80Z71 1560 aa33.64■■■□□ 2.98
Lmo1-201ENSMUST00000036992 Npm1Q61937 292 aaKnown RBP33.61■■■□□ 2.97
Lmo1-201ENSMUST00000036992 Cngb1E1AZ71 1325 aa33.57■■■□□ 2.97
Lmo1-201ENSMUST00000036992 Cep164Q5DU05 1446 aa33.54■■■□□ 2.96
Lmo1-201ENSMUST00000036992 Ccdc18Q640L5 1455 aa33.42■■■□□ 2.94
Lmo1-201ENSMUST00000036992 Camsap1A2AHC3 1581 aa33.4■■■□□ 2.94
Lmo1-201ENSMUST00000036992 Il27Q8K3I6 234 aa33.38■■■□□ 2.93
Lmo1-201ENSMUST00000036992 Eif4g3Q80XI3 1579 aaKnown RBP33.33■■■□□ 2.93
Lmo1-201ENSMUST00000036992 Dhx29Q6PGC1 1365 aaKnown RBP33.32■■■□□ 2.92
Lmo1-201ENSMUST00000036992 Fmn1Q05860 1466 aa33.31■■■□□ 2.92
Lmo1-201ENSMUST00000036992 Urb2E9Q7L1 1524 aaKnown RBP33.28■■■□□ 2.92
Lmo1-201ENSMUST00000036992 LrpprcQ6PB66 1392 aaKnown RBP33.24■■■□□ 2.91
Lmo1-201ENSMUST00000036992 Plb1Q3TTY0 1478 aa33.21■■■□□ 2.91
Lmo1-201ENSMUST00000036992 Crocc2F6XLV1 1638 aa33.2■■■□□ 2.91
Lmo1-201ENSMUST00000036992 PogzQ8BZH4 1409 aaKnown RBP33.08■■■□□ 2.89
Lmo1-201ENSMUST00000036992 Duox2A2AQ99 1517 aa32.92■■■□□ 2.86
Lmo1-201ENSMUST00000036992 Grin2bQ01097 1482 aa32.92■■■□□ 2.86
Lmo1-201ENSMUST00000036992 Ift140E9PY46 1464 aa32.88■■■□□ 2.85
Lmo1-201ENSMUST00000036992 Ccdc88bQ4QRL3 1481 aa32.86■■■□□ 2.85
Lmo1-201ENSMUST00000036992 Dnajc5P60904 198 aa32.85■■■□□ 2.85
Lmo1-201ENSMUST00000036992 Rusc2Q80U22 1514 aa32.82■■■□□ 2.84
Lmo1-201ENSMUST00000036992 Shroom2A2ALU4 1481 aa32.81■■■□□ 2.84
Lmo1-201ENSMUST00000036992 Samd9lQ69Z37 1561 aa32.75■■■□□ 2.83
Lmo1-201ENSMUST00000036992 Top2aQ01320 1528 aaKnown RBP32.72■■■□□ 2.83
Lmo1-201ENSMUST00000036992 Disp1Q3TDN0 1521 aa32.7■■■□□ 2.83
Lmo1-201ENSMUST00000036992 Efcab5A0JP43 1406 aa32.64■■■□□ 2.82
Lmo1-201ENSMUST00000036992 Setd1bQ8CFT2 1985 aa32.61■■■□□ 2.81
Lmo1-201ENSMUST00000036992 Chic1Q8CBW7 227 aa32.6■■■□□ 2.81
Lmo1-201ENSMUST00000036992 Pbrm1Q8BSQ9 1634 aaKnown RBP32.59■■■□□ 2.81
Lmo1-201ENSMUST00000036992 Nup160Q9Z0W3 1402 aaKnown RBP32.54■■■□□ 2.8
Lmo1-201ENSMUST00000036992 NrkQ9R0G8 1455 aa32.54■■■□□ 2.8
Lmo1-201ENSMUST00000036992 Rad54l2Q99NG0 1466 aa32.49■■■□□ 2.79
Lmo1-201ENSMUST00000036992 Pabpn1Q8CCS6 302 aaKnown RBP32.46■■■□□ 2.79
Lmo1-201ENSMUST00000036992 Cc2d2bA0A286YDU8 1405 aa32.45■■■□□ 2.79
Lmo1-201ENSMUST00000036992 PtprkP35822 1457 aa32.43■■■□□ 2.78
Lmo1-201ENSMUST00000036992 Shroom4Q1W617 1475 aa32.42■■■□□ 2.78
Lmo1-201ENSMUST00000036992 Magi3Q9EQJ9 1476 aa32.41■■■□□ 2.78
Lmo1-201ENSMUST00000036992 Grin2aP35436 1464 aa32.38■■■□□ 2.77
Lmo1-201ENSMUST00000036992 Col17a1Q07563 1470 aa32.36■■■□□ 2.77
Lmo1-201ENSMUST00000036992 Pelp1Q9DBD5 1123 aaKnown RBP32.33■■■□□ 2.77
Lmo1-201ENSMUST00000036992 AqrQ8CFQ3 1481 aaKnown RBP32.28■■■□□ 2.76
Lmo1-201ENSMUST00000036992 SynmQ70IV5 1561 aa32.26■■■□□ 2.75
Lmo1-201ENSMUST00000036992 Pla2r1Q62028 1487 aa32.23■■■□□ 2.75
Lmo1-201ENSMUST00000036992 Gpatch8A2A6A1 1505 aa32.2■■■□□ 2.74
Lmo1-201ENSMUST00000036992 Fgd6Q69ZL1 1399 aa32.1■■■□□ 2.73
Lmo1-201ENSMUST00000036992 Zeb1Q64318 1117 aa32.07■■■□□ 2.72
Lmo1-201ENSMUST00000036992 Zcchc11B2RX14 1644 aaKnown RBP32.06■■■□□ 2.72
Lmo1-201ENSMUST00000036992 Mroh2bQ7M6Y6 1581 aa31.98■■■□□ 2.71
Lmo1-201ENSMUST00000036992 Npm2Q80W85 207 aa31.96■■■□□ 2.71
Lmo1-201ENSMUST00000036992 AknaQ80VW7 1404 aa31.92■■■□□ 2.7
Retrieved 100 of 22,080 RNA–protein pairs in 79.8 ms