RNA–Protein interactions for RNA: ENSMUST00000023426.11

Cldnd1-201, Transcript of Claudin domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cldnd1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cldnd1-201ENSMUST00000023426 NischQ80TM9 1593 aa48.52■■■■■ 5.36
Cldnd1-201ENSMUST00000023426 Gm35339A0A140LHH9 1649 aa47.88■■■■■ 5.26
Cldnd1-201ENSMUST00000023426 Abcc9P70170 1546 aa47.16■■■■■ 5.14
Cldnd1-201ENSMUST00000023426 Abcc8B2RUS7 1588 aa46.14■■■■■ 4.98
Cldnd1-201ENSMUST00000023426 Rhox8Q6VSS7 320 aa44.63■■■■■ 4.73
Cldnd1-201ENSMUST00000023426 Rtl1Q7M732 1744 aa44.32■■■■■ 4.68
Cldnd1-201ENSMUST00000023426 Ccdc180J3QNE4 1664 aa43.42■■■■■ 4.54
Cldnd1-201ENSMUST00000023426 Dcaf1Q80TR8 1506 aa43.25■■■■■ 4.51
Cldnd1-201ENSMUST00000023426 ScribQ80U72 1612 aa42.94■■■■■ 4.47
Cldnd1-201ENSMUST00000023426 Zcchc6Q5BLK4 1491 aaKnown RBP42.59■■■■■ 4.41
Cldnd1-201ENSMUST00000023426 Rb1cc1Q9ESK9 1588 aa42.48■■■■■ 4.39
Cldnd1-201ENSMUST00000023426 Kdm5dQ62240 1548 aa42.18■■■■■ 4.34
Cldnd1-201ENSMUST00000023426 Baz1aO88379 1555 aa42.07■■■■■ 4.32
Cldnd1-201ENSMUST00000023426 NacadQ5SWP3 1504 aa41.98■■■■■ 4.31
Cldnd1-201ENSMUST00000023426 Crybg2B7ZCC2 1516 aa41.52■■■■■ 4.24
Cldnd1-201ENSMUST00000023426 HrcG5E8J6 738 aa41.45■■■■■ 4.23
Cldnd1-201ENSMUST00000023426 Ccdc136Q3TVA9 1136 aa41.36■■■■■ 4.21
Cldnd1-201ENSMUST00000023426 Smarca2Q6DIC0 1577 aa41.1■■■■■ 4.17
Cldnd1-201ENSMUST00000023426 Sycp2Q9CUU3 1500 aa41.03■■■■■ 4.16
Cldnd1-201ENSMUST00000023426 Trim41Q5NCC3 630 aa40.82■■■■■ 4.12
Cldnd1-201ENSMUST00000023426 Rpgrip1Q9EPQ2 1331 aa40.79■■■■■ 4.12
Cldnd1-201ENSMUST00000023426 Cep164Q5DU05 1446 aa40.17■■■■■ 4.02
Cldnd1-201ENSMUST00000023426 Brd4Q9ESU6 1400 aaKnown RBP40.17■■■■■ 4.02
Cldnd1-201ENSMUST00000023426 Acin1Q9JIX8 1338 aaKnown RBP40.11■■■■■ 4.01
Cldnd1-201ENSMUST00000023426 BicraF8VPZ9 1578 aa40.03■■■■■ 4
Cldnd1-201ENSMUST00000023426 Cecr2E9Q2Z1 1453 aa39.98■■■■□ 3.99
Cldnd1-201ENSMUST00000023426 Synj1Q8CHC4 1574 aa39.69■■■■□ 3.94
Cldnd1-201ENSMUST00000023426 Golga3P55937 1487 aa39.67■■■■□ 3.94
Cldnd1-201ENSMUST00000023426 Ehmt2Q9Z148 1263 aaKnown RBP39.64■■■■□ 3.94
Cldnd1-201ENSMUST00000023426 Cngb1E1AZ71 1325 aa39.6■■■■□ 3.93
Cldnd1-201ENSMUST00000023426 Rsf1E9PWW9 1441 aaKnown RBP39.57■■■■□ 3.93
Cldnd1-201ENSMUST00000023426 CftrP26361 1476 aa39.53■■■■□ 3.92
