RNA–Protein interactions for RNA: ENSMUST00000029885.4

Cpne3-201, Transcript of Copine-3, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cpne3, Length 5,648 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3-201ENSMUST00000029885 Rpgrip1Q9EPQ2 1331 aa11.4□□□□□ -0.58
Cpne3-201ENSMUST00000029885 Las1lA2BE28 776 aaKnown RBP10.81□□□□□ -0.68
Cpne3-201ENSMUST00000029885 Myt1Q8CFC2 1127 aa10.65□□□□□ -0.7
Cpne3-201ENSMUST00000029885 Acin1Q9JIX8 1338 aaKnown RBP10.46□□□□□ -0.73
Cpne3-201ENSMUST00000029885 Cngb1E1AZ71 1325 aa10.42□□□□□ -0.74
Cpne3-201ENSMUST00000029885 CenpbP27790 599 aa10.38□□□□□ -0.75
Cpne3-201ENSMUST00000029885 Pcgf6Q99NA9 353 aa10.31□□□□□ -0.76
Cpne3-201ENSMUST00000029885 Rhox8Q6VSS7 320 aa10.28□□□□□ -0.76
Cpne3-201ENSMUST00000029885 DiexfQ8BTT6 772 aaKnown RBP10.24□□□□□ -0.77
Cpne3-201ENSMUST00000029885 Amer1Q7TS75 1132 aa10.13□□□□□ -0.79
Cpne3-201ENSMUST00000029885 Ccdc180J3QNE4 1664 aa10.06□□□□□ -0.8
Cpne3-201ENSMUST00000029885 Pelp1Q9DBD5 1123 aaKnown RBP10.04□□□□□ -0.8
Cpne3-201ENSMUST00000029885 Rtl1Q7M732 1744 aa10.04□□□□□ -0.8
Cpne3-201ENSMUST00000029885 Ehmt2Q9Z148 1263 aaKnown RBP10□□□□□ -0.81
Cpne3-201ENSMUST00000029885 Neurod1Q60867 357 aa9.88□□□□□ -0.83
Cpne3-201ENSMUST00000029885 Supt5hO55201 1082 aaKnown RBP9.87□□□□□ -0.83
Cpne3-201ENSMUST00000029885 NefmP08553 848 aa9.83□□□□□ -0.84
Cpne3-201ENSMUST00000029885 Zeb1Q64318 1117 aa9.81□□□□□ -0.84
Cpne3-201ENSMUST00000029885 Aplp2Q06335 707 aa9.81□□□□□ -0.84
Cpne3-201ENSMUST00000029885 Anks4bQ8K3X6 423 aa9.79□□□□□ -0.84
Cpne3-201ENSMUST00000029885 Rtl5Q5DTT4 599 aa9.78□□□□□ -0.84
Cpne3-201ENSMUST00000029885 Bcl11aQ9QYE3 773 aa9.74□□□□□ -0.85
Cpne3-201ENSMUST00000029885 Cdk11bP24788 784 aaKnown RBP9.73□□□□□ -0.85
Cpne3-201ENSMUST00000029885 1700123L14RikQ3V2K7 440 aa9.71□□□□□ -0.85
Cpne3-201ENSMUST00000029885 Wdr66E9Q743 1299 aa9.71□□□□□ -0.85
Cpne3-201ENSMUST00000029885 HrcG5E8J6 738 aa9.7□□□□□ -0.86
Cpne3-201ENSMUST00000029885 Dcaf1Q80TR8 1506 aa9.67□□□□□ -0.86
Cpne3-201ENSMUST00000029885 Tnnt3Q9QZ47 272 aa9.65□□□□□ -0.87
Cpne3-201ENSMUST00000029885 Trim41Q5NCC3 630 aa9.64□□□□□ -0.87
Cpne3-201ENSMUST00000029885 Csrnp3P59055 597 aa9.64□□□□□ -0.87
Cpne3-201ENSMUST00000029885 Nop58Q6DFW4 536 aaKnown RBP9.59□□□□□ -0.87
