RNA–Protein interactions for RNA: ENSMUST00000034239.8

Katnb1-201, Transcript of Katanin p80 WD40 repeat-containing subunit B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Katnb1, Length 3,777 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Katnb1-201ENSMUST00000034239 Rpgrip1Q9EPQ2 1331 aa15.03■□□□□ -0
Katnb1-201ENSMUST00000034239 NischQ80TM9 1593 aa14.84□□□□□ -0.03
Katnb1-201ENSMUST00000034239 Gm35339A0A140LHH9 1649 aa14.73□□□□□ -0.05
Katnb1-201ENSMUST00000034239 Pcgf6Q99NA9 353 aa14.5□□□□□ -0.09
Katnb1-201ENSMUST00000034239 Rhox8Q6VSS7 320 aa14.47□□□□□ -0.09
Katnb1-201ENSMUST00000034239 Abcc9P70170 1546 aa14.44□□□□□ -0.1
Katnb1-201ENSMUST00000034239 Acin1Q9JIX8 1338 aaKnown RBP14.41□□□□□ -0.1
Katnb1-201ENSMUST00000034239 Ehmt2Q9Z148 1263 aaKnown RBP14.18□□□□□ -0.14
Katnb1-201ENSMUST00000034239 Abcc8B2RUS7 1588 aa14.15□□□□□ -0.14
Katnb1-201ENSMUST00000034239 Las1lA2BE28 776 aaKnown RBP14.09□□□□□ -0.15
Katnb1-201ENSMUST00000034239 Neurod1Q60867 357 aa14.06□□□□□ -0.16
Katnb1-201ENSMUST00000034239 Supt5hO55201 1082 aaKnown RBP13.98□□□□□ -0.17
Katnb1-201ENSMUST00000034239 CenpbP27790 599 aa13.94□□□□□ -0.18
Katnb1-201ENSMUST00000034239 DiexfQ8BTT6 772 aaKnown RBP13.93□□□□□ -0.18
Katnb1-201ENSMUST00000034239 Myt1Q8CFC2 1127 aa13.87□□□□□ -0.19
Katnb1-201ENSMUST00000034239 1700123L14RikQ3V2K7 440 aa13.84□□□□□ -0.19
Katnb1-201ENSMUST00000034239 Ccdc180J3QNE4 1664 aa13.75□□□□□ -0.21
Katnb1-201ENSMUST00000034239 Trim41Q5NCC3 630 aa13.74□□□□□ -0.21
Katnb1-201ENSMUST00000034239 Csrnp3P59055 597 aa13.67□□□□□ -0.22
Katnb1-201ENSMUST00000034239 Rtl1Q7M732 1744 aa13.64□□□□□ -0.23
Katnb1-201ENSMUST00000034239 Bcl11aQ9QYE3 773 aa13.61□□□□□ -0.23
Katnb1-201ENSMUST00000034239 Zeb1Q64318 1117 aa13.5□□□□□ -0.25
Katnb1-201ENSMUST00000034239 Anks4bQ8K3X6 423 aa13.5□□□□□ -0.25
Katnb1-201ENSMUST00000034239 Dcaf1Q80TR8 1506 aa13.43□□□□□ -0.26
Katnb1-201ENSMUST00000034239 Aplp2Q06335 707 aa13.4□□□□□ -0.26
Katnb1-201ENSMUST00000034239 Cngb1E1AZ71 1325 aa13.4□□□□□ -0.26
Katnb1-201ENSMUST00000034239 Gm38655A0A286YDK6 273 aa13.35□□□□□ -0.27
Katnb1-201ENSMUST00000034239 PrkcshO08795 521 aa13.33□□□□□ -0.27
Katnb1-201ENSMUST00000034239 Sall2Q9QX96 1004 aa13.3□□□□□ -0.28
Katnb1-201ENSMUST00000034239 Amer1Q7TS75 1132 aa13.27□□□□□ -0.29
Katnb1-201ENSMUST00000034239 ScribQ80U72 1612 aa13.25□□□□□ -0.29
