RNA–Protein interactions for RNA: ENSMUST00000018315.9

Vmp1-201, Transcript of Vacuole membrane protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vmp1, Length 2,787 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vmp1-201ENSMUST00000018315 NischQ80TM9 1593 aa25.63■■□□□ 1.69
Vmp1-201ENSMUST00000018315 Gm35339A0A140LHH9 1649 aa25.23■■□□□ 1.63
Vmp1-201ENSMUST00000018315 Abcc9P70170 1546 aa24.86■■□□□ 1.57
Vmp1-201ENSMUST00000018315 Abcc8B2RUS7 1588 aa24.4■■□□□ 1.5
Vmp1-201ENSMUST00000018315 Rhox8Q6VSS7 320 aa23.6■■□□□ 1.37
Vmp1-201ENSMUST00000018315 ScribQ80U72 1612 aa22.94■■□□□ 1.26
Vmp1-201ENSMUST00000018315 Rtl1Q7M732 1744 aa22.74■■□□□ 1.23
Vmp1-201ENSMUST00000018315 Dcaf1Q80TR8 1506 aa22.57■■□□□ 1.2
Vmp1-201ENSMUST00000018315 Rb1cc1Q9ESK9 1588 aa22.46■■□□□ 1.19
Vmp1-201ENSMUST00000018315 Kdm5dQ62240 1548 aa22.45■■□□□ 1.18
Vmp1-201ENSMUST00000018315 Ccdc180J3QNE4 1664 aa22.32■■□□□ 1.16
Vmp1-201ENSMUST00000018315 NacadQ5SWP3 1504 aa22.21■■□□□ 1.15
Vmp1-201ENSMUST00000018315 Zcchc6Q5BLK4 1491 aaKnown RBP22.21■■□□□ 1.15
Vmp1-201ENSMUST00000018315 Baz1aO88379 1555 aa22.13■■□□□ 1.13
Vmp1-201ENSMUST00000018315 Ccdc136Q3TVA9 1136 aa21.96■■□□□ 1.11
Vmp1-201ENSMUST00000018315 Sycp2Q9CUU3 1500 aa21.77■■□□□ 1.07
Vmp1-201ENSMUST00000018315 Crybg2B7ZCC2 1516 aa21.64■■□□□ 1.06
Vmp1-201ENSMUST00000018315 Smarca2Q6DIC0 1577 aa21.62■■□□□ 1.05
Vmp1-201ENSMUST00000018315 BicraF8VPZ9 1578 aa21.38■■□□□ 1.01
Vmp1-201ENSMUST00000018315 Trim41Q5NCC3 630 aa21.31■■□□□ 1
Vmp1-201ENSMUST00000018315 HrcG5E8J6 738 aa21.31■■□□□ 1
Vmp1-201ENSMUST00000018315 Cecr2E9Q2Z1 1453 aa21.28■■□□□ 1
Vmp1-201ENSMUST00000018315 Brd4Q9ESU6 1400 aaKnown RBP21.06■□□□□ 0.96
Vmp1-201ENSMUST00000018315 Synj1Q8CHC4 1574 aa21.02■□□□□ 0.96
Vmp1-201ENSMUST00000018315 Cngb1E1AZ71 1325 aa21■□□□□ 0.95
Vmp1-201ENSMUST00000018315 Ehmt2Q9Z148 1263 aaKnown RBP20.93■□□□□ 0.94
Vmp1-201ENSMUST00000018315 CftrP26361 1476 aa20.87■□□□□ 0.93
Vmp1-201ENSMUST00000018315 Cep164Q5DU05 1446 aa20.85■□□□□ 0.93
Vmp1-201ENSMUST00000018315 Chic1Q8CBW7 227 aa20.83■□□□□ 0.92
Vmp1-201ENSMUST00000018315 Rsf1E9PWW9 1441 aaKnown RBP20.82■□□□□ 0.92
Vmp1-201ENSMUST00000018315 Golga3P55937 1487 aa20.8■□□□□ 0.92
Vmp1-201ENSMUST00000018315 Esf1Q3V1V3 845 aaKnown RBP20.78■□□□□ 0.92
Vmp1-201ENSMUST00000018315 Smarca4Q3TKT4 1613 aaKnown RBP20.78■□□□□ 0.92
Vmp1-201ENSMUST00000018315 Ccdc88bQ4QRL3 1481 aa20.74■□□□□ 0.91
Vmp1-201ENSMUST00000018315 Cttnbp2B9EJA2 1648 aa20.73■□□□□ 0.91
Vmp1-201ENSMUST00000018315 Gab3Q8BSM5 595 aa20.65■□□□□ 0.9
Vmp1-201ENSMUST00000018315 Top2bQ64511 1612 aa20.59■□□□□ 0.89
Vmp1-201ENSMUST00000018315 Iqgap2Q3UQ44 1575 aa20.55■□□□□ 0.88
Vmp1-201ENSMUST00000018315 Cc2d2aQ8CFW7 1633 aa20.5■□□□□ 0.87
Vmp1-201ENSMUST00000018315 Acin1Q9JIX8 1338 aaKnown RBP20.47■□□□□ 0.87
Vmp1-201ENSMUST00000018315 Atad2bE9Q166 1460 aaKnown RBP20.45■□□□□ 0.86
Vmp1-201ENSMUST00000018315 Rpgrip1Q9EPQ2 1331 aa20.39■□□□□ 0.85
Vmp1-201ENSMUST00000018315 Pds5bQ4VA53 1446 aaKnown RBP20.38■□□□□ 0.85
Vmp1-201ENSMUST00000018315 Fmn1Q05860 1466 aa20.27■□□□□ 0.84
Vmp1-201ENSMUST00000018315 Frmpd1A2AKB4 1549 aa20.19■□□□□ 0.82
Vmp1-201ENSMUST00000018315 Top2aQ01320 1528 aaKnown RBP20.17■□□□□ 0.82
Vmp1-201ENSMUST00000018315 Wdr62Q3U3T8 1523 aa20.16■□□□□ 0.82
Vmp1-201ENSMUST00000018315 Rapgef2Q8CHG7 1496 aa20.07■□□□□ 0.8
Vmp1-201ENSMUST00000018315 Ercc6F8VPZ5 1481 aa20.05■□□□□ 0.8
Vmp1-201ENSMUST00000018315 TnnQ80Z71 1560 aa20.02■□□□□ 0.8
Vmp1-201ENSMUST00000018315 Unc13aQ4KUS2 1712 aa19.98■□□□□ 0.79
Vmp1-201ENSMUST00000018315 Myt1lP97500 1187 aa19.96■□□□□ 0.79
Vmp1-201ENSMUST00000018315 Cep162Q6ZQ06 1403 aa19.93■□□□□ 0.78
Vmp1-201ENSMUST00000018315 Npm2Q80W85 207 aa19.93■□□□□ 0.78
Vmp1-201ENSMUST00000018315 Kif15Q6P9L6 1387 aa19.93■□□□□ 0.78
Vmp1-201ENSMUST00000018315 Il27Q8K3I6 234 aa19.92■□□□□ 0.78
Vmp1-201ENSMUST00000018315 Lamc3Q9R0B6 1581 aa19.91■□□□□ 0.78
Vmp1-201ENSMUST00000018315 Thoc2B1AZI6 1594 aaKnown RBP19.82■□□□□ 0.76
Vmp1-201ENSMUST00000018315 PtprkP35822 1457 aa19.81■□□□□ 0.76
Vmp1-201ENSMUST00000018315 Eif4g1Q6NZJ6 1600 aaKnown RBP19.77■□□□□ 0.75
Vmp1-201ENSMUST00000018315 Camsap1A2AHC3 1581 aa19.76■□□□□ 0.75
Vmp1-201ENSMUST00000018315 Mier1Q5UAK0 511 aa19.74■□□□□ 0.75
Vmp1-201ENSMUST00000018315 Phldb1Q6PDH0 1371 aaKnown RBP19.72■□□□□ 0.75
Vmp1-201ENSMUST00000018315 UbtfP25976 765 aaKnown RBP19.69■□□□□ 0.74
Vmp1-201ENSMUST00000018315 Arhgap35Q91YM2 1499 aa19.69■□□□□ 0.74
Vmp1-201ENSMUST00000018315 Ubl4bQ9CQ84 188 aa19.66■□□□□ 0.74
