RNA–Protein interactions for RNA: YNL209W

SSB2, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB2, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB2	YNL209W	ESC2	Q06340	456 aa		5.2	□□□□□ -1.58
SSB2	YNL209W	CFT2	Q12102	859 aa	Predicted RBP	5.2	□□□□□ -1.58
SSB2	YNL209W	PSF3	Q12146	194 aa		5.2	□□□□□ -1.58
SSB2	YNL209W	YLL054C	Q12244	843 aa		5.2	□□□□□ -1.58
SSB2	YNL209W	NBL1	Q3E7Y6	73 aa		5.2	□□□□□ -1.58
SSB2	YNL209W	CIT1	P00890	479 aa		5.2	□□□□□ -1.58
SSB2	YNL209W	YKL222C	P35995	705 aa		5.2	□□□□□ -1.58
SSB2	YNL209W	GTT3	P39996	337 aa		5.2	□□□□□ -1.58
SSB2	YNL209W	ALG2	P43636	503 aa		5.2	□□□□□ -1.58
SSB2	YNL209W	MMR1	Q06324	491 aa		5.2	□□□□□ -1.58
SSB2	YNL209W	RAD51	P25454	400 aa		5.19	□□□□□ -1.58
SSB2	YNL209W	RPL8B	P29453	256 aa	Known RBP	5.19	□□□□□ -1.58
SSB2	YNL209W	CHS3	P29465	1165 aa		5.19	□□□□□ -1.58
SSB2	YNL209W	AFG2	P32794	780 aa		5.19	□□□□□ -1.58
SSB2	YNL209W	YKU70	P32807	602 aa		5.19	□□□□□ -1.58
SSB2	YNL209W	SSP1	P38871	571 aa		5.19	□□□□□ -1.58
SSB2	YNL209W	AIM20	P40451	204 aa		5.19	□□□□□ -1.58
SSB2	YNL209W	HOS4	P40480	1083 aa		5.19	□□□□□ -1.58
SSB2	YNL209W	CUE3	P53137	624 aa	Known RBP	5.19	□□□□□ -1.58
SSB2	YNL209W	SMD2	Q06217	110 aa	Known RBP	5.19	□□□□□ -1.58
SSB2	YNL209W	GRX6	Q12438	231 aa		5.19	□□□□□ -1.58
SSB2	YNL209W	TUF1	P02992	437 aa	Known RBP	5.18	□□□□□ -1.58
SSB2	YNL209W	SRP54	P20424	541 aa	Known RBP	5.18	□□□□□ -1.58
SSB2	YNL209W	SEC20	P28791	383 aa		5.18	□□□□□ -1.58
SSB2	YNL209W	DEP1	P31385	405 aa		5.18	□□□□□ -1.58
SSB2	YNL209W	CBF5	P33322	483 aa	Known RBP RIP-Chip data	5.18	□□□□□ -1.58	not detected
SSB2	YNL209W	RTT107	P38850	1070 aa		5.18	□□□□□ -1.58
SSB2	YNL209W	LSC2	P53312	427 aa		5.18	□□□□□ -1.58
SSB2	YNL209W	NAF1	P53919	492 aa	Known RBP	5.18	□□□□□ -1.58
SSB2	YNL209W	TRS120	Q04183	1289 aa		5.18	□□□□□ -1.58
SSB2	YNL209W	YOR296W	Q08748	1289 aa		5.18	□□□□□ -1.58
SSB2	YNL209W	APL4	Q12028	832 aa		5.18	□□□□□ -1.58
SSB2	YNL209W	RRG1	Q12167	365 aa	Predicted RBP	5.18	□□□□□ -1.58
SSB2	YNL209W	HIS4	P00815	799 aa	Known RBP	5.18	□□□□□ -1.58
SSB2	YNL209W	PET111	P08468	800 aa		5.18	□□□□□ -1.58
SSB2	YNL209W	RRP43	P25359	394 aa	Predicted RBP	5.18	□□□□□ -1.58
SSB2	YNL209W	YGL138C	P53122	345 aa		5.18	□□□□□ -1.58
SSB2	YNL209W	VPS30	Q02948	557 aa		5.18	□□□□□ -1.58
SSB2	YNL209W	DPL1	Q05567	589 aa		5.18	□□□□□ -1.58
SSB2	YNL209W	PDC1	P06169	563 aa	Known RBP	5.17	□□□□□ -1.58
SSB2	YNL209W	HSC82	P15108	705 aa	Known RBP	5.17	□□□□□ -1.58
SSB2	YNL209W	SAM2	P19358	384 aa	Known RBP	5.17	□□□□□ -1.58
SSB2	YNL209W	SPB4	P25808	606 aa	Predicted RBP	5.17	□□□□□ -1.58
SSB2	YNL209W	PIM1	P36775	1133 aa		5.17	□□□□□ -1.58
SSB2	YNL209W	STV1	P37296	890 aa		5.17	□□□□□ -1.58
SSB2	YNL209W	MGA2	P40578	1113 aa		5.17	□□□□□ -1.58
SSB2	YNL209W	SMC3	P47037	1230 aa		5.17	□□□□□ -1.58
SSB2	YNL209W	STR2	P47164	639 aa		5.17	□□□□□ -1.58
SSB2	YNL209W	RTS3	P53289	263 aa		5.17	□□□□□ -1.58
SSB2	YNL209W	RCF1	Q03713	159 aa		5.17	□□□□□ -1.58
SSB2	YNL209W	HCR1	Q05775	265 aa	Known RBP	5.17	□□□□□ -1.58
SSB2	YNL209W	SUE1	Q06524	206 aa		5.17	□□□□□ -1.58
SSB2	YNL209W	DSE3	Q08729	430 aa		5.17	□□□□□ -1.58
SSB2	YNL209W	CEX1	Q12453	761 aa		5.17	□□□□□ -1.58
