RNA–Protein interactions for RNA: ENSMUST00000025262.5

Ltb-201, Transcript of Lymphotoxin-beta, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ltb, Length 1,160 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ltb-201ENSMUST00000025262 Gm35339A0A140LHH9 1649 aa46.03■■■■■ 4.96
Ltb-201ENSMUST00000025262 NischQ80TM9 1593 aa45.03■■■■■ 4.8
Ltb-201ENSMUST00000025262 Abcc9P70170 1546 aa44.19■■■■■ 4.66
Ltb-201ENSMUST00000025262 Abcc8B2RUS7 1588 aa43.9■■■■■ 4.62
Ltb-201ENSMUST00000025262 ScribQ80U72 1612 aa43.01■■■■■ 4.48
Ltb-201ENSMUST00000025262 NacadQ5SWP3 1504 aa41.42■■■■■ 4.22
Ltb-201ENSMUST00000025262 Kdm5dQ62240 1548 aa41.32■■■■■ 4.2
Ltb-201ENSMUST00000025262 Dnajc5bQ9CQ94 199 aa41.05■■■■■ 4.16
Ltb-201ENSMUST00000025262 Sycp2Q9CUU3 1500 aa40.72■■■■■ 4.11
Ltb-201ENSMUST00000025262 BicraF8VPZ9 1578 aa40.38■■■■■ 4.05
Ltb-201ENSMUST00000025262 Dcaf1Q80TR8 1506 aa40.12■■■■■ 4.01
Ltb-201ENSMUST00000025262 Thoc2B1AZI6 1594 aaKnown RBP39.51■■■■□ 3.92
Ltb-201ENSMUST00000025262 Pds5bQ4VA53 1446 aaKnown RBP39.37■■■■□ 3.89
Ltb-201ENSMUST00000025262 Rb1cc1Q9ESK9 1588 aa39.15■■■■□ 3.86
Ltb-201ENSMUST00000025262 Cc2d2aQ8CFW7 1633 aa38.81■■■■□ 3.8
Ltb-201ENSMUST00000025262 Atad2bE9Q166 1460 aaKnown RBP38.8■■■■□ 3.8
Ltb-201ENSMUST00000025262 Baz1aO88379 1555 aa38.49■■■■□ 3.75
Ltb-201ENSMUST00000025262 Ercc6F8VPZ5 1481 aa38.49■■■■□ 3.75
Ltb-201ENSMUST00000025262 Crybg2B7ZCC2 1516 aa38.44■■■■□ 3.74
Ltb-201ENSMUST00000025262 Fam135aQ6NS59 1506 aa38.38■■■■□ 3.74
Ltb-201ENSMUST00000025262 Smarca2Q6DIC0 1577 aa38.23■■■■□ 3.71
Ltb-201ENSMUST00000025262 Zcchc6Q5BLK4 1491 aaKnown RBP38.2■■■■□ 3.71
Ltb-201ENSMUST00000025262 Ccdc180J3QNE4 1664 aa38.11■■■■□ 3.69
Ltb-201ENSMUST00000025262 Dnajc5P60904 198 aa38.09■■■■□ 3.69
Ltb-201ENSMUST00000025262 Smarca4Q3TKT4 1613 aaKnown RBP38.03■■■■□ 3.68
Ltb-201ENSMUST00000025262 Iqgap2Q3UQ44 1575 aa38.01■■■■□ 3.67
Ltb-201ENSMUST00000025262 Wdr62Q3U3T8 1523 aa37.87■■■■□ 3.65
Ltb-201ENSMUST00000025262 Frmpd1A2AKB4 1549 aa37.86■■■■□ 3.65
Ltb-201ENSMUST00000025262 Phldb1Q6PDH0 1371 aaKnown RBP37.85■■■■□ 3.65
Ltb-201ENSMUST00000025262 Rhox8Q6VSS7 320 aa37.85■■■■□ 3.65
Ltb-201ENSMUST00000025262 Cecr2E9Q2Z1 1453 aa37.76■■■■□ 3.63
Ltb-201ENSMUST00000025262 Baz1bQ9Z277 1479 aa37.73■■■■□ 3.63
Ltb-201ENSMUST00000025262 Ubl4bQ9CQ84 188 aa37.57■■■■□ 3.6
Ltb-201ENSMUST00000025262 Trim41Q5NCC3 630 aa37.55■■■■□ 3.6
Ltb-201ENSMUST00000025262 Mrc2Q64449 1479 aa37.47■■■■□ 3.59
Ltb-201ENSMUST00000025262 Unc13aQ4KUS2 1712 aa37.17■■■■□ 3.54
Ltb-201ENSMUST00000025262 Lrriq1Q0P5X1 1673 aa36.7■■■■□ 3.47
Ltb-201ENSMUST00000025262 CftrP26361 1476 aa36.62■■■■□ 3.45
Ltb-201ENSMUST00000025262 Rsf1E9PWW9 1441 aaKnown RBP36.59■■■■□ 3.45
Ltb-201ENSMUST00000025262 Cttnbp2B9EJA2 1648 aa36.48■■■■□ 3.43
Ltb-201ENSMUST00000025262 Synj1Q8CHC4 1574 aa36.43■■■■□ 3.42
Ltb-201ENSMUST00000025262 Shroom2A2ALU4 1481 aa36.39■■■■□ 3.42
Ltb-201ENSMUST00000025262 Cux2P70298 1426 aa36.36■■■■□ 3.41
Ltb-201ENSMUST00000025262 Kif21aQ9QXL2 1672 aa36.28■■■■□ 3.4
Ltb-201ENSMUST00000025262 Eif4g3Q80XI3 1579 aaKnown RBP36.16■■■■□ 3.38
Ltb-201ENSMUST00000025262 Col17a1Q07563 1470 aa36.16■■■■□ 3.38
Ltb-201ENSMUST00000025262 Kif15Q6P9L6 1387 aa36.15■■■■□ 3.38
Ltb-201ENSMUST00000025262 Brd4Q9ESU6 1400 aaKnown RBP36.11■■■■□ 3.37
Ltb-201ENSMUST00000025262 Npm1Q61937 292 aaKnown RBP35.82■■■■□ 3.32
Ltb-201ENSMUST00000025262 Esf1Q3V1V3 845 aaKnown RBP35.81■■■■□ 3.32
Ltb-201ENSMUST00000025262 Pabpn1Q8CCS6 302 aaKnown RBP35.8■■■■□ 3.32
Ltb-201ENSMUST00000025262 Urb2E9Q7L1 1524 aaKnown RBP35.74■■■■□ 3.31
Ltb-201ENSMUST00000025262 Lamc3Q9R0B6 1581 aa35.73■■■■□ 3.31
Ltb-201ENSMUST00000025262 Top2bQ64511 1612 aa35.69■■■■□ 3.3
Ltb-201ENSMUST00000025262 Ccdc136Q3TVA9 1136 aa35.68■■■■□ 3.3
Ltb-201ENSMUST00000025262 Plb1Q3TTY0 1478 aa35.64■■■■□ 3.3
Ltb-201ENSMUST00000025262 Cep164Q5DU05 1446 aa35.63■■■■□ 3.29
Ltb-201ENSMUST00000025262 Dhx29Q6PGC1 1365 aaKnown RBP35.53■■■■□ 3.28
Ltb-201ENSMUST00000025262 Pelp1Q9DBD5 1123 aaKnown RBP35.5■■■■□ 3.27
Ltb-201ENSMUST00000025262 Rtl1Q7M732 1744 aa35.44■■■■□ 3.26
Ltb-201ENSMUST00000025262 Zcchc11B2RX14 1644 aaKnown RBP35.36■■■■□ 3.25
Ltb-201ENSMUST00000025262 Rusc2Q80U22 1514 aa35.31■■■■□ 3.24
Ltb-201ENSMUST00000025262 Pcdh10E9PXQ7 1057 aa35.29■■■■□ 3.24
Ltb-201ENSMUST00000025262 Il27Q8K3I6 234 aa35.27■■■■□ 3.24
Ltb-201ENSMUST00000025262 LrpprcQ6PB66 1392 aaKnown RBP35.25■■■■□ 3.23
Ltb-201ENSMUST00000025262 Crocc2F6XLV1 1638 aa35.24■■■■□ 3.23
Ltb-201ENSMUST00000025262 Ift140E9PY46 1464 aa35.16■■■■□ 3.22
Ltb-201ENSMUST00000025262 Ccdc18Q640L5 1455 aa35.16■■■■□ 3.22
Ltb-201ENSMUST00000025262 TnnQ80Z71 1560 aa35.01■■■■□ 3.2
Ltb-201ENSMUST00000025262 Camsap1A2AHC3 1581 aa34.99■■■■□ 3.19
Ltb-201ENSMUST00000025262 PogzQ8BZH4 1409 aaKnown RBP34.97■■■■□ 3.19
Ltb-201ENSMUST00000025262 Arhgef5E9Q7D5 1581 aa34.96■■■■□ 3.19
Ltb-201ENSMUST00000025262 Adgrl3Q80TS3 1537 aa34.92■■■■□ 3.18
Ltb-201ENSMUST00000025262 Disp1Q3TDN0 1521 aa34.84■■■■□ 3.17
Ltb-201ENSMUST00000025262 Ttbk1Q6PCN3 1308 aa34.8■■■■□ 3.16
Ltb-201ENSMUST00000025262 Duox2A2AQ99 1517 aa34.76■■■■□ 3.16
Ltb-201ENSMUST00000025262 PtprkP35822 1457 aa34.72■■■■□ 3.15
Ltb-201ENSMUST00000025262 Nup160Q9Z0W3 1402 aaKnown RBP34.69■■■■□ 3.14
Ltb-201ENSMUST00000025262 Gm156Q58A37 223 aa34.68■■■■□ 3.14
Ltb-201ENSMUST00000025262 Cep170Q6A065 1588 aa34.66■■■■□ 3.14
Ltb-201ENSMUST00000025262 Golga3P55937 1487 aa34.66■■■■□ 3.14
Ltb-201ENSMUST00000025262 PtprtQ99M80 1454 aa34.66■■■■□ 3.14
Ltb-201ENSMUST00000025262 Cc2d2bA0A286YDU8 1405 aa34.64■■■■□ 3.14
Ltb-201ENSMUST00000025262 Gapvd1Q6PAR5 1458 aa34.61■■■■□ 3.13
Ltb-201ENSMUST00000025262 Samd9lQ69Z37 1561 aa34.5■■■■□ 3.11
Ltb-201ENSMUST00000025262 Setd1bQ8CFT2 1985 aa34.49■■■■□ 3.11
Ltb-201ENSMUST00000025262 Fgd6Q69ZL1 1399 aa34.49■■■■□ 3.11
Ltb-201ENSMUST00000025262 Pbrm1Q8BSQ9 1634 aaKnown RBP34.45■■■■□ 3.11
Ltb-201ENSMUST00000025262 Grin2bQ01097 1482 aa34.43■■■■□ 3.1
Ltb-201ENSMUST00000025262 Cngb1E1AZ71 1325 aa34.4■■■■□ 3.1
Ltb-201ENSMUST00000025262 AqrQ8CFQ3 1481 aaKnown RBP34.36■■■■□ 3.09
Ltb-201ENSMUST00000025262 Pprc1Q6NZN1 1644 aa34.36■■■■□ 3.09
Ltb-201ENSMUST00000025262 Rad54l2Q99NG0 1466 aa34.33■■■■□ 3.09
Ltb-201ENSMUST00000025262 Fmn1Q05860 1466 aa34.3■■■■□ 3.08
Ltb-201ENSMUST00000025262 Grin2aP35436 1464 aa34.27■■■■□ 3.08
Ltb-201ENSMUST00000025262 Magi3Q9EQJ9 1476 aa34.25■■■■□ 3.07
Ltb-201ENSMUST00000025262 Abcc1O35379 1528 aa34.23■■■■□ 3.07
Ltb-201ENSMUST00000025262 Ythdc2B2RR83 1445 aaKnown RBP34.22■■■■□ 3.07
Ltb-201ENSMUST00000025262 Efcab5A0JP43 1406 aa34.21■■■■□ 3.07
Ltb-201ENSMUST00000025262 AknaQ80VW7 1404 aa34.21■■■■□ 3.07
Retrieved 100 of 22,080 RNA–protein pairs in 130.7 ms