RNA–Protein interactions for RNA: ENSMUST00000029885.4

Cpne3-201, Transcript of Copine-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpne3, Length 5,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3-201ENSMUST00000029885 Rpgrip1Q9EPQ2 1331 aa11.4□□□□□ -0.58
Cpne3-201ENSMUST00000029885 Las1lA2BE28 776 aaKnown RBP10.81□□□□□ -0.68
Cpne3-201ENSMUST00000029885 Myt1Q8CFC2 1127 aa10.65□□□□□ -0.7
Cpne3-201ENSMUST00000029885 Acin1Q9JIX8 1338 aaKnown RBP10.46□□□□□ -0.73
Cpne3-201ENSMUST00000029885 Cngb1E1AZ71 1325 aa10.42□□□□□ -0.74
Cpne3-201ENSMUST00000029885 CenpbP27790 599 aa10.38□□□□□ -0.75
Cpne3-201ENSMUST00000029885 Pcgf6Q99NA9 353 aa10.31□□□□□ -0.76
Cpne3-201ENSMUST00000029885 Rhox8Q6VSS7 320 aa10.28□□□□□ -0.76
Cpne3-201ENSMUST00000029885 DiexfQ8BTT6 772 aaKnown RBP10.24□□□□□ -0.77
Cpne3-201ENSMUST00000029885 Amer1Q7TS75 1132 aa10.13□□□□□ -0.79
Cpne3-201ENSMUST00000029885 Ccdc180J3QNE4 1664 aa10.06□□□□□ -0.8
Cpne3-201ENSMUST00000029885 Pelp1Q9DBD5 1123 aaKnown RBP10.04□□□□□ -0.8
Cpne3-201ENSMUST00000029885 Rtl1Q7M732 1744 aa10.04□□□□□ -0.8
Cpne3-201ENSMUST00000029885 Ehmt2Q9Z148 1263 aaKnown RBP10□□□□□ -0.81
Cpne3-201ENSMUST00000029885 Neurod1Q60867 357 aa9.88□□□□□ -0.83
Cpne3-201ENSMUST00000029885 Supt5hO55201 1082 aaKnown RBP9.87□□□□□ -0.83
Cpne3-201ENSMUST00000029885 NefmP08553 848 aa9.83□□□□□ -0.84
Cpne3-201ENSMUST00000029885 Zeb1Q64318 1117 aa9.81□□□□□ -0.84
Cpne3-201ENSMUST00000029885 Aplp2Q06335 707 aa9.81□□□□□ -0.84
Cpne3-201ENSMUST00000029885 Anks4bQ8K3X6 423 aa9.79□□□□□ -0.84
Cpne3-201ENSMUST00000029885 Rtl5Q5DTT4 599 aa9.78□□□□□ -0.84
Cpne3-201ENSMUST00000029885 Bcl11aQ9QYE3 773 aa9.74□□□□□ -0.85
Cpne3-201ENSMUST00000029885 Cdk11bP24788 784 aaKnown RBP9.73□□□□□ -0.85
Cpne3-201ENSMUST00000029885 1700123L14RikQ3V2K7 440 aa9.71□□□□□ -0.85
Cpne3-201ENSMUST00000029885 Wdr66E9Q743 1299 aa9.71□□□□□ -0.85
Cpne3-201ENSMUST00000029885 HrcG5E8J6 738 aa9.7□□□□□ -0.86
Cpne3-201ENSMUST00000029885 Dcaf1Q80TR8 1506 aa9.67□□□□□ -0.86
Cpne3-201ENSMUST00000029885 Tnnt3Q9QZ47 272 aa9.65□□□□□ -0.87
Cpne3-201ENSMUST00000029885 Trim41Q5NCC3 630 aa9.64□□□□□ -0.87
Cpne3-201ENSMUST00000029885 Csrnp3P59055 597 aa9.64□□□□□ -0.87
Cpne3-201ENSMUST00000029885 Nop58Q6DFW4 536 aaKnown RBP9.59□□□□□ -0.87