SSB2	YNL209W	ALG1	P16661	449 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	SRM1	P21827	482 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	PRE8	P23639	250 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	BMH1	P29311	267 aa	Known RBP	5.16	□□□□□ -1.58
SSB2	YNL209W	SEC65	P29478	273 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	ADE17	P38009	592 aa	Known RBP	5.16	□□□□□ -1.58
SSB2	YNL209W	PCH2	P38126	564 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	SPT8	P38915	602 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	STT3	P39007	718 aa	Known RBP	5.16	□□□□□ -1.58
SSB2	YNL209W	TPM2	P40414	161 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	STU2	P46675	888 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	ASE1	P50275	885 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	FOL1	P53848	824 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	MDM1	Q01846	1127 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	SEN54	Q02825	467 aa	Predicted RBP	5.16	□□□□□ -1.58
SSB2	YNL209W	GFD1	Q04839	188 aa	Known RBP	5.16	□□□□□ -1.58
SSB2	YNL209W	ACK1	Q07622	623 aa	Predicted RBP	5.16	□□□□□ -1.58
SSB2	YNL209W	YOL075C	Q08234	1294 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	YPL216W	Q08964	1102 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	TIP41	Q12199	356 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	CDC37	P06101	506 aa	Known RBP	5.16	□□□□□ -1.58
SSB2	YNL209W	CTT1	P06115	562 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	NUC1	P08466	329 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	GAP1	P19145	602 aa	Predicted RBP	5.16	□□□□□ -1.58
SSB2	YNL209W	MAK11	P20484	414 aa	Known RBP	5.16	□□□□□ -1.58
SSB2	YNL209W	MCM3	P24279	971 aa	Known RBP	5.16	□□□□□ -1.58
SSB2	YNL209W	PSO2	P30620	661 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	RPC82	P32349	654 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	YET1	P35723	206 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	SHM1	P37292	490 aa	Predicted RBP	5.16	□□□□□ -1.58
SSB2	YNL209W	ERG7	P38604	731 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	YER156C	P40093	338 aa	Known RBP	5.16	□□□□□ -1.58
SSB2	YNL209W	TFG2	P41896	400 aa	Predicted RBP	5.16	□□□□□ -1.58
SSB2	YNL209W	CIT3	P43635	486 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	YGR237C	P50089	785 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	VID30	P53076	958 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	SDA1	P53313	767 aa	Known RBP	5.16	□□□□□ -1.58
SSB2	YNL209W	VPS75	P53853	264 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	FAR11	P53917	953 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	HOS3	Q02959	697 aa	Known RBP	5.16	□□□□□ -1.58
SSB2	YNL209W	CEF1	Q03654	590 aa	Predicted RBP	5.16	□□□□□ -1.58
SSB2	YNL209W	ADY4	Q05955	493 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	YDL124W	Q07551	312 aa	Known RBP	5.16	□□□□□ -1.58
SSB2	YNL209W	TLG2	Q08144	397 aa		5.16	□□□□□ -1.58
SSB2	YNL209W	RPS6A	P0CX37	236 aa	Known RBP	5.15	□□□□□ -1.59
SSB2	YNL209W	RPS6B	P0CX38	236 aa	Predicted RBP	5.15	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms