RNA–Protein interactions for RNA: ENSMUST00000022314.9

Sftpa1-201, Transcript of Pulmonary surfactant-associated protein A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sftpa1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1-201ENSMUST00000022314 Gm35339A0A140LHH9 1649 aa31.34■■■□□ 2.61
Sftpa1-201ENSMUST00000022314 NischQ80TM9 1593 aa30.96■■■□□ 2.55
Sftpa1-201ENSMUST00000022314 Abcc8B2RUS7 1588 aa29.95■■■□□ 2.39
Sftpa1-201ENSMUST00000022314 Abcc9P70170 1546 aa29.94■■■□□ 2.38
Sftpa1-201ENSMUST00000022314 ScribQ80U72 1612 aa28.91■■■□□ 2.22
Sftpa1-201ENSMUST00000022314 NacadQ5SWP3 1504 aa27.97■■■□□ 2.07
Sftpa1-201ENSMUST00000022314 Kdm5dQ62240 1548 aa27.93■■■□□ 2.06
Sftpa1-201ENSMUST00000022314 Dcaf1Q80TR8 1506 aa27.5■■□□□ 1.99
Sftpa1-201ENSMUST00000022314 Sycp2Q9CUU3 1500 aa27.44■■□□□ 1.98
Sftpa1-201ENSMUST00000022314 BicraF8VPZ9 1578 aa27.09■■□□□ 1.93
Sftpa1-201ENSMUST00000022314 Rb1cc1Q9ESK9 1588 aa26.97■■□□□ 1.91
Sftpa1-201ENSMUST00000022314 Rhox8Q6VSS7 320 aa26.75■■□□□ 1.87
Sftpa1-201ENSMUST00000022314 Baz1aO88379 1555 aa26.58■■□□□ 1.85
Sftpa1-201ENSMUST00000022314 Ccdc180J3QNE4 1664 aa26.48■■□□□ 1.83
Sftpa1-201ENSMUST00000022314 Dnajc5bQ9CQ94 199 aa26.48■■□□□ 1.83
Sftpa1-201ENSMUST00000022314 Crybg2B7ZCC2 1516 aa26.48■■□□□ 1.83
Sftpa1-201ENSMUST00000022314 Pds5bQ4VA53 1446 aaKnown RBP26.3■■□□□ 1.8
Sftpa1-201ENSMUST00000022314 Zcchc6Q5BLK4 1491 aaKnown RBP26.23■■□□□ 1.79
Sftpa1-201ENSMUST00000022314 Thoc2B1AZI6 1594 aaKnown RBP26.08■■□□□ 1.77
Sftpa1-201ENSMUST00000022314 Atad2bE9Q166 1460 aaKnown RBP26.05■■□□□ 1.76
Sftpa1-201ENSMUST00000022314 Cecr2E9Q2Z1 1453 aa25.81■■□□□ 1.72
Sftpa1-201ENSMUST00000022314 Smarca4Q3TKT4 1613 aaKnown RBP25.81■■□□□ 1.72
Sftpa1-201ENSMUST00000022314 Smarca2Q6DIC0 1577 aa25.8■■□□□ 1.72
Sftpa1-201ENSMUST00000022314 Ercc6F8VPZ5 1481 aa25.72■■□□□ 1.71
Sftpa1-201ENSMUST00000022314 Iqgap2Q3UQ44 1575 aa25.69■■□□□ 1.7
Sftpa1-201ENSMUST00000022314 Cc2d2aQ8CFW7 1633 aa25.68■■□□□ 1.7
Sftpa1-201ENSMUST00000022314 Fam135aQ6NS59 1506 aa25.48■■□□□ 1.67
Sftpa1-201ENSMUST00000022314 Wdr62Q3U3T8 1523 aa25.47■■□□□ 1.67
Sftpa1-201ENSMUST00000022314 Frmpd1A2AKB4 1549 aa25.47■■□□□ 1.67
Sftpa1-201ENSMUST00000022314 Phldb1Q6PDH0 1371 aaKnown RBP25.31■■□□□ 1.64
Sftpa1-201ENSMUST00000022314 Rtl1Q7M732 1744 aa25.26■■□□□ 1.63
Sftpa1-201ENSMUST00000022314 CftrP26361 1476 aa25.17■■□□□ 1.62
Sftpa1-201ENSMUST00000022314 Ubl4bQ9CQ84 188 aa25.13■■□□□ 1.61
Sftpa1-201ENSMUST00000022314 Synj1Q8CHC4 1574 aa25.13■■□□□ 1.61
Sftpa1-201ENSMUST00000022314 Baz1bQ9Z277 1479 aa25.1■■□□□ 1.61
Sftpa1-201ENSMUST00000022314 Cttnbp2B9EJA2 1648 aa25.09■■□□□ 1.61
Sftpa1-201ENSMUST00000022314 Ccdc136Q3TVA9 1136 aa25.09■■□□□ 1.61
Sftpa1-201ENSMUST00000022314 Unc13aQ4KUS2 1712 aa25.08■■□□□ 1.61
Sftpa1-201ENSMUST00000022314 Brd4Q9ESU6 1400 aaKnown RBP25.06■■□□□ 1.6
Sftpa1-201ENSMUST00000022314 Mrc2Q64449 1479 aa24.89■■□□□ 1.58
Sftpa1-201ENSMUST00000022314 Esf1Q3V1V3 845 aaKnown RBP24.73■■□□□ 1.55
Sftpa1-201ENSMUST00000022314 Trim41Q5NCC3 630 aa24.64■■□□□ 1.54
Sftpa1-201ENSMUST00000022314 Rsf1E9PWW9 1441 aaKnown RBP24.56■■□□□ 1.52
Sftpa1-201ENSMUST00000022314 Kif15Q6P9L6 1387 aa24.54■■□□□ 1.52
Sftpa1-201ENSMUST00000022314 Cux2P70298 1426 aa24.54■■□□□ 1.52
Sftpa1-201ENSMUST00000022314 Lamc3Q9R0B6 1581 aa24.42■■□□□ 1.5
Sftpa1-201ENSMUST00000022314 Lrriq1Q0P5X1 1673 aa24.35■■□□□ 1.49
Sftpa1-201ENSMUST00000022314 Kif21aQ9QXL2 1672 aa24.33■■□□□ 1.49
Sftpa1-201ENSMUST00000022314 Npm1Q61937 292 aaKnown RBP24.28■■□□□ 1.48
Sftpa1-201ENSMUST00000022314 Golga3P55937 1487 aa24.19■■□□□ 1.46
Sftpa1-201ENSMUST00000022314 Cep164Q5DU05 1446 aa24.17■■□□□ 1.46
Sftpa1-201ENSMUST00000022314 Top2bQ64511 1612 aa24.16■■□□□ 1.46
Sftpa1-201ENSMUST00000022314 TnnQ80Z71 1560 aa24.14■■□□□ 1.45
Sftpa1-201ENSMUST00000022314 Cngb1E1AZ71 1325 aa24.12■■□□□ 1.45
Sftpa1-201ENSMUST00000022314 Il27Q8K3I6 234 aa24.08■■□□□ 1.45
Sftpa1-201ENSMUST00000022314 Ccdc18Q640L5 1455 aa24.04■■□□□ 1.44
Sftpa1-201ENSMUST00000022314 Dhx29Q6PGC1 1365 aaKnown RBP24.02■■□□□ 1.44
Sftpa1-201ENSMUST00000022314 Urb2E9Q7L1 1524 aaKnown RBP23.99■■□□□ 1.43
Sftpa1-201ENSMUST00000022314 Eif4g3Q80XI3 1579 aaKnown RBP23.99■■□□□ 1.43
Sftpa1-201ENSMUST00000022314 Camsap1A2AHC3 1581 aa23.98■■□□□ 1.43
Sftpa1-201ENSMUST00000022314 LrpprcQ6PB66 1392 aaKnown RBP23.97■■□□□ 1.43
Sftpa1-201ENSMUST00000022314 Plb1Q3TTY0 1478 aa23.96■■□□□ 1.43
Sftpa1-201ENSMUST00000022314 Dnajc5P60904 198 aa23.92■■□□□ 1.42
Sftpa1-201ENSMUST00000022314 Fmn1Q05860 1466 aa23.91■■□□□ 1.42
Sftpa1-201ENSMUST00000022314 Crocc2F6XLV1 1638 aa23.86■■□□□ 1.41
Sftpa1-201ENSMUST00000022314 PogzQ8BZH4 1409 aaKnown RBP23.82■■□□□ 1.4
Sftpa1-201ENSMUST00000022314 Shroom2A2ALU4 1481 aa23.72■■□□□ 1.39
Sftpa1-201ENSMUST00000022314 Duox2A2AQ99 1517 aa23.71■■□□□ 1.39
Sftpa1-201ENSMUST00000022314 Ift140E9PY46 1464 aa23.69■■□□□ 1.38
Sftpa1-201ENSMUST00000022314 Grin2bQ01097 1482 aa23.67■■□□□ 1.38
Sftpa1-201ENSMUST00000022314 Rusc2Q80U22 1514 aa23.61■■□□□ 1.37
Sftpa1-201ENSMUST00000022314 Ccdc88bQ4QRL3 1481 aa23.59■■□□□ 1.37
Sftpa1-201ENSMUST00000022314 Disp1Q3TDN0 1521 aa23.58■■□□□ 1.36
Sftpa1-201ENSMUST00000022314 Pabpn1Q8CCS6 302 aaKnown RBP23.52■■□□□ 1.36
Sftpa1-201ENSMUST00000022314 Samd9lQ69Z37 1561 aa23.52■■□□□ 1.36
Sftpa1-201ENSMUST00000022314 Efcab5A0JP43 1406 aa23.51■■□□□ 1.35
Sftpa1-201ENSMUST00000022314 Chic1Q8CBW7 227 aa23.46■■□□□ 1.35
Sftpa1-201ENSMUST00000022314 Top2aQ01320 1528 aaKnown RBP23.45■■□□□ 1.34
Sftpa1-201ENSMUST00000022314 Nup160Q9Z0W3 1402 aaKnown RBP23.44■■□□□ 1.34
Sftpa1-201ENSMUST00000022314 Col17a1Q07563 1470 aa23.43■■□□□ 1.34
Sftpa1-201ENSMUST00000022314 Rad54l2Q99NG0 1466 aa23.41■■□□□ 1.34
Sftpa1-201ENSMUST00000022314 Setd1bQ8CFT2 1985 aa23.4■■□□□ 1.34
Sftpa1-201ENSMUST00000022314 Cc2d2bA0A286YDU8 1405 aa23.39■■□□□ 1.33
Sftpa1-201ENSMUST00000022314 NrkQ9R0G8 1455 aa23.38■■□□□ 1.33
Sftpa1-201ENSMUST00000022314 Pbrm1Q8BSQ9 1634 aaKnown RBP23.38■■□□□ 1.33
Sftpa1-201ENSMUST00000022314 Pelp1Q9DBD5 1123 aaKnown RBP23.38■■□□□ 1.33
Sftpa1-201ENSMUST00000022314 PtprkP35822 1457 aa23.33■■□□□ 1.33
Sftpa1-201ENSMUST00000022314 Magi3Q9EQJ9 1476 aa23.31■■□□□ 1.32
Sftpa1-201ENSMUST00000022314 Grin2aP35436 1464 aa23.3■■□□□ 1.32
Sftpa1-201ENSMUST00000022314 Shroom4Q1W617 1475 aa23.28■■□□□ 1.32
Sftpa1-201ENSMUST00000022314 AqrQ8CFQ3 1481 aaKnown RBP23.24■■□□□ 1.31
Sftpa1-201ENSMUST00000022314 Pla2r1Q62028 1487 aa23.17■■□□□ 1.3
Sftpa1-201ENSMUST00000022314 Fgd6Q69ZL1 1399 aa23.16■■□□□ 1.3
Sftpa1-201ENSMUST00000022314 SynmQ70IV5 1561 aa23.16■■□□□ 1.3
Sftpa1-201ENSMUST00000022314 Zcchc11B2RX14 1644 aaKnown RBP23.14■■□□□ 1.29
Sftpa1-201ENSMUST00000022314 Gpatch8A2A6A1 1505 aa23.1■■□□□ 1.29
Sftpa1-201ENSMUST00000022314 Zeb1Q64318 1117 aa23.08■■□□□ 1.29
Sftpa1-201ENSMUST00000022314 AknaQ80VW7 1404 aa23■■□□□ 1.27
Sftpa1-201ENSMUST00000022314 Gapvd1Q6PAR5 1458 aa22.98■■□□□ 1.27
Sftpa1-201ENSMUST00000022314 Npm2Q80W85 207 aa22.98■■□□□ 1.27
Retrieved 100 of 22,080 RNA–protein pairs in 214.2 ms