Cpne3-201ENSMUST00000029885 NischQ80TM9 1593 aa9.51□□□□□ -0.89
Cpne3-201ENSMUST00000029885 Stra8P70278 393 aa9.5□□□□□ -0.89
Cpne3-201ENSMUST00000029885 Anp32aO35381 247 aa9.45□□□□□ -0.9
Cpne3-201ENSMUST00000029885 Ccdc9Q8VC31 543 aaKnown RBP9.42□□□□□ -0.9
Cpne3-201ENSMUST00000029885 Sall2Q9QX96 1004 aa9.4□□□□□ -0.91
Cpne3-201ENSMUST00000029885 ClspnQ80YR7 1315 aa9.38□□□□□ -0.91
Cpne3-201ENSMUST00000029885 Ttbk1Q6PCN3 1308 aa9.32□□□□□ -0.92
Cpne3-201ENSMUST00000029885 Fam71e1A1L3C1 212 aa9.32□□□□□ -0.92
Cpne3-201ENSMUST00000029885 Gm38655A0A286YDK6 273 aa9.27□□□□□ -0.93
Cpne3-201ENSMUST00000029885 PrkcshO08795 521 aa9.26□□□□□ -0.93
Cpne3-201ENSMUST00000029885 4933416C03RikQ3V063 378 aa9.25□□□□□ -0.93
Cpne3-201ENSMUST00000029885 Mier1Q5UAK0 511 aa9.23□□□□□ -0.93
Cpne3-201ENSMUST00000029885 Ccdc136Q3TVA9 1136 aa9.19□□□□□ -0.94
Cpne3-201ENSMUST00000029885 Pknox2Q8BG99 474 aa9.17□□□□□ -0.94
Cpne3-201ENSMUST00000029885 TonslQ6NZL6 1363 aa9.15□□□□□ -0.95
Cpne3-201ENSMUST00000029885 NrdcQ8BHG1 1161 aa9.13□□□□□ -0.95
Cpne3-201ENSMUST00000029885 Irx3P81067 507 aa9.13□□□□□ -0.95
Cpne3-201ENSMUST00000029885 Ccdc27Q3V036 639 aa9.11□□□□□ -0.95
Cpne3-201ENSMUST00000029885 Hsp90aa1P07901 733 aaKnown RBP9.11□□□□□ -0.95
Cpne3-201ENSMUST00000029885 Abcc9P70170 1546 aa9.1□□□□□ -0.95
Cpne3-201ENSMUST00000029885 Myt1lP97500 1187 aa9.1□□□□□ -0.95
Cpne3-201ENSMUST00000029885 4930567H17RikQ3V0K5 233 aa9.09□□□□□ -0.95
Cpne3-201ENSMUST00000029885 Gm35339A0A140LHH9 1649 aa9.09□□□□□ -0.95
Cpne3-201ENSMUST00000029885 Gab3Q8BSM5 595 aa9.08□□□□□ -0.96
Cpne3-201ENSMUST00000029885 Mapk8ip2Q9ERE9 830 aa9.08□□□□□ -0.96
Cpne3-201ENSMUST00000029885 Hdac5Q9Z2V6 1113 aa9.08□□□□□ -0.96
Cpne3-201ENSMUST00000029885 UbtfP25976 765 aaKnown RBP9.06□□□□□ -0.96
Cpne3-201ENSMUST00000029885 Gtf3c3Q3TMP1 882 aa9.04□□□□□ -0.96
Cpne3-201ENSMUST00000029885 Upf2A2AT37 1269 aaKnown RBP9.04□□□□□ -0.96
Cpne3-201ENSMUST00000029885 Calr4Q3TQS0 420 aa9.03□□□□□ -0.96
Cpne3-201ENSMUST00000029885 NeflP08551 543 aa9.03□□□□□ -0.96
Cpne3-201ENSMUST00000029885 Ythdc1E9Q5K9 736 aaKnown RBP9.02□□□□□ -0.97
Cpne3-201ENSMUST00000029885 Cep164Q5DU05 1446 aa9.02□□□□□ -0.97
Cpne3-201ENSMUST00000029885 CatipB9EKE5 520 aa9.02□□□□□ -0.97
Cpne3-201ENSMUST00000029885 DaxxO35613 739 aa9.01□□□□□ -0.97
Cpne3-201ENSMUST00000029885 Zcchc6Q5BLK4 1491 aaKnown RBP9.01□□□□□ -0.97
Cpne3-201ENSMUST00000029885 Ppargc1bQ8VHJ7 1014 aa9□□□□□ -0.97
Cpne3-201ENSMUST00000029885 Wdr43Q6ZQL4 677 aaKnown RBP8.97□□□□□ -0.97
Cpne3-201ENSMUST00000029885 Fgd1P52734 960 aa8.96□□□□□ -0.98
Cpne3-201ENSMUST00000029885 Hnrnpul2Q00PI9 745 aaKnown RBP8.96□□□□□ -0.98
Cpne3-201ENSMUST00000029885 Aebp2Q9Z248 504 aaKnown RBP8.95□□□□□ -0.98
Cpne3-201ENSMUST00000029885 Ifnlr1Q8CGK5 535 aa8.94□□□□□ -0.98
Cpne3-201ENSMUST00000029885 SafbD3YXK2 937 aaKnown RBP8.93□□□□□ -0.98
Cpne3-201ENSMUST00000029885 Ppp4r2Q0VGB7 417 aa8.93□□□□□ -0.98
Cpne3-201ENSMUST00000029885 Anp32bQ9EST5 272 aaKnown RBP8.93□□□□□ -0.98
Cpne3-201ENSMUST00000029885 BccipQ9CWI3 316 aa8.91□□□□□ -0.98
Cpne3-201ENSMUST00000029885 Slc24a1Q91WD8 1130 aa8.9□□□□□ -0.99
Cpne3-201ENSMUST00000029885 Supt16hQ920B9 1047 aa8.87□□□□□ -0.99
Cpne3-201ENSMUST00000029885 Eif5bQ05D44 1216 aaKnown RBP8.86□□□□□ -0.99
Cpne3-201ENSMUST00000029885 Ipo4Q8VI75 1082 aa8.85□□□□□ -0.99
Cpne3-201ENSMUST00000029885 Znf316Q6PGE4 1016 aa8.84□□□□□ -0.99
Cpne3-201ENSMUST00000029885 Ap3b1Q9Z1T1 1105 aa8.84□□□□□ -0.99
Cpne3-201ENSMUST00000029885 Plcd4Q8K3R3 807 aa8.83□□□□□ -1
Cpne3-201ENSMUST00000029885 AU015836B2RUM3 263 aa8.82□□□□□ -1
Cpne3-201ENSMUST00000029885 NclP09405 707 aaKnown RBP8.82□□□□□ -1
Cpne3-201ENSMUST00000029885 Ipo9Q91YE6 1041 aa8.79□□□□□ -1
Cpne3-201ENSMUST00000029885 Pdcl3Q8BVF2 240 aa8.79□□□□□ -1
Cpne3-201ENSMUST00000029885 Nolc1E9Q5C9 702 aaKnown RBP8.77□□□□□ -1.01
Cpne3-201ENSMUST00000029885 Gtf3c5Q8R2T8 520 aa8.77□□□□□ -1.01
Cpne3-201ENSMUST00000029885 Dnttip2Q8R2M2 758 aaKnown RBP8.74□□□□□ -1.01
Cpne3-201ENSMUST00000029885 Rrp9Q91WM3 475 aaKnown RBP8.7□□□□□ -1.02
Cpne3-201ENSMUST00000029885 Abcc8B2RUS7 1588 aa8.69□□□□□ -1.02
Cpne3-201ENSMUST00000029885 Npm2Q80W85 207 aa8.69□□□□□ -1.02
Cpne3-201ENSMUST00000029885 Gtf2a1Q99PM3 378 aa8.69□□□□□ -1.02
Cpne3-201ENSMUST00000029885 Esf1Q3V1V3 845 aaKnown RBP8.68□□□□□ -1.02
Cpne3-201ENSMUST00000029885 4933402E13RikQ9D4D2 429 aa8.67□□□□□ -1.02
Cpne3-201ENSMUST00000029885 Tnnt2P50752 301 aa8.66□□□□□ -1.02
Cpne3-201ENSMUST00000029885 Tcerg1Q8CGF7 1100 aaKnown RBP8.66□□□□□ -1.02
Cpne3-201ENSMUST00000029885 Ube2uB1AUC4 352 aa8.66□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 123 ms