Cpne3-201ENSMUST00000029885 NischQ80TM9 1593 aa9.51□□□□□ -0.89
Cpne3-201ENSMUST00000029885 Stra8P70278 393 aa9.5□□□□□ -0.89
Cpne3-201ENSMUST00000029885 Anp32aO35381 247 aa9.45□□□□□ -0.9
Cpne3-201ENSMUST00000029885 Ccdc9Q8VC31 543 aaKnown RBP9.42□□□□□ -0.9
Cpne3-201ENSMUST00000029885 Sall2Q9QX96 1004 aa9.4□□□□□ -0.91
Cpne3-201ENSMUST00000029885 ClspnQ80YR7 1315 aa9.38□□□□□ -0.91
Cpne3-201ENSMUST00000029885 Ttbk1Q6PCN3 1308 aa9.32□□□□□ -0.92
Cpne3-201ENSMUST00000029885 Fam71e1A1L3C1 212 aa9.32□□□□□ -0.92
Cpne3-201ENSMUST00000029885 Gm38655A0A286YDK6 273 aa9.27□□□□□ -0.93
Cpne3-201ENSMUST00000029885 PrkcshO08795 521 aa9.26□□□□□ -0.93
Cpne3-201ENSMUST00000029885 4933416C03RikQ3V063 378 aa9.25□□□□□ -0.93
Cpne3-201ENSMUST00000029885 Mier1Q5UAK0 511 aa9.23□□□□□ -0.93
Cpne3-201ENSMUST00000029885 Ccdc136Q3TVA9 1136 aa9.19□□□□□ -0.94
Cpne3-201ENSMUST00000029885 Pknox2Q8BG99 474 aa9.17□□□□□ -0.94
Cpne3-201ENSMUST00000029885 TonslQ6NZL6 1363 aa9.15□□□□□ -0.95
Cpne3-201ENSMUST00000029885 NrdcQ8BHG1 1161 aa9.13□□□□□ -0.95
Cpne3-201ENSMUST00000029885 Irx3P81067 507 aa9.13□□□□□ -0.95
Cpne3-201ENSMUST00000029885 Ccdc27Q3V036 639 aa9.11□□□□□ -0.95
Cpne3-201ENSMUST00000029885 Hsp90aa1P07901 733 aaKnown RBP9.11□□□□□ -0.95
Cpne3-201ENSMUST00000029885 Abcc9P70170 1546 aa9.1□□□□□ -0.95
Cpne3-201ENSMUST00000029885 Myt1lP97500 1187 aa9.1□□□□□ -0.95
Cpne3-201ENSMUST00000029885 4930567H17RikQ3V0K5 233 aa9.09□□□□□ -0.95
Cpne3-201ENSMUST00000029885 Gm35339A0A140LHH9 1649 aa9.09□□□□□ -0.95
Cpne3-201ENSMUST00000029885 Gab3Q8BSM5 595 aa9.08□□□□□ -0.96
Cpne3-201ENSMUST00000029885 Mapk8ip2Q9ERE9 830 aa9.08□□□□□ -0.96
Cpne3-201ENSMUST00000029885 Hdac5Q9Z2V6 1113 aa9.08□□□□□ -0.96
Cpne3-201ENSMUST00000029885 UbtfP25976 765 aaKnown RBP9.06□□□□□ -0.96
Cpne3-201ENSMUST00000029885 Gtf3c3Q3TMP1 882 aa9.04□□□□□ -0.96
Cpne3-201ENSMUST00000029885 Upf2A2AT37 1269 aaKnown RBP9.04□□□□□ -0.96
Cpne3-201ENSMUST00000029885 Calr4Q3TQS0 420 aa9.03□□□□□ -0.96
Cpne3-201ENSMUST00000029885 NeflP08551 543 aa9.03□□□□□ -0.96
Cpne3-201ENSMUST00000029885 Ythdc1E9Q5K9 736 aaKnown RBP9.02□□□□□ -0.97
Cpne3-201ENSMUST00000029885 Cep164Q5DU05 1446 aa9.02□□□□□ -0.97
Cpne3-201ENSMUST00000029885 CatipB9EKE5 520 aa9.02□□□□□ -0.97
Cpne3-201ENSMUST00000029885 DaxxO35613 739 aa9.01□□□□□ -0.97
Cpne3-201ENSMUST00000029885 Zcchc6Q5BLK4 1491 aaKnown RBP9.01□□□□□ -0.97
Cpne3-201ENSMUST00000029885 Ppargc1bQ8VHJ7 1014 aa9□□□□□ -0.97
Cpne3-201ENSMUST00000029885 Wdr43Q6ZQL4 677 aaKnown RBP8.97□□□□□ -0.97
Cpne3-201ENSMUST00000029885 Fgd1P52734 960 aa8.96□□□□□ -0.98
Cpne3-201ENSMUST00000029885 Hnrnpul2Q00PI9 745 aaKnown RBP8.96□□□□□ -0.98
Cpne3-201ENSMUST00000029885 Aebp2Q9Z248 504 aaKnown RBP8.95□□□□□ -0.98
Cpne3-201ENSMUST00000029885 Ifnlr1Q8CGK5 535 aa8.94□□□□□ -0.98
Cpne3-201ENSMUST00000029885 SafbD3YXK2 937 aaKnown RBP8.93□□□□□ -0.98
Cpne3-201ENSMUST00000029885 Ppp4r2Q0VGB7 417 aa8.93□□□□□ -0.98
Cpne3-201ENSMUST00000029885 Anp32bQ9EST5 272 aaKnown RBP8.93□□□□□ -0.98
Cpne3-201ENSMUST00000029885 BccipQ9CWI3 316 aa8.91□□□□□ -0.98
Cpne3-201ENSMUST00000029885 Slc24a1Q91WD8 1130 aa8.9□□□□□ -0.99
Cpne3-201ENSMUST00000029885 Supt16hQ920B9 1047 aa8.87□□□□□ -0.99
Cpne3-201ENSMUST00000029885 Eif5bQ05D44 1216 aaKnown RBP8.86□□□□□ -0.99
Cpne3-201ENSMUST00000029885 Ipo4Q8VI75 1082 aa8.85□□□□□ -0.99
Cpne3-201ENSMUST00000029885 Znf316Q6PGE4 1016 aa8.84□□□□□ -0.99
Cpne3-201ENSMUST00000029885 Ap3b1Q9Z1T1 1105 aa8.84□□□□□ -0.99
Cpne3-201ENSMUST00000029885 Plcd4Q8K3R3 807 aa8.83□□□□□ -1
Cpne3-201ENSMUST00000029885 AU015836B2RUM3 263 aa8.82□□□□□ -1
Cpne3-201ENSMUST00000029885 NclP09405 707 aaKnown RBP8.82□□□□□ -1
Cpne3-201ENSMUST00000029885 Ipo9Q91YE6 1041 aa8.79□□□□□ -1
Cpne3-201ENSMUST00000029885 Pdcl3Q8BVF2 240 aa8.79□□□□□ -1
Cpne3-201ENSMUST00000029885 Nolc1E9Q5C9 702 aaKnown RBP8.77□□□□□ -1.01
Cpne3-201ENSMUST00000029885 Gtf3c5Q8R2T8 520 aa8.77□□□□□ -1.01
Cpne3-201ENSMUST00000029885 Dnttip2Q8R2M2 758 aaKnown RBP8.74□□□□□ -1.01
Cpne3-201ENSMUST00000029885 Rrp9Q91WM3 475 aaKnown RBP8.7□□□□□ -1.02
Cpne3-201ENSMUST00000029885 Abcc8B2RUS7 1588 aa8.69□□□□□ -1.02
Cpne3-201ENSMUST00000029885 Npm2Q80W85 207 aa8.69□□□□□ -1.02
Cpne3-201ENSMUST00000029885 Gtf2a1Q99PM3 378 aa8.69□□□□□ -1.02
Cpne3-201ENSMUST00000029885 Esf1Q3V1V3 845 aaKnown RBP8.68□□□□□ -1.02
Cpne3-201ENSMUST00000029885 4933402E13RikQ9D4D2 429 aa8.67□□□□□ -1.02
Cpne3-201ENSMUST00000029885 Tnnt2P50752 301 aa8.66□□□□□ -1.02
Cpne3-201ENSMUST00000029885 Tcerg1Q8CGF7 1100 aaKnown RBP8.66□□□□□ -1.02
Cpne3-201ENSMUST00000029885 Ube2uB1AUC4 352 aa8.66□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 11.2 ms