RNA–Protein interactions for RNA: ENSMUST00000028646.3

Tspan18-201, Transcript of Tetraspanin-18, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Tspan18, Length 1,203 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tspan18-201ENSMUST00000028646 Gm35339A0A140LHH9 1649 aa35.16■■■■□ 3.22
Tspan18-201ENSMUST00000028646 NischQ80TM9 1593 aa34.52■■■■□ 3.12
Tspan18-201ENSMUST00000028646 Abcc8B2RUS7 1588 aa33.44■■■□□ 2.94
Tspan18-201ENSMUST00000028646 Abcc9P70170 1546 aa33.39■■■□□ 2.94
Tspan18-201ENSMUST00000028646 ScribQ80U72 1612 aa32.39■■■□□ 2.78
Tspan18-201ENSMUST00000028646 NacadQ5SWP3 1504 aa31.39■■■□□ 2.61
Tspan18-201ENSMUST00000028646 Kdm5dQ62240 1548 aa31.26■■■□□ 2.59
Tspan18-201ENSMUST00000028646 Dcaf1Q80TR8 1506 aa30.78■■■□□ 2.52
Tspan18-201ENSMUST00000028646 Sycp2Q9CUU3 1500 aa30.76■■■□□ 2.51
Tspan18-201ENSMUST00000028646 BicraF8VPZ9 1578 aa30.34■■■□□ 2.45
Tspan18-201ENSMUST00000028646 Rb1cc1Q9ESK9 1588 aa30.07■■■□□ 2.4
Tspan18-201ENSMUST00000028646 Dnajc5bQ9CQ94 199 aa29.75■■■□□ 2.35
Tspan18-201ENSMUST00000028646 Ccdc180J3QNE4 1664 aa29.72■■■□□ 2.35
Tspan18-201ENSMUST00000028646 Baz1aO88379 1555 aa29.64■■■□□ 2.34
Tspan18-201ENSMUST00000028646 Crybg2B7ZCC2 1516 aa29.64■■■□□ 2.34
Tspan18-201ENSMUST00000028646 Pds5bQ4VA53 1446 aaKnown RBP29.62■■■□□ 2.33
Tspan18-201ENSMUST00000028646 Rhox8Q6VSS7 320 aa29.48■■■□□ 2.31
Tspan18-201ENSMUST00000028646 Thoc2B1AZI6 1594 aaKnown RBP29.45■■■□□ 2.31
Tspan18-201ENSMUST00000028646 Atad2bE9Q166 1460 aaKnown RBP29.27■■■□□ 2.28
Tspan18-201ENSMUST00000028646 Zcchc6Q5BLK4 1491 aaKnown RBP29.19■■■□□ 2.26
Tspan18-201ENSMUST00000028646 Ercc6F8VPZ5 1481 aa28.98■■■□□ 2.23
Tspan18-201ENSMUST00000028646 Cc2d2aQ8CFW7 1633 aa28.94■■■□□ 2.22
Tspan18-201ENSMUST00000028646 Smarca4Q3TKT4 1613 aaKnown RBP28.93■■■□□ 2.22
Tspan18-201ENSMUST00000028646 Smarca2Q6DIC0 1577 aa28.9■■■□□ 2.22
Tspan18-201ENSMUST00000028646 Iqgap2Q3UQ44 1575 aa28.79■■■□□ 2.2
Tspan18-201ENSMUST00000028646 Fam135aQ6NS59 1506 aa28.74■■■□□ 2.19
Tspan18-201ENSMUST00000028646 Cecr2E9Q2Z1 1453 aa28.66■■■□□ 2.18
Tspan18-201ENSMUST00000028646 Wdr62Q3U3T8 1523 aa28.6■■■□□ 2.17
Tspan18-201ENSMUST00000028646 Baz1bQ9Z277 1479 aa28.55■■■□□ 2.16
Tspan18-201ENSMUST00000028646 Frmpd1A2AKB4 1549 aa28.52■■■□□ 2.16
Tspan18-201ENSMUST00000028646 Phldb1Q6PDH0 1371 aaKnown RBP28.47■■■□□ 2.15
