RNA–Protein interactions for RNA: YMR090W

YMR090W, Transcript of Putative protein of unknown function, yeast

Gene YMR090W, Length 684 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YMR090W	YMR090W	SPP382	Q06411	708 aa	Predicted RBP	13.52	□□□□□ -0.25
YMR090W	YMR090W	DEP1	P31385	405 aa		13.51	□□□□□ -0.25
YMR090W	YMR090W	SRB4	P32569	687 aa		13.51	□□□□□ -0.25
YMR090W	YMR090W	BYE1	P36106	594 aa		13.51	□□□□□ -0.25
YMR090W	YMR090W	VPS8	P39702	1274 aa		13.51	□□□□□ -0.25
YMR090W	YMR090W	RAD26	P40352	1085 aa		13.51	□□□□□ -0.25
YMR090W	YMR090W	VAC14	Q06708	880 aa		13.51	□□□□□ -0.25
YMR090W	YMR090W	YKL068W-A	Q3E826	78 aa		13.51	□□□□□ -0.25
YMR090W	YMR090W	RPO26	P20435	155 aa		13.5	□□□□□ -0.25
YMR090W	YMR090W	SPB4	P25808	606 aa	Predicted RBP	13.5	□□□□□ -0.25
YMR090W	YMR090W	RPL8B	P29453	256 aa	Known RBP	13.5	□□□□□ -0.25
YMR090W	YMR090W	NFU1	P32860	256 aa		13.5	□□□□□ -0.25
YMR090W	YMR090W	SAS3	P34218	831 aa		13.5	□□□□□ -0.25
YMR090W	YMR090W	RPG1	P38249	964 aa	Known RBP	13.5	□□□□□ -0.25
YMR090W	YMR090W	CCT3	P39077	534 aa	Known RBP	13.5	□□□□□ -0.25
YMR090W	YMR090W	ERG5	P54781	538 aa		13.5	□□□□□ -0.25
YMR090W	YMR090W	RRP6	Q12149	733 aa	Known RBP	13.5	□□□□□ -0.25
YMR090W	YMR090W	OSH2	Q12451	1283 aa		13.5	□□□□□ -0.25
YMR090W	YMR090W	FOB1	O13329	566 aa		13.49	□□□□□ -0.25
YMR090W	YMR090W	MAK11	P20484	414 aa	Known RBP	13.49	□□□□□ -0.25
YMR090W	YMR090W	MIP6	P38760	659 aa	Known RBP	13.49	□□□□□ -0.25
YMR090W	YMR090W	LYS14	P40971	790 aa		13.49	□□□□□ -0.25
YMR090W	YMR090W	RET3	P53600	189 aa		13.49	□□□□□ -0.25
YMR090W	YMR090W	RRB1	Q04225	511 aa	Known RBP	13.49	□□□□□ -0.25
YMR090W	YMR090W	GIS4	Q04233	774 aa		13.49	□□□□□ -0.25
YMR090W	YMR090W	TLG2	Q08144	397 aa		13.49	□□□□□ -0.25
YMR090W	YMR090W	NEW1	Q08972	1196 aa	Known RBP	13.49	□□□□□ -0.25
YMR090W	YMR090W	PLP2	Q12017	286 aa		13.49	□□□□□ -0.25
YMR090W	YMR090W	RPS6A	P0CX37	236 aa	Known RBP	13.48	□□□□□ -0.25
YMR090W	YMR090W	RPS6B	P0CX38	236 aa	Predicted RBP	13.48	□□□□□ -0.25
YMR090W	YMR090W	SNF3	P10870	884 aa		13.48	□□□□□ -0.25
YMR090W	YMR090W	CCC2	P38995	1004 aa		13.48	□□□□□ -0.25
YMR090W	YMR090W	STT3	P39007	718 aa	Known RBP	13.48	□□□□□ -0.25
YMR090W	YMR090W	SEC9	P40357	651 aa		13.48	□□□□□ -0.25
YMR090W	YMR090W	YAP5	P40574	245 aa		13.48	□□□□□ -0.25
YMR090W	YMR090W	MVP1	P40959	511 aa	Known RBP	13.48	□□□□□ -0.25
YMR090W	YMR090W	APL6	P46682	809 aa		13.48	□□□□□ -0.25
YMR090W	YMR090W	MRS2	Q01926	470 aa		13.48	□□□□□ -0.25
YMR090W	YMR090W	RNT1	Q02555	471 aa		13.48	□□□□□ -0.25