Cldnd1-201ENSMUST00000023426 Chic1Q8CBW7 227 aa39.43■■■■□ 3.9
Cldnd1-201ENSMUST00000023426 Cttnbp2B9EJA2 1648 aa39.35■■■■□ 3.89
Cldnd1-201ENSMUST00000023426 Ccdc88bQ4QRL3 1481 aa39.3■■■■□ 3.88
Cldnd1-201ENSMUST00000023426 Smarca4Q3TKT4 1613 aaKnown RBP39.23■■■■□ 3.87
Cldnd1-201ENSMUST00000023426 Top2bQ64511 1612 aa39.22■■■■□ 3.87
Cldnd1-201ENSMUST00000023426 Esf1Q3V1V3 845 aaKnown RBP39.16■■■■□ 3.86
Cldnd1-201ENSMUST00000023426 Gab3Q8BSM5 595 aa38.98■■■■□ 3.83
Cldnd1-201ENSMUST00000023426 Cc2d2aQ8CFW7 1633 aa38.68■■■■□ 3.78
Cldnd1-201ENSMUST00000023426 Fmn1Q05860 1466 aa38.68■■■■□ 3.78
Cldnd1-201ENSMUST00000023426 Iqgap2Q3UQ44 1575 aa38.67■■■■□ 3.78
Cldnd1-201ENSMUST00000023426 Atad2bE9Q166 1460 aaKnown RBP38.57■■■■□ 3.77
Cldnd1-201ENSMUST00000023426 Top2aQ01320 1528 aaKnown RBP38.45■■■■□ 3.75
Cldnd1-201ENSMUST00000023426 Rapgef2Q8CHG7 1496 aa38.42■■■■□ 3.74
Cldnd1-201ENSMUST00000023426 Pds5bQ4VA53 1446 aaKnown RBP38.41■■■■□ 3.74
Cldnd1-201ENSMUST00000023426 Pcgf6Q99NA9 353 aa38.17■■■■□ 3.7
Cldnd1-201ENSMUST00000023426 Cep162Q6ZQ06 1403 aa38.07■■■■□ 3.68
Cldnd1-201ENSMUST00000023426 NefmP08553 848 aa38.06■■■■□ 3.68
Cldnd1-201ENSMUST00000023426 TnnQ80Z71 1560 aa38.05■■■■□ 3.68
Cldnd1-201ENSMUST00000023426 Mier1Q5UAK0 511 aa37.99■■■■□ 3.67
Cldnd1-201ENSMUST00000023426 Wdr62Q3U3T8 1523 aa37.92■■■■□ 3.66
Cldnd1-201ENSMUST00000023426 Frmpd1A2AKB4 1549 aa37.91■■■■□ 3.66
Cldnd1-201ENSMUST00000023426 Eif4g1Q6NZJ6 1600 aaKnown RBP37.78■■■■□ 3.64
Cldnd1-201ENSMUST00000023426 Lamc3Q9R0B6 1581 aa37.74■■■■□ 3.63
Cldnd1-201ENSMUST00000023426 Npm2Q80W85 207 aa37.73■■■■□ 3.63
Cldnd1-201ENSMUST00000023426 Ercc6F8VPZ5 1481 aa37.66■■■■□ 3.62
Cldnd1-201ENSMUST00000023426 Myt1lP97500 1187 aa37.65■■■■□ 3.62
Cldnd1-201ENSMUST00000023426 Supt5hO55201 1082 aaKnown RBP37.6■■■■□ 3.61
Cldnd1-201ENSMUST00000023426 UbtfP25976 765 aaKnown RBP37.52■■■■□ 3.6
Cldnd1-201ENSMUST00000023426 NrkQ9R0G8 1455 aa37.51■■■■□ 3.6
Cldnd1-201ENSMUST00000023426 Kif15Q6P9L6 1387 aa37.47■■■■□ 3.59
Cldnd1-201ENSMUST00000023426 Clip1Q922J3 1391 aa37.45■■■■□ 3.59
Cldnd1-201ENSMUST00000023426 Arhgap35Q91YM2 1499 aa37.44■■■■□ 3.58
Cldnd1-201ENSMUST00000023426 Unc13aQ4KUS2 1712 aa37.42■■■■□ 3.58
Cldnd1-201ENSMUST00000023426 PtprkP35822 1457 aa37.36■■■■□ 3.57
Cldnd1-201ENSMUST00000023426 Camsap1A2AHC3 1581 aa37.36■■■■□ 3.57
Cldnd1-201ENSMUST00000023426 Zeb1Q64318 1117 aa37.35■■■■□ 3.57
Cldnd1-201ENSMUST00000023426 Shroom4Q1W617 1475 aa37.32■■■■□ 3.57
Cldnd1-201ENSMUST00000023426 Map3k1P53349 1493 aa37.24■■■■□ 3.55
Cldnd1-201ENSMUST00000023426 Ccdc18Q640L5 1455 aa37.22■■■■□ 3.55
Cldnd1-201ENSMUST00000023426 Eea1Q8BL66 1411 aa37.17■■■■□ 3.54
Cldnd1-201ENSMUST00000023426 Il27Q8K3I6 234 aa37.16■■■■□ 3.54
Cldnd1-201ENSMUST00000023426 Phldb1Q6PDH0 1371 aaKnown RBP37.14■■■■□ 3.54
Cldnd1-201ENSMUST00000023426 Grin2bQ01097 1482 aa37.13■■■■□ 3.54
Cldnd1-201ENSMUST00000023426 Plekhg3Q4VAC9 1341 aa37.04■■■■□ 3.52
Cldnd1-201ENSMUST00000023426 Thoc2B1AZI6 1594 aaKnown RBP37.03■■■■□ 3.52
Cldnd1-201ENSMUST00000023426 Arap1Q4LDD4 1452 aa37.01■■■■□ 3.51
Cldnd1-201ENSMUST00000023426 Ncapd3Q6ZQK0 1506 aa36.99■■■■□ 3.51
Cldnd1-201ENSMUST00000023426 Mroh2bQ7M6Y6 1581 aa36.97■■■■□ 3.51
Cldnd1-201ENSMUST00000023426 Las1lA2BE28 776 aaKnown RBP36.95■■■■□ 3.51
Cldnd1-201ENSMUST00000023426 Arhgef5E9Q7D5 1581 aa36.95■■■■□ 3.51
Cldnd1-201ENSMUST00000023426 Setd5Q5XJV7 1441 aa36.93■■■■□ 3.5
Cldnd1-201ENSMUST00000023426 AqrQ8CFQ3 1481 aaKnown RBP36.87■■■■□ 3.49
Cldnd1-201ENSMUST00000023426 Cux2P70298 1426 aa36.86■■■■□ 3.49
Cldnd1-201ENSMUST00000023426 Sall2Q9QX96 1004 aa36.85■■■■□ 3.49
Cldnd1-201ENSMUST00000023426 Baz1bQ9Z277 1479 aa36.79■■■■□ 3.48
Cldnd1-201ENSMUST00000023426 Efcab5A0JP43 1406 aa36.78■■■■□ 3.48
Cldnd1-201ENSMUST00000023426 Ubl4bQ9CQ84 188 aa36.77■■■■□ 3.48
Cldnd1-201ENSMUST00000023426 Erich3F6QRE9 1637 aa36.76■■■■□ 3.47
Cldnd1-201ENSMUST00000023426 Fam135aQ6NS59 1506 aa36.74■■■■□ 3.47
Cldnd1-201ENSMUST00000023426 Npm1Q61937 292 aaKnown RBP36.73■■■■□ 3.47
Cldnd1-201ENSMUST00000023426 Tiam1Q60610 1591 aa36.72■■■■□ 3.47
Cldnd1-201ENSMUST00000023426 Ankrd26Q811D2 1581 aa36.67■■■■□ 3.46
Cldnd1-201ENSMUST00000023426 LrpprcQ6PB66 1392 aaKnown RBP36.66■■■■□ 3.46
Cldnd1-201ENSMUST00000023426 TonslQ6NZL6 1363 aa36.65■■■■□ 3.46
Cldnd1-201ENSMUST00000023426 PogzQ8BZH4 1409 aaKnown RBP36.61■■■■□ 3.45
Cldnd1-201ENSMUST00000023426 Ap3b1Q9Z1T1 1105 aa36.61■■■■□ 3.45
Cldnd1-201ENSMUST00000023426 Carmil1Q6EDY6 1374 aa36.6■■■■□ 3.45
Cldnd1-201ENSMUST00000023426 Naip1Q9QWK5 1403 aa36.58■■■■□ 3.45
Retrieved 100 of 22,080 RNA–protein pairs in 34.5 ms