Tspan18-201ENSMUST00000028646 Ubl4bQ9CQ84 188 aa28.15■■■□□ 2.1
Tspan18-201ENSMUST00000028646 Unc13aQ4KUS2 1712 aa28.15■■■□□ 2.1
Tspan18-201ENSMUST00000028646 Rtl1Q7M732 1744 aa28.15■■■□□ 2.1
Tspan18-201ENSMUST00000028646 Cttnbp2B9EJA2 1648 aa28.07■■■□□ 2.08
Tspan18-201ENSMUST00000028646 Mrc2Q64449 1479 aa28.05■■■□□ 2.08
Tspan18-201ENSMUST00000028646 CftrP26361 1476 aa28.04■■■□□ 2.08
Tspan18-201ENSMUST00000028646 Brd4Q9ESU6 1400 aaKnown RBP27.94■■■□□ 2.06
Tspan18-201ENSMUST00000028646 Synj1Q8CHC4 1574 aa27.93■■■□□ 2.06
Tspan18-201ENSMUST00000028646 Ccdc136Q3TVA9 1136 aa27.61■■■□□ 2.01
Tspan18-201ENSMUST00000028646 Esf1Q3V1V3 845 aaKnown RBP27.49■■□□□ 1.99
Tspan18-201ENSMUST00000028646 Rsf1E9PWW9 1441 aaKnown RBP27.49■■□□□ 1.99
Tspan18-201ENSMUST00000028646 Cux2P70298 1426 aa27.46■■□□□ 1.99
Tspan18-201ENSMUST00000028646 Lrriq1Q0P5X1 1673 aa27.45■■□□□ 1.98
Tspan18-201ENSMUST00000028646 Kif15Q6P9L6 1387 aa27.41■■□□□ 1.98
Tspan18-201ENSMUST00000028646 Lamc3Q9R0B6 1581 aa27.31■■□□□ 1.96
Tspan18-201ENSMUST00000028646 Kif21aQ9QXL2 1672 aa27.31■■□□□ 1.96
Tspan18-201ENSMUST00000028646 Dnajc5P60904 198 aa27.3■■□□□ 1.96
Tspan18-201ENSMUST00000028646 Trim41Q5NCC3 630 aa27.29■■□□□ 1.96
Tspan18-201ENSMUST00000028646 Npm1Q61937 292 aaKnown RBP27.16■■□□□ 1.94
Tspan18-201ENSMUST00000028646 Eif4g3Q80XI3 1579 aaKnown RBP27.09■■□□□ 1.93
Tspan18-201ENSMUST00000028646 Cep164Q5DU05 1446 aa27.09■■□□□ 1.93
Tspan18-201ENSMUST00000028646 Ccdc18Q640L5 1455 aa26.93■■□□□ 1.9
Tspan18-201ENSMUST00000028646 TnnQ80Z71 1560 aa26.93■■□□□ 1.9
Tspan18-201ENSMUST00000028646 Shroom2A2ALU4 1481 aa26.91■■□□□ 1.9
Tspan18-201ENSMUST00000028646 Dhx29Q6PGC1 1365 aaKnown RBP26.86■■□□□ 1.89
Tspan18-201ENSMUST00000028646 Urb2E9Q7L1 1524 aaKnown RBP26.86■■□□□ 1.89
Tspan18-201ENSMUST00000028646 Top2bQ64511 1612 aa26.86■■□□□ 1.89
Tspan18-201ENSMUST00000028646 Golga3P55937 1487 aa26.82■■□□□ 1.88
Tspan18-201ENSMUST00000028646 Plb1Q3TTY0 1478 aa26.81■■□□□ 1.88
Tspan18-201ENSMUST00000028646 LrpprcQ6PB66 1392 aaKnown RBP26.8■■□□□ 1.88
Tspan18-201ENSMUST00000028646 Camsap1A2AHC3 1581 aa26.78■■□□□ 1.88
Tspan18-201ENSMUST00000028646 Crocc2F6XLV1 1638 aa26.78■■□□□ 1.88
Tspan18-201ENSMUST00000028646 Il27Q8K3I6 234 aa26.73■■□□□ 1.87
Tspan18-201ENSMUST00000028646 Ift140E9PY46 1464 aa26.63■■□□□ 1.85
Tspan18-201ENSMUST00000028646 Cngb1E1AZ71 1325 aa26.63■■□□□ 1.85
