RNA–Protein interactions for RNA: ENSMUST00000020827.6

Rnft1-201, Transcript of E3 ubiquitin-protein ligase RNFT1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnft1, Length 4,452 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnft1-201ENSMUST00000020827 NischQ80TM9 1593 aa19.57■□□□□ 0.72
Rnft1-201ENSMUST00000020827 Gm35339A0A140LHH9 1649 aa18.98■□□□□ 0.63
Rnft1-201ENSMUST00000020827 Abcc9P70170 1546 aa18.92■□□□□ 0.62
Rnft1-201ENSMUST00000020827 Abcc8B2RUS7 1588 aa18.6■□□□□ 0.57
Rnft1-201ENSMUST00000020827 Rhox8Q6VSS7 320 aa18.4■□□□□ 0.54
Rnft1-201ENSMUST00000020827 ScribQ80U72 1612 aa17.61■□□□□ 0.41
Rnft1-201ENSMUST00000020827 Zcchc6Q5BLK4 1491 aaKnown RBP17.35■□□□□ 0.37
Rnft1-201ENSMUST00000020827 Ccdc136Q3TVA9 1136 aa17.32■□□□□ 0.36
Rnft1-201ENSMUST00000020827 Ehmt2Q9Z148 1263 aaKnown RBP17.19■□□□□ 0.34
Rnft1-201ENSMUST00000020827 Rtl1Q7M732 1744 aa17.17■□□□□ 0.34
Rnft1-201ENSMUST00000020827 Rb1cc1Q9ESK9 1588 aa17.15■□□□□ 0.34
Rnft1-201ENSMUST00000020827 Kdm5dQ62240 1548 aa17.13■□□□□ 0.33
Rnft1-201ENSMUST00000020827 Ccdc180J3QNE4 1664 aa17.08■□□□□ 0.32
Rnft1-201ENSMUST00000020827 Dcaf1Q80TR8 1506 aa16.88■□□□□ 0.29
Rnft1-201ENSMUST00000020827 Baz1aO88379 1555 aa16.8■□□□□ 0.28
Rnft1-201ENSMUST00000020827 NacadQ5SWP3 1504 aa16.68■□□□□ 0.26
Rnft1-201ENSMUST00000020827 Trim41Q5NCC3 630 aa16.57■□□□□ 0.24
Rnft1-201ENSMUST00000020827 Cecr2E9Q2Z1 1453 aa16.55■□□□□ 0.24
Rnft1-201ENSMUST00000020827 Chic1Q8CBW7 227 aa16.51■□□□□ 0.23
Rnft1-201ENSMUST00000020827 Smarca2Q6DIC0 1577 aa16.51■□□□□ 0.23
Rnft1-201ENSMUST00000020827 Sycp2Q9CUU3 1500 aa16.45■□□□□ 0.22
Rnft1-201ENSMUST00000020827 HrcG5E8J6 738 aa16.39■□□□□ 0.21
Rnft1-201ENSMUST00000020827 BicraF8VPZ9 1578 aa16.38■□□□□ 0.21
Rnft1-201ENSMUST00000020827 Gab3Q8BSM5 595 aa16.37■□□□□ 0.21
Rnft1-201ENSMUST00000020827 Cngb1E1AZ71 1325 aa16.33■□□□□ 0.21
Rnft1-201ENSMUST00000020827 Rsf1E9PWW9 1441 aaKnown RBP16.32■□□□□ 0.2
Rnft1-201ENSMUST00000020827 Ccdc88bQ4QRL3 1481 aa16.28■□□□□ 0.2
Rnft1-201ENSMUST00000020827 Acin1Q9JIX8 1338 aaKnown RBP16.24■□□□□ 0.19
Rnft1-201ENSMUST00000020827 Synj1Q8CHC4 1574 aa16.2■□□□□ 0.18
Rnft1-201ENSMUST00000020827 Crybg2B7ZCC2 1516 aa16.15■□□□□ 0.18
Rnft1-201ENSMUST00000020827 Cep164Q5DU05 1446 aa16.07■□□□□ 0.16
Rnft1-201ENSMUST00000020827 CftrP26361 1476 aa15.96■□□□□ 0.15
Rnft1-201ENSMUST00000020827 Esf1Q3V1V3 845 aaKnown RBP15.96■□□□□ 0.14
Rnft1-201ENSMUST00000020827 Golga3P55937 1487 aa15.9■□□□□ 0.14
Rnft1-201ENSMUST00000020827 Brd4Q9ESU6 1400 aaKnown RBP15.9■□□□□ 0.14
Rnft1-201ENSMUST00000020827 Cc2d2aQ8CFW7 1633 aa15.9■□□□□ 0.14
Rnft1-201ENSMUST00000020827 Pcgf6Q99NA9 353 aa15.84■□□□□ 0.13
Rnft1-201ENSMUST00000020827 Supt5hO55201 1082 aaKnown RBP15.82■□□□□ 0.12
Rnft1-201ENSMUST00000020827 Top2bQ64511 1612 aa15.78■□□□□ 0.12
Rnft1-201ENSMUST00000020827 Rpgrip1Q9EPQ2 1331 aa15.74■□□□□ 0.11
Rnft1-201ENSMUST00000020827 Mier1Q5UAK0 511 aa15.71■□□□□ 0.11
Rnft1-201ENSMUST00000020827 Smarca4Q3TKT4 1613 aaKnown RBP15.68■□□□□ 0.1
Rnft1-201ENSMUST00000020827 Cttnbp2B9EJA2 1648 aa15.68■□□□□ 0.1
Rnft1-201ENSMUST00000020827 Zeb1Q64318 1117 aa15.66■□□□□ 0.1
Rnft1-201ENSMUST00000020827 Myt1lP97500 1187 aa15.66■□□□□ 0.1
Rnft1-201ENSMUST00000020827 Ppargc1bQ8VHJ7 1014 aa15.65■□□□□ 0.1
Rnft1-201ENSMUST00000020827 UbtfP25976 765 aaKnown RBP15.6■□□□□ 0.09
Rnft1-201ENSMUST00000020827 Rapgef2Q8CHG7 1496 aa15.59■□□□□ 0.09
Rnft1-201ENSMUST00000020827 Iqgap2Q3UQ44 1575 aa15.58■□□□□ 0.08
Rnft1-201ENSMUST00000020827 Il27Q8K3I6 234 aa15.51■□□□□ 0.07
Rnft1-201ENSMUST00000020827 PtprkP35822 1457 aa15.5■□□□□ 0.07
Rnft1-201ENSMUST00000020827 Plekhg3Q4VAC9 1341 aa15.49■□□□□ 0.07
Rnft1-201ENSMUST00000020827 Top2aQ01320 1528 aaKnown RBP15.45■□□□□ 0.06
Rnft1-201ENSMUST00000020827 Aebp2Q9Z248 504 aaKnown RBP15.43■□□□□ 0.06
Rnft1-201ENSMUST00000020827 Sall2Q9QX96 1004 aa15.42■□□□□ 0.06
Rnft1-201ENSMUST00000020827 Ap3b1Q9Z1T1 1105 aa15.41■□□□□ 0.06
Rnft1-201ENSMUST00000020827 Cep162Q6ZQ06 1403 aa15.41■□□□□ 0.06
Rnft1-201ENSMUST00000020827 Frmpd1A2AKB4 1549 aa15.39■□□□□ 0.05
Rnft1-201ENSMUST00000020827 Fmn1Q05860 1466 aa15.38■□□□□ 0.05
Rnft1-201ENSMUST00000020827 Npm2Q80W85 207 aa15.35■□□□□ 0.05
Rnft1-201ENSMUST00000020827 Unc13aQ4KUS2 1712 aa15.35■□□□□ 0.05
Rnft1-201ENSMUST00000020827 Atad2bE9Q166 1460 aaKnown RBP15.32■□□□□ 0.04
Rnft1-201ENSMUST00000020827 Neurod1Q60867 357 aa15.31■□□□□ 0.04
Rnft1-201ENSMUST00000020827 Eif4g1Q6NZJ6 1600 aaKnown RBP15.27■□□□□ 0.03
Rnft1-201ENSMUST00000020827 Wdr62Q3U3T8 1523 aa15.23■□□□□ 0.03
Rnft1-201ENSMUST00000020827 Eid3Q3V124 375 aa15.22■□□□□ 0.03