Vmp1-201ENSMUST00000018315 NrkQ9R0G8 1455 aa19.65■□□□□ 0.74
Vmp1-201ENSMUST00000018315 Ccdc18Q640L5 1455 aa19.64■□□□□ 0.73
Vmp1-201ENSMUST00000018315 Cux2P70298 1426 aa19.63■□□□□ 0.73
Vmp1-201ENSMUST00000018315 Shroom4Q1W617 1475 aa19.63■□□□□ 0.73
Vmp1-201ENSMUST00000018315 Grin2bQ01097 1482 aa19.61■□□□□ 0.73
Vmp1-201ENSMUST00000018315 Clip1Q922J3 1391 aa19.61■□□□□ 0.73
Vmp1-201ENSMUST00000018315 Plekhg3Q4VAC9 1341 aa19.57■□□□□ 0.72
Vmp1-201ENSMUST00000018315 Fam135aQ6NS59 1506 aa19.57■□□□□ 0.72
Vmp1-201ENSMUST00000018315 Zeb1Q64318 1117 aa19.55■□□□□ 0.72
Vmp1-201ENSMUST00000018315 Npm1Q61937 292 aaKnown RBP19.51■□□□□ 0.71
Vmp1-201ENSMUST00000018315 Ap3b1Q9Z1T1 1105 aa19.5■□□□□ 0.71
Vmp1-201ENSMUST00000018315 Baz1bQ9Z277 1479 aa19.47■□□□□ 0.71
Vmp1-201ENSMUST00000018315 Pcgf6Q99NA9 353 aa19.46■□□□□ 0.71
Vmp1-201ENSMUST00000018315 Arap1Q4LDD4 1452 aa19.45■□□□□ 0.7
Vmp1-201ENSMUST00000018315 Map3k1P53349 1493 aa19.43■□□□□ 0.7
Vmp1-201ENSMUST00000018315 Mroh2bQ7M6Y6 1581 aa19.43■□□□□ 0.7
Vmp1-201ENSMUST00000018315 NefmP08553 848 aa19.42■□□□□ 0.7
Vmp1-201ENSMUST00000018315 Dnajc5bQ9CQ94 199 aa19.41■□□□□ 0.7
Vmp1-201ENSMUST00000018315 Eea1Q8BL66 1411 aa19.41■□□□□ 0.7
Vmp1-201ENSMUST00000018315 LrpprcQ6PB66 1392 aaKnown RBP19.41■□□□□ 0.7
Vmp1-201ENSMUST00000018315 Setd5Q5XJV7 1441 aa19.39■□□□□ 0.69
Vmp1-201ENSMUST00000018315 Supt5hO55201 1082 aaKnown RBP19.38■□□□□ 0.69
Vmp1-201ENSMUST00000018315 PogzQ8BZH4 1409 aaKnown RBP19.37■□□□□ 0.69
Vmp1-201ENSMUST00000018315 Duox2A2AQ99 1517 aa19.36■□□□□ 0.69
Vmp1-201ENSMUST00000018315 Arhgef5E9Q7D5 1581 aa19.32■□□□□ 0.68
Vmp1-201ENSMUST00000018315 Efcab5A0JP43 1406 aa19.31■□□□□ 0.68
Vmp1-201ENSMUST00000018315 Ankrd26Q811D2 1581 aa19.3■□□□□ 0.68
Vmp1-201ENSMUST00000018315 Dhx29Q6PGC1 1365 aaKnown RBP19.3■□□□□ 0.68
Vmp1-201ENSMUST00000018315 Samd9lQ69Z37 1561 aa19.28■□□□□ 0.68
Vmp1-201ENSMUST00000018315 AqrQ8CFQ3 1481 aaKnown RBP19.25■□□□□ 0.67
Vmp1-201ENSMUST00000018315 Cux1P53564 1515 aa19.24■□□□□ 0.67
Vmp1-201ENSMUST00000018315 Ncapd3Q6ZQK0 1506 aa19.23■□□□□ 0.67
Vmp1-201ENSMUST00000018315 Kif21aQ9QXL2 1672 aa19.23■□□□□ 0.67
Vmp1-201ENSMUST00000018315 Erich3F6QRE9 1637 aa19.21■□□□□ 0.67
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms