RNA–Protein interactions for RNA: ENSMUST00000024851.9

Ndc80-201, Transcript of Kinetochore protein NDC80 homolog, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc80, Length 2,201 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc80-201ENSMUST00000024851 NischQ80TM9 1593 aa26.47■■□□□ 1.83
Ndc80-201ENSMUST00000024851 Gm35339A0A140LHH9 1649 aa26.16■■□□□ 1.78
Ndc80-201ENSMUST00000024851 Abcc9P70170 1546 aa25.71■■□□□ 1.71
Ndc80-201ENSMUST00000024851 Abcc8B2RUS7 1588 aa25.21■■□□□ 1.63
Ndc80-201ENSMUST00000024851 Rhox8Q6VSS7 320 aa24.22■■□□□ 1.47
Ndc80-201ENSMUST00000024851 Rtl1Q7M732 1744 aa23.76■■□□□ 1.39
Ndc80-201ENSMUST00000024851 ScribQ80U72 1612 aa23.63■■□□□ 1.37
Ndc80-201ENSMUST00000024851 Dcaf1Q80TR8 1506 aa23.48■■□□□ 1.35
Ndc80-201ENSMUST00000024851 Ccdc180J3QNE4 1664 aa23.28■■□□□ 1.32
Ndc80-201ENSMUST00000024851 Rb1cc1Q9ESK9 1588 aa23.17■■□□□ 1.3
Ndc80-201ENSMUST00000024851 Kdm5dQ62240 1548 aa23.12■■□□□ 1.29
Ndc80-201ENSMUST00000024851 Zcchc6Q5BLK4 1491 aaKnown RBP23.03■■□□□ 1.28
Ndc80-201ENSMUST00000024851 NacadQ5SWP3 1504 aa22.94■■□□□ 1.26
Ndc80-201ENSMUST00000024851 Baz1aO88379 1555 aa22.9■■□□□ 1.26
Ndc80-201ENSMUST00000024851 Crybg2B7ZCC2 1516 aa22.54■■□□□ 1.2
Ndc80-201ENSMUST00000024851 Ccdc136Q3TVA9 1136 aa22.53■■□□□ 1.2
Ndc80-201ENSMUST00000024851 Sycp2Q9CUU3 1500 aa22.46■■□□□ 1.19
Ndc80-201ENSMUST00000024851 Smarca2Q6DIC0 1577 aa22.38■■□□□ 1.17
Ndc80-201ENSMUST00000024851 HrcG5E8J6 738 aa22.22■■□□□ 1.15
Ndc80-201ENSMUST00000024851 Trim41Q5NCC3 630 aa22.06■■□□□ 1.12
Ndc80-201ENSMUST00000024851 BicraF8VPZ9 1578 aa22.02■■□□□ 1.12
Ndc80-201ENSMUST00000024851 Cecr2E9Q2Z1 1453 aa21.9■■□□□ 1.1
Ndc80-201ENSMUST00000024851 Brd4Q9ESU6 1400 aaKnown RBP21.79■■□□□ 1.08
Ndc80-201ENSMUST00000024851 Synj1Q8CHC4 1574 aa21.67■■□□□ 1.06
Ndc80-201ENSMUST00000024851 Cep164Q5DU05 1446 aa21.64■■□□□ 1.05
Ndc80-201ENSMUST00000024851 CftrP26361 1476 aa21.55■■□□□ 1.04
Ndc80-201ENSMUST00000024851 Cngb1E1AZ71 1325 aa21.53■■□□□ 1.04
Ndc80-201ENSMUST00000024851 Golga3P55937 1487 aa21.51■■□□□ 1.03
Ndc80-201ENSMUST00000024851 Rsf1E9PWW9 1441 aaKnown RBP21.48■■□□□ 1.03
Ndc80-201ENSMUST00000024851 Chic1Q8CBW7 227 aa21.45■■□□□ 1.02
Ndc80-201ENSMUST00000024851 Cttnbp2B9EJA2 1648 aa21.44■■□□□ 1.02
Ndc80-201ENSMUST00000024851 Smarca4Q3TKT4 1613 aaKnown RBP21.44■■□□□ 1.02
Ndc80-201ENSMUST00000024851 Ehmt2Q9Z148 1263 aaKnown RBP21.43■■□□□ 1.02
Ndc80-201ENSMUST00000024851 Rpgrip1Q9EPQ2 1331 aa21.42■■□□□ 1.02
Ndc80-201ENSMUST00000024851 Ccdc88bQ4QRL3 1481 aa21.38■■□□□ 1.01
Ndc80-201ENSMUST00000024851 Top2bQ64511 1612 aa21.34■■□□□ 1.01
Ndc80-201ENSMUST00000024851 Esf1Q3V1V3 845 aaKnown RBP21.33■■□□□ 1
Ndc80-201ENSMUST00000024851 Acin1Q9JIX8 1338 aaKnown RBP21.32■■□□□ 1
Ndc80-201ENSMUST00000024851 Iqgap2Q3UQ44 1575 aa21.18■□□□□ 0.98
Ndc80-201ENSMUST00000024851 Gab3Q8BSM5 595 aa21.17■□□□□ 0.98
Ndc80-201ENSMUST00000024851 Cc2d2aQ8CFW7 1633 aa21.13■□□□□ 0.97
Ndc80-201ENSMUST00000024851 Atad2bE9Q166 1460 aaKnown RBP21.1■□□□□ 0.97
Ndc80-201ENSMUST00000024851 Pds5bQ4VA53 1446 aaKnown RBP21.02■□□□□ 0.95
Ndc80-201ENSMUST00000024851 Fmn1Q05860 1466 aa20.98■□□□□ 0.95
Ndc80-201ENSMUST00000024851 Top2aQ01320 1528 aaKnown RBP20.88■□□□□ 0.93
Ndc80-201ENSMUST00000024851 Frmpd1A2AKB4 1549 aa20.8■□□□□ 0.92
Ndc80-201ENSMUST00000024851 Rapgef2Q8CHG7 1496 aa20.79■□□□□ 0.92
Ndc80-201ENSMUST00000024851 Wdr62Q3U3T8 1523 aa20.79■□□□□ 0.92
Ndc80-201ENSMUST00000024851 TnnQ80Z71 1560 aa20.73■□□□□ 0.91
Ndc80-201ENSMUST00000024851 Cep162Q6ZQ06 1403 aa20.62■□□□□ 0.89
Ndc80-201ENSMUST00000024851 Ercc6F8VPZ5 1481 aa20.62■□□□□ 0.89
Ndc80-201ENSMUST00000024851 Unc13aQ4KUS2 1712 aa20.61■□□□□ 0.89
Ndc80-201ENSMUST00000024851 Lamc3Q9R0B6 1581 aa20.59■□□□□ 0.89
Ndc80-201ENSMUST00000024851 Eif4g1Q6NZJ6 1600 aaKnown RBP20.52■□□□□ 0.88
Ndc80-201ENSMUST00000024851 Kif15Q6P9L6 1387 aa20.48■□□□□ 0.87
Ndc80-201ENSMUST00000024851 Npm2Q80W85 207 aa20.47■□□□□ 0.87
Ndc80-201ENSMUST00000024851 Myt1lP97500 1187 aa20.46■□□□□ 0.87
Ndc80-201ENSMUST00000024851 Mier1Q5UAK0 511 aa20.42■□□□□ 0.86
Ndc80-201ENSMUST00000024851 PtprkP35822 1457 aa20.41■□□□□ 0.86
Ndc80-201ENSMUST00000024851 Thoc2B1AZI6 1594 aaKnown RBP20.41■□□□□ 0.86
Ndc80-201ENSMUST00000024851 Camsap1A2AHC3 1581 aa20.39■□□□□ 0.86
Ndc80-201ENSMUST00000024851 NrkQ9R0G8 1455 aa20.36■□□□□ 0.85
Ndc80-201ENSMUST00000024851 Il27Q8K3I6 234 aa20.35■□□□□ 0.85
Ndc80-201ENSMUST00000024851 Arhgap35Q91YM2 1499 aa20.34■□□□□ 0.85
Ndc80-201ENSMUST00000024851 Phldb1Q6PDH0 1371 aaKnown RBP20.33■□□□□ 0.85
Ndc80-201ENSMUST00000024851 Shroom4Q1W617 1475 aa20.29■□□□□ 0.84