Rnft1-201ENSMUST00000020827 Arhgap35Q91YM2 1499 aa15.22■□□□□ 0.03
Rnft1-201ENSMUST00000020827 TnnQ80Z71 1560 aa15.2■□□□□ 0.02
Rnft1-201ENSMUST00000020827 Kif15Q6P9L6 1387 aa15.19■□□□□ 0.02
Rnft1-201ENSMUST00000020827 Dnajc5bQ9CQ94 199 aa15.19■□□□□ 0.02
Rnft1-201ENSMUST00000020827 AqrQ8CFQ3 1481 aaKnown RBP15.19■□□□□ 0.02
Rnft1-201ENSMUST00000020827 Clip1Q922J3 1391 aa15.18■□□□□ 0.02
Rnft1-201ENSMUST00000020827 Arap1Q4LDD4 1452 aa15.17■□□□□ 0.02
Rnft1-201ENSMUST00000020827 Pds5bQ4VA53 1446 aaKnown RBP15.14■□□□□ 0.01
Rnft1-201ENSMUST00000020827 Mapk8ip2Q9ERE9 830 aa15.07■□□□□ 0
Rnft1-201ENSMUST00000020827 Camsap1A2AHC3 1581 aa15.06■□□□□ 0
Rnft1-201ENSMUST00000020827 Lamc3Q9R0B6 1581 aa15.05■□□□□ 0
Rnft1-201ENSMUST00000020827 Lmod2Q3UHZ5 550 aa15.05■□□□□ -0
Rnft1-201ENSMUST00000020827 Wdr66E9Q743 1299 aa15.04■□□□□ -0
Rnft1-201ENSMUST00000020827 Ncapd3Q6ZQK0 1506 aa15.02■□□□□ -0
Rnft1-201ENSMUST00000020827 NefmP08553 848 aa15□□□□□ -0.01
Rnft1-201ENSMUST00000020827 NrkQ9R0G8 1455 aa14.99□□□□□ -0.01
Rnft1-201ENSMUST00000020827 Shroom4Q1W617 1475 aa14.96□□□□□ -0.01
Rnft1-201ENSMUST00000020827 Setd5Q5XJV7 1441 aa14.96□□□□□ -0.02
Rnft1-201ENSMUST00000020827 Ubl4bQ9CQ84 188 aa14.95□□□□□ -0.02
Rnft1-201ENSMUST00000020827 Grin2bQ01097 1482 aa14.95□□□□□ -0.02
Rnft1-201ENSMUST00000020827 Baz1bQ9Z277 1479 aa14.94□□□□□ -0.02
Rnft1-201ENSMUST00000020827 Cux2P70298 1426 aa14.94□□□□□ -0.02
Rnft1-201ENSMUST00000020827 Kdm5bQ80Y84 1544 aa14.93□□□□□ -0.02
Rnft1-201ENSMUST00000020827 Slx4Q6P1D7 1565 aa14.93□□□□□ -0.02
Rnft1-201ENSMUST00000020827 Cux1P53564 1515 aa14.92□□□□□ -0.02
Rnft1-201ENSMUST00000020827 Gm38655A0A286YDK6 273 aa14.91□□□□□ -0.02
Rnft1-201ENSMUST00000020827 Arhgef5E9Q7D5 1581 aa14.9□□□□□ -0.02
Rnft1-201ENSMUST00000020827 Ercc6F8VPZ5 1481 aa14.9□□□□□ -0.02
Rnft1-201ENSMUST00000020827 Ankrd26Q811D2 1581 aa14.89□□□□□ -0.03
Rnft1-201ENSMUST00000020827 Mroh2bQ7M6Y6 1581 aa14.87□□□□□ -0.03
Rnft1-201ENSMUST00000020827 Rad54l2Q99NG0 1466 aa14.87□□□□□ -0.03
Rnft1-201ENSMUST00000020827 Thoc2B1AZI6 1594 aaKnown RBP14.87□□□□□ -0.03
Rnft1-201ENSMUST00000020827 Eea1Q8BL66 1411 aa14.86□□□□□ -0.03
Rnft1-201ENSMUST00000020827 3425401B19RikD3Z1D3 1412 aa14.86□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 471.5 ms