Katnb1-201ENSMUST00000034239 Ccdc136Q3TVA9 1136 aa13.22□□□□□ -0.29
Katnb1-201ENSMUST00000034239 HrcG5E8J6 738 aa13.17□□□□□ -0.3
Katnb1-201ENSMUST00000034239 Cdk11bP24788 784 aaKnown RBP13.14□□□□□ -0.31
Katnb1-201ENSMUST00000034239 Ifnlr1Q8CGK5 535 aa13.11□□□□□ -0.31
Katnb1-201ENSMUST00000034239 Fam71e1A1L3C1 212 aa13.08□□□□□ -0.31
Katnb1-201ENSMUST00000034239 Nop58Q6DFW4 536 aaKnown RBP13.06□□□□□ -0.32
Katnb1-201ENSMUST00000034239 NefmP08553 848 aa13.05□□□□□ -0.32
Katnb1-201ENSMUST00000034239 Wdr66E9Q743 1299 aa13.04□□□□□ -0.32
Katnb1-201ENSMUST00000034239 Zcchc6Q5BLK4 1491 aaKnown RBP13.02□□□□□ -0.33
Katnb1-201ENSMUST00000034239 Rb1cc1Q9ESK9 1588 aa13□□□□□ -0.33
Katnb1-201ENSMUST00000034239 Kdm5dQ62240 1548 aa12.98□□□□□ -0.33
Katnb1-201ENSMUST00000034239 Mapk8ip2Q9ERE9 830 aa12.93□□□□□ -0.34
Katnb1-201ENSMUST00000034239 NacadQ5SWP3 1504 aa12.92□□□□□ -0.34
Katnb1-201ENSMUST00000034239 Ppargc1bQ8VHJ7 1014 aa12.91□□□□□ -0.34
Katnb1-201ENSMUST00000034239 Baz1aO88379 1555 aa12.86□□□□□ -0.35
Katnb1-201ENSMUST00000034239 Mier1Q5UAK0 511 aa12.86□□□□□ -0.35
Katnb1-201ENSMUST00000034239 Aebp2Q9Z248 504 aaKnown RBP12.83□□□□□ -0.36
Katnb1-201ENSMUST00000034239 SafbD3YXK2 937 aaKnown RBP12.82□□□□□ -0.36
Katnb1-201ENSMUST00000034239 Gab3Q8BSM5 595 aa12.8□□□□□ -0.36
Katnb1-201ENSMUST00000034239 ClspnQ80YR7 1315 aa12.74□□□□□ -0.37
Katnb1-201ENSMUST00000034239 Hdac5Q9Z2V6 1113 aa12.7□□□□□ -0.38
Katnb1-201ENSMUST00000034239 Hnrnpul2Q00PI9 745 aaKnown RBP12.7□□□□□ -0.38
Katnb1-201ENSMUST00000034239 Crybg2B7ZCC2 1516 aa12.69□□□□□ -0.38
Katnb1-201ENSMUST00000034239 Dnajc5bQ9CQ94 199 aa12.69□□□□□ -0.38
Katnb1-201ENSMUST00000034239 Ttbk1Q6PCN3 1308 aa12.68□□□□□ -0.38
Katnb1-201ENSMUST00000034239 Rtl5Q5DTT4 599 aa12.64□□□□□ -0.39
Katnb1-201ENSMUST00000034239 Pelp1Q9DBD5 1123 aaKnown RBP12.63□□□□□ -0.39
Katnb1-201ENSMUST00000034239 Sycp2Q9CUU3 1500 aa12.63□□□□□ -0.39
Katnb1-201ENSMUST00000034239 Anp32aO35381 247 aa12.63□□□□□ -0.39
Katnb1-201ENSMUST00000034239 Tnnt3Q9QZ47 272 aa12.63□□□□□ -0.39
Katnb1-201ENSMUST00000034239 Pknox2Q8BG99 474 aa12.58□□□□□ -0.4
Katnb1-201ENSMUST00000034239 Smarca2Q6DIC0 1577 aa12.56□□□□□ -0.4
Katnb1-201ENSMUST00000034239 Fgd1P52734 960 aa12.54□□□□□ -0.4
Katnb1-201ENSMUST00000034239 Ap3b1Q9Z1T1 1105 aa12.51□□□□□ -0.41
Katnb1-201ENSMUST00000034239 Esf1Q3V1V3 845 aaKnown RBP12.48□□□□□ -0.41
Katnb1-201ENSMUST00000034239 NrdcQ8BHG1 1161 aa12.46□□□□□ -0.41
Katnb1-201ENSMUST00000034239 Plcd4Q8K3R3 807 aa12.45□□□□□ -0.42
Katnb1-201ENSMUST00000034239 Gtf3c3Q3TMP1 882 aa12.44□□□□□ -0.42
Katnb1-201ENSMUST00000034239 Nolc1E9Q5C9 702 aaKnown RBP12.43□□□□□ -0.42
Katnb1-201ENSMUST00000034239 Cep164Q5DU05 1446 aa12.43□□□□□ -0.42
Katnb1-201ENSMUST00000034239 Il27Q8K3I6 234 aa12.42□□□□□ -0.42
Katnb1-201ENSMUST00000034239 UbtfP25976 765 aaKnown RBP12.41□□□□□ -0.42
Katnb1-201ENSMUST00000034239 TonslQ6NZL6 1363 aa12.37□□□□□ -0.43
Katnb1-201ENSMUST00000034239 Upf2A2AT37 1269 aaKnown RBP12.37□□□□□ -0.43
Katnb1-201ENSMUST00000034239 Supt16hQ920B9 1047 aa12.35□□□□□ -0.43
Katnb1-201ENSMUST00000034239 BicraF8VPZ9 1578 aa12.34□□□□□ -0.43
Katnb1-201ENSMUST00000034239 Myt1lP97500 1187 aa12.34□□□□□ -0.43
Katnb1-201ENSMUST00000034239 Irx3P81067 507 aa12.31□□□□□ -0.44
Katnb1-201ENSMUST00000034239 Calr4Q3TQS0 420 aa12.29□□□□□ -0.44
Katnb1-201ENSMUST00000034239 Ccdc27Q3V036 639 aa12.25□□□□□ -0.45
Katnb1-201ENSMUST00000034239 Brd4Q9ESU6 1400 aaKnown RBP12.25□□□□□ -0.45
Katnb1-201ENSMUST00000034239 Cecr2E9Q2Z1 1453 aa12.23□□□□□ -0.45
Katnb1-201ENSMUST00000034239 Ppp4r2Q0VGB7 417 aa12.22□□□□□ -0.45
Katnb1-201ENSMUST00000034239 Ccdc9Q8VC31 543 aaKnown RBP12.21□□□□□ -0.46
Katnb1-201ENSMUST00000034239 Stra8P70278 393 aa12.19□□□□□ -0.46
Katnb1-201ENSMUST00000034239 Znf710Q3U288 666 aa12.19□□□□□ -0.46
Katnb1-201ENSMUST00000034239 Npm2Q80W85 207 aa12.18□□□□□ -0.46
Katnb1-201ENSMUST00000034239 Ipo4Q8VI75 1082 aa12.16□□□□□ -0.46
Katnb1-201ENSMUST00000034239 Chic1Q8CBW7 227 aa12.16□□□□□ -0.46
Katnb1-201ENSMUST00000034239 Hsp90aa1P07901 733 aaKnown RBP12.15□□□□□ -0.46
Katnb1-201ENSMUST00000034239 4933416C03RikQ3V063 378 aa12.15□□□□□ -0.46
Katnb1-201ENSMUST00000034239 Wdr43Q6ZQL4 677 aaKnown RBP12.13□□□□□ -0.47
Katnb1-201ENSMUST00000034239 Synj1Q8CHC4 1574 aa12.13□□□□□ -0.47
Katnb1-201ENSMUST00000034239 Pak3Q61036 559 aa12.12□□□□□ -0.47
Katnb1-201ENSMUST00000034239 Pds5bQ4VA53 1446 aaKnown RBP12.1□□□□□ -0.47
Katnb1-201ENSMUST00000034239 CftrP26361 1476 aa12.09□□□□□ -0.47
Katnb1-201ENSMUST00000034239 Slc24a1Q91WD8 1130 aa12.07□□□□□ -0.48
Katnb1-201ENSMUST00000034239 Ubl4bQ9CQ84 188 aa12.07□□□□□ -0.48
Katnb1-201ENSMUST00000034239 Smarca4Q3TKT4 1613 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 22,080 RNA–protein pairs in 9.1 ms