Tspan18-201ENSMUST00000028646 PogzQ8BZH4 1409 aaKnown RBP26.62■■□□□ 1.85
Tspan18-201ENSMUST00000028646 Fmn1Q05860 1466 aa26.61■■□□□ 1.85
Tspan18-201ENSMUST00000028646 Rusc2Q80U22 1514 aa26.58■■□□□ 1.85
Tspan18-201ENSMUST00000028646 Pabpn1Q8CCS6 302 aaKnown RBP26.54■■□□□ 1.84
Tspan18-201ENSMUST00000028646 Col17a1Q07563 1470 aa26.52■■□□□ 1.84
Tspan18-201ENSMUST00000028646 Duox2A2AQ99 1517 aa26.47■■□□□ 1.83
Tspan18-201ENSMUST00000028646 Grin2bQ01097 1482 aa26.38■■□□□ 1.81
Tspan18-201ENSMUST00000028646 Pbrm1Q8BSQ9 1634 aaKnown RBP26.35■■□□□ 1.81
Tspan18-201ENSMUST00000028646 Disp1Q3TDN0 1521 aa26.34■■□□□ 1.81
Tspan18-201ENSMUST00000028646 Zcchc11B2RX14 1644 aaKnown RBP26.31■■□□□ 1.8
Tspan18-201ENSMUST00000028646 Pelp1Q9DBD5 1123 aaKnown RBP26.3■■□□□ 1.8
Tspan18-201ENSMUST00000028646 Cc2d2bA0A286YDU8 1405 aa26.28■■□□□ 1.8
Tspan18-201ENSMUST00000028646 Nup160Q9Z0W3 1402 aaKnown RBP26.27■■□□□ 1.8
Tspan18-201ENSMUST00000028646 Samd9lQ69Z37 1561 aa26.26■■□□□ 1.79
Tspan18-201ENSMUST00000028646 Efcab5A0JP43 1406 aa26.26■■□□□ 1.79
Tspan18-201ENSMUST00000028646 Setd1bQ8CFT2 1985 aa26.25■■□□□ 1.79
Tspan18-201ENSMUST00000028646 Grin2aP35436 1464 aa26.06■■□□□ 1.76
Tspan18-201ENSMUST00000028646 AqrQ8CFQ3 1481 aaKnown RBP26.06■■□□□ 1.76
Tspan18-201ENSMUST00000028646 NrkQ9R0G8 1455 aa26.06■■□□□ 1.76
Tspan18-201ENSMUST00000028646 Rad54l2Q99NG0 1466 aa26.04■■□□□ 1.76
Tspan18-201ENSMUST00000028646 Magi3Q9EQJ9 1476 aa26.03■■□□□ 1.76
Tspan18-201ENSMUST00000028646 Top2aQ01320 1528 aaKnown RBP26.03■■□□□ 1.76
Tspan18-201ENSMUST00000028646 Fgd6Q69ZL1 1399 aa26.01■■□□□ 1.75
Tspan18-201ENSMUST00000028646 Ccdc88bQ4QRL3 1481 aa25.97■■□□□ 1.75
Tspan18-201ENSMUST00000028646 Gpatch8A2A6A1 1505 aa25.96■■□□□ 1.75
Tspan18-201ENSMUST00000028646 Adgrl3Q80TS3 1537 aa25.92■■□□□ 1.74
Tspan18-201ENSMUST00000028646 PtprkP35822 1457 aa25.91■■□□□ 1.74
Tspan18-201ENSMUST00000028646 Shroom4Q1W617 1475 aa25.91■■□□□ 1.74
Tspan18-201ENSMUST00000028646 Cep170Q6A065 1588 aa25.88■■□□□ 1.73
Tspan18-201ENSMUST00000028646 Gapvd1Q6PAR5 1458 aa25.86■■□□□ 1.73
Tspan18-201ENSMUST00000028646 SynmQ70IV5 1561 aa25.86■■□□□ 1.73
Tspan18-201ENSMUST00000028646 Pla2r1Q62028 1487 aa25.84■■□□□ 1.73
Tspan18-201ENSMUST00000028646 Arhgef5E9Q7D5 1581 aa25.83■■□□□ 1.73
Tspan18-201ENSMUST00000028646 AknaQ80VW7 1404 aa25.77■■□□□ 1.72
Retrieved 100 of 22,080 RNA–protein pairs in 40 ms