Ndc80-201ENSMUST00000024851 Ccdc18Q640L5 1455 aa20.26■□□□□ 0.83
Ndc80-201ENSMUST00000024851 UbtfP25976 765 aaKnown RBP20.26■□□□□ 0.83
Ndc80-201ENSMUST00000024851 Pcgf6Q99NA9 353 aa20.26■□□□□ 0.83
Ndc80-201ENSMUST00000024851 NefmP08553 848 aa20.25■□□□□ 0.83
Ndc80-201ENSMUST00000024851 Clip1Q922J3 1391 aa20.24■□□□□ 0.83
Ndc80-201ENSMUST00000024851 Grin2bQ01097 1482 aa20.24■□□□□ 0.83
Ndc80-201ENSMUST00000024851 Cux2P70298 1426 aa20.18■□□□□ 0.82
Ndc80-201ENSMUST00000024851 Ubl4bQ9CQ84 188 aa20.18■□□□□ 0.82
Ndc80-201ENSMUST00000024851 Fam135aQ6NS59 1506 aa20.17■□□□□ 0.82
Ndc80-201ENSMUST00000024851 Map3k1P53349 1493 aa20.16■□□□□ 0.82
Ndc80-201ENSMUST00000024851 Plekhg3Q4VAC9 1341 aa20.1■□□□□ 0.81
Ndc80-201ENSMUST00000024851 Mroh2bQ7M6Y6 1581 aa20.1■□□□□ 0.81
Ndc80-201ENSMUST00000024851 Eea1Q8BL66 1411 aa20.09■□□□□ 0.81
Ndc80-201ENSMUST00000024851 Arap1Q4LDD4 1452 aa20.09■□□□□ 0.81
Ndc80-201ENSMUST00000024851 Supt5hO55201 1082 aaKnown RBP20.07■□□□□ 0.8
Ndc80-201ENSMUST00000024851 Npm1Q61937 292 aaKnown RBP20.06■□□□□ 0.8
Ndc80-201ENSMUST00000024851 Baz1bQ9Z277 1479 aa20.04■□□□□ 0.8
Ndc80-201ENSMUST00000024851 Setd5Q5XJV7 1441 aa20.02■□□□□ 0.79
Ndc80-201ENSMUST00000024851 LrpprcQ6PB66 1392 aaKnown RBP20.02■□□□□ 0.79
Ndc80-201ENSMUST00000024851 Zeb1Q64318 1117 aa20.02■□□□□ 0.79
Ndc80-201ENSMUST00000024851 Arhgef5E9Q7D5 1581 aa20.01■□□□□ 0.79
Ndc80-201ENSMUST00000024851 Efcab5A0JP43 1406 aa20■□□□□ 0.79
Ndc80-201ENSMUST00000024851 PogzQ8BZH4 1409 aaKnown RBP19.98■□□□□ 0.79
Ndc80-201ENSMUST00000024851 AqrQ8CFQ3 1481 aaKnown RBP19.97■□□□□ 0.79
Ndc80-201ENSMUST00000024851 Duox2A2AQ99 1517 aa19.95■□□□□ 0.78
Ndc80-201ENSMUST00000024851 Ncapd3Q6ZQK0 1506 aa19.95■□□□□ 0.78
Ndc80-201ENSMUST00000024851 Ap3b1Q9Z1T1 1105 aa19.95■□□□□ 0.78
Ndc80-201ENSMUST00000024851 Ankrd26Q811D2 1581 aa19.94■□□□□ 0.78
Ndc80-201ENSMUST00000024851 Erich3F6QRE9 1637 aa19.94■□□□□ 0.78
Ndc80-201ENSMUST00000024851 Tiam1Q60610 1591 aa19.88■□□□□ 0.77
Ndc80-201ENSMUST00000024851 Carmil1Q6EDY6 1374 aa19.86■□□□□ 0.77
Ndc80-201ENSMUST00000024851 Dhx29Q6PGC1 1365 aaKnown RBP19.84■□□□□ 0.77
Ndc80-201ENSMUST00000024851 Samd9lQ69Z37 1561 aa19.84■□□□□ 0.77
Ndc80-201ENSMUST00000024851 Cux1P53564 1515 aa19.83■□□□□ 0.76
Retrieved 100 of 22,080 RNA–protein pairs in 53.7 ms