RNA–Protein interactions for RNA: ENSMUST00000033882.9

Chrna6-201, Transcript of Neuronal acetylcholine receptor subunit alpha-6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Chrna6, Length 2,906 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna6-201ENSMUST00000033882 Gm35339A0A140LHH9 1649 aa11.73□□□□□ -0.53
Chrna6-201ENSMUST00000033882 NischQ80TM9 1593 aa11.58□□□□□ -0.56
Chrna6-201ENSMUST00000033882 Abcc9P70170 1546 aa11.31□□□□□ -0.6
Chrna6-201ENSMUST00000033882 Abcc8B2RUS7 1588 aa11.12□□□□□ -0.63
Chrna6-201ENSMUST00000033882 ScribQ80U72 1612 aa10.54□□□□□ -0.72
Chrna6-201ENSMUST00000033882 Dcaf1Q80TR8 1506 aa10.4□□□□□ -0.74
Chrna6-201ENSMUST00000033882 Ccdc180J3QNE4 1664 aa10.23□□□□□ -0.77
Chrna6-201ENSMUST00000033882 Kdm5dQ62240 1548 aa10.22□□□□□ -0.77
Chrna6-201ENSMUST00000033882 Rtl1Q7M732 1744 aa10.19□□□□□ -0.78
Chrna6-201ENSMUST00000033882 NacadQ5SWP3 1504 aa10.16□□□□□ -0.78
Chrna6-201ENSMUST00000033882 Rb1cc1Q9ESK9 1588 aa10.13□□□□□ -0.79
Chrna6-201ENSMUST00000033882 Rhox8Q6VSS7 320 aa10.1□□□□□ -0.79
Chrna6-201ENSMUST00000033882 Baz1aO88379 1555 aa10.04□□□□□ -0.8
Chrna6-201ENSMUST00000033882 Sycp2Q9CUU3 1500 aa9.97□□□□□ -0.81
Chrna6-201ENSMUST00000033882 Crybg2B7ZCC2 1516 aa9.96□□□□□ -0.81
Chrna6-201ENSMUST00000033882 Zcchc6Q5BLK4 1491 aaKnown RBP9.88□□□□□ -0.83
Chrna6-201ENSMUST00000033882 Smarca2Q6DIC0 1577 aa9.82□□□□□ -0.84
Chrna6-201ENSMUST00000033882 BicraF8VPZ9 1578 aa9.81□□□□□ -0.84
Chrna6-201ENSMUST00000033882 Cecr2E9Q2Z1 1453 aa9.55□□□□□ -0.88
Chrna6-201ENSMUST00000033882 Smarca4Q3TKT4 1613 aaKnown RBP9.48□□□□□ -0.89
Chrna6-201ENSMUST00000033882 Synj1Q8CHC4 1574 aa9.46□□□□□ -0.9
Chrna6-201ENSMUST00000033882 Cttnbp2B9EJA2 1648 aa9.44□□□□□ -0.9
Chrna6-201ENSMUST00000033882 Brd4Q9ESU6 1400 aaKnown RBP9.43□□□□□ -0.9
Chrna6-201ENSMUST00000033882 Ccdc136Q3TVA9 1136 aa9.43□□□□□ -0.9
Chrna6-201ENSMUST00000033882 CftrP26361 1476 aa9.4□□□□□ -0.9
Chrna6-201ENSMUST00000033882 Iqgap2Q3UQ44 1575 aa9.36□□□□□ -0.91
Chrna6-201ENSMUST00000033882 Atad2bE9Q166 1460 aaKnown RBP9.35□□□□□ -0.91
Chrna6-201ENSMUST00000033882 Top2bQ64511 1612 aa9.34□□□□□ -0.91
Chrna6-201ENSMUST00000033882 Trim41Q5NCC3 630 aa9.34□□□□□ -0.91
Chrna6-201ENSMUST00000033882 Pds5bQ4VA53 1446 aaKnown RBP9.33□□□□□ -0.92
Chrna6-201ENSMUST00000033882 HrcG5E8J6 738 aa9.31□□□□□ -0.92
Chrna6-201ENSMUST00000033882 Golga3P55937 1487 aa9.28□□□□□ -0.92
Chrna6-201ENSMUST00000033882 Wdr62Q3U3T8 1523 aa9.24□□□□□ -0.93
Chrna6-201ENSMUST00000033882 Thoc2B1AZI6 1594 aaKnown RBP9.23□□□□□ -0.93
Chrna6-201ENSMUST00000033882 Unc13aQ4KUS2 1712 aa9.23□□□□□ -0.93
Chrna6-201ENSMUST00000033882 Cc2d2aQ8CFW7 1633 aa9.2□□□□□ -0.94
Chrna6-201ENSMUST00000033882 Frmpd1A2AKB4 1549 aa9.19□□□□□ -0.94
Chrna6-201ENSMUST00000033882 Cep164Q5DU05 1446 aa9.18□□□□□ -0.94
Chrna6-201ENSMUST00000033882 TnnQ80Z71 1560 aa9.16□□□□□ -0.94
Chrna6-201ENSMUST00000033882 Rsf1E9PWW9 1441 aaKnown RBP9.15□□□□□ -0.94
Chrna6-201ENSMUST00000033882 Ccdc88bQ4QRL3 1481 aa9.14□□□□□ -0.95
Chrna6-201ENSMUST00000033882 Ercc6F8VPZ5 1481 aa9.12□□□□□ -0.95
Chrna6-201ENSMUST00000033882 Fmn1Q05860 1466 aa9.1□□□□□ -0.95
Chrna6-201ENSMUST00000033882 Lamc3Q9R0B6 1581 aa9.09□□□□□ -0.95
Chrna6-201ENSMUST00000033882 Fam135aQ6NS59 1506 aa9.07□□□□□ -0.96
Chrna6-201ENSMUST00000033882 Top2aQ01320 1528 aaKnown RBP9.07□□□□□ -0.96
Chrna6-201ENSMUST00000033882 Chic1Q8CBW7 227 aa9.04□□□□□ -0.96
Chrna6-201ENSMUST00000033882 Cngb1E1AZ71 1325 aa9.03□□□□□ -0.96
Chrna6-201ENSMUST00000033882 Esf1Q3V1V3 845 aaKnown RBP9.01□□□□□ -0.97
Chrna6-201ENSMUST00000033882 Baz1bQ9Z277 1479 aa8.98□□□□□ -0.97
Chrna6-201ENSMUST00000033882 Phldb1Q6PDH0 1371 aaKnown RBP8.97□□□□□ -0.97
Chrna6-201ENSMUST00000033882 Eif4g1Q6NZJ6 1600 aaKnown RBP8.96□□□□□ -0.98
Chrna6-201ENSMUST00000033882 Camsap1A2AHC3 1581 aa8.95□□□□□ -0.98
Chrna6-201ENSMUST00000033882 Rapgef2Q8CHG7 1496 aa8.94□□□□□ -0.98
Chrna6-201ENSMUST00000033882 Kif15Q6P9L6 1387 aa8.88□□□□□ -0.99
Chrna6-201ENSMUST00000033882 NrkQ9R0G8 1455 aa8.85□□□□□ -0.99
Chrna6-201ENSMUST00000033882 Grin2bQ01097 1482 aa8.84□□□□□ -0.99
Chrna6-201ENSMUST00000033882 Shroom4Q1W617 1475 aa8.82□□□□□ -1
Chrna6-201ENSMUST00000033882 Ccdc18Q640L5 1455 aa8.82□□□□□ -1
Chrna6-201ENSMUST00000033882 Cux2P70298 1426 aa8.81□□□□□ -1
Chrna6-201ENSMUST00000033882 PtprkP35822 1457 aa8.81□□□□□ -1
Chrna6-201ENSMUST00000033882 Cep162Q6ZQ06 1403 aa8.81□□□□□ -1
Chrna6-201ENSMUST00000033882 Kif21aQ9QXL2 1672 aa8.78□□□□□ -1
Chrna6-201ENSMUST00000033882 Dnajc5bQ9CQ94 199 aa8.78□□□□□ -1
Chrna6-201ENSMUST00000033882 Mrc2Q64449 1479 aa8.78□□□□□ -1
Chrna6-201ENSMUST00000033882 Arhgap35Q91YM2 1499 aa8.77□□□□□ -1.01
Chrna6-201ENSMUST00000033882 Map3k1P53349 1493 aa8.77□□□□□ -1.01
Chrna6-201ENSMUST00000033882 Ubl4bQ9CQ84 188 aa8.76□□□□□ -1.01
Chrna6-201ENSMUST00000033882 Gab3Q8BSM5 595 aa8.75□□□□□ -1.01
Chrna6-201ENSMUST00000033882 PogzQ8BZH4 1409 aaKnown RBP8.75□□□□□ -1.01
Chrna6-201ENSMUST00000033882 LrpprcQ6PB66 1392 aaKnown RBP8.73□□□□□ -1.01
Chrna6-201ENSMUST00000033882 Gpatch8A2A6A1 1505 aa8.72□□□□□ -1.01
Chrna6-201ENSMUST00000033882 AqrQ8CFQ3 1481 aaKnown RBP8.72□□□□□ -1.01
Chrna6-201ENSMUST00000033882 Efcab5A0JP43 1406 aa8.72□□□□□ -1.01
Chrna6-201ENSMUST00000033882 Mroh2bQ7M6Y6 1581 aa8.72□□□□□ -1.01
Chrna6-201ENSMUST00000033882 Samd9lQ69Z37 1561 aa8.72□□□□□ -1.01
Chrna6-201ENSMUST00000033882 Duox2A2AQ99 1517 aa8.71□□□□□ -1.02
Chrna6-201ENSMUST00000033882 Crocc2F6XLV1 1638 aa8.71□□□□□ -1.02
Chrna6-201ENSMUST00000033882 Erich3F6QRE9 1637 aa8.7□□□□□ -1.02
Chrna6-201ENSMUST00000033882 SynmQ70IV5 1561 aa8.67□□□□□ -1.02
Chrna6-201ENSMUST00000033882 Dhx29Q6PGC1 1365 aaKnown RBP8.66□□□□□ -1.02
Chrna6-201ENSMUST00000033882 Setd1bQ8CFT2 1985 aa8.66□□□□□ -1.02
Chrna6-201ENSMUST00000033882 Ankrd26Q811D2 1581 aa8.64□□□□□ -1.03
Chrna6-201ENSMUST00000033882 Lrriq1Q0P5X1 1673 aa8.63□□□□□ -1.03
Chrna6-201ENSMUST00000033882 Npm1Q61937 292 aaKnown RBP8.63□□□□□ -1.03
Chrna6-201ENSMUST00000033882 Lmo7E9PYF4 1699 aaKnown RBP8.63□□□□□ -1.03
Chrna6-201ENSMUST00000033882 Pbrm1Q8BSQ9 1634 aaKnown RBP8.63□□□□□ -1.03
Chrna6-201ENSMUST00000033882 Il27Q8K3I6 234 aa8.62□□□□□ -1.03
Chrna6-201ENSMUST00000033882 Urb2E9Q7L1 1524 aaKnown RBP8.61□□□□□ -1.03
Chrna6-201ENSMUST00000033882 Acin1Q9JIX8 1338 aaKnown RBP8.61□□□□□ -1.03
Chrna6-201ENSMUST00000033882 Magi3Q9EQJ9 1476 aa8.61□□□□□ -1.03
Chrna6-201ENSMUST00000033882 Arap1Q4LDD4 1452 aa8.6□□□□□ -1.03
Chrna6-201ENSMUST00000033882 Arhgef5E9Q7D5 1581 aa8.6□□□□□ -1.03
Chrna6-201ENSMUST00000033882 Pla2r1Q62028 1487 aa8.59□□□□□ -1.03
Chrna6-201ENSMUST00000033882 Carmil1Q6EDY6 1374 aa8.59□□□□□ -1.04
Chrna6-201ENSMUST00000033882 Clip1Q922J3 1391 aa8.59□□□□□ -1.04
Chrna6-201ENSMUST00000033882 Cux1P53564 1515 aa8.58□□□□□ -1.04
Chrna6-201ENSMUST00000033882 Polr1aO35134 1717 aaKnown RBP8.58□□□□□ -1.04
Chrna6-201ENSMUST00000033882 Plb1Q3TTY0 1478 aa8.58□□□□□ -1.04
Chrna6-201ENSMUST00000033882 Npm2Q80W85 207 aa8.58□□□□□ -1.04
Retrieved 100 of 22,080 RNA–protein pairs in 82.4 ms