YMR090W	YMR090W	WRS1	Q12109	432 aa	Known RBP	13.48	□□□□□ -0.25
YMR090W	YMR090W	FIG2	P25653	1609 aa		13.48	□□□□□ -0.25
YMR090W	YMR090W	MTF2	P10849	440 aa		13.47	□□□□□ -0.25
YMR090W	YMR090W	SEC20	P28791	383 aa		13.47	□□□□□ -0.25
YMR090W	YMR090W	THI6	P41835	540 aa		13.47	□□□□□ -0.25
YMR090W	YMR090W	YGR130C	P53278	816 aa		13.47	□□□□□ -0.25
YMR090W	YMR090W	TRS120	Q04183	1289 aa		13.47	□□□□□ -0.25
YMR090W	YMR090W	CSM3	Q04659	317 aa		13.47	□□□□□ -0.25
YMR090W	YMR090W	YMR074C	Q04773	145 aa		13.47	□□□□□ -0.25
YMR090W	YMR090W	OPY2	Q06810	360 aa		13.47	□□□□□ -0.25
YMR090W	YMR090W	SLK19	Q08581	821 aa	Known RBP	13.47	□□□□□ -0.25
YMR090W	YMR090W	CLB1	P24868	471 aa		13.46	□□□□□ -0.25
YMR090W	YMR090W	CNS1	P33313	385 aa		13.46	□□□□□ -0.25
YMR090W	YMR090W	PFF1	P38244	976 aa		13.46	□□□□□ -0.25
YMR090W	YMR090W	AIP1	P46680	615 aa	Known RBP	13.46	□□□□□ -0.25
YMR090W	YMR090W	UBA2	P52488	636 aa		13.46	□□□□□ -0.25
YMR090W	YMR090W	SDA1	P53313	767 aa	Known RBP	13.46	□□□□□ -0.25
YMR090W	YMR090W	ATG23	Q06671	453 aa		13.46	□□□□□ -0.25
YMR090W	YMR090W	STI1	P15705	589 aa	Known RBP RIP-Chip data	13.45	□□□□□ -0.26	not detected
YMR090W	YMR090W	SHM1	P37292	490 aa	Predicted RBP	13.45	□□□□□ -0.26
YMR090W	YMR090W	TOS1	P38288	455 aa		13.45	□□□□□ -0.26
YMR090W	YMR090W	SMC2	P38989	1170 aa	Known RBP	13.45	□□□□□ -0.26
YMR090W	YMR090W	ATG3	P40344	310 aa		13.45	□□□□□ -0.26
YMR090W	YMR090W	SHQ1	P40486	507 aa	Predicted RBP	13.45	□□□□□ -0.26
YMR090W	YMR090W	BOP3	P53958	396 aa		13.45	□□□□□ -0.26
YMR090W	YMR090W	RIX7	Q07844	837 aa	Known RBP	13.45	□□□□□ -0.26
YMR090W	YMR090W	DSE3	Q08729	430 aa		13.45	□□□□□ -0.26
YMR090W	YMR090W	OM45	P16547	393 aa		13.44	□□□□□ -0.26
YMR090W	YMR090W	PSO2	P30620	661 aa		13.44	□□□□□ -0.26
YMR090W	YMR090W	VPS41	P38959	992 aa		13.44	□□□□□ -0.26
YMR090W	YMR090W	VFA1	P40080	203 aa		13.44	□□□□□ -0.26
YMR090W	YMR090W	EFM4	P40516	257 aa		13.44	□□□□□ -0.26
YMR090W	YMR090W	TUF1	P02992	437 aa	Known RBP	13.43	□□□□□ -0.26
YMR090W	YMR090W	CKA2	P19454	339 aa		13.43	□□□□□ -0.26
YMR090W	YMR090W	CKI1	P20485	582 aa		13.43	□□□□□ -0.26
YMR090W	YMR090W	MSH1	P25846	959 aa		13.43	□□□□□ -0.26
YMR090W	YMR090W	PRO3	P32263	286 aa	Known RBP	13.43	□□□□□ -0.26
YMR090W	YMR090W	TIF4632	P39936	914 aa	Known RBP	13.43	□□□□□ -0.26
YMR090W	YMR090W	BNI5	P53890	448 aa	Known RBP	13.43	□□□□□ -0.26
YMR090W	YMR090W	MDM1	Q01846	1127 aa		13.43	□□□□□ -0.26
YMR090W	YMR090W	SMD2	Q06217	110 aa	Known RBP	13.43	□□□□□ -0.26
YMR090W	YMR090W	KEL3	Q08979	651 aa	Predicted RBP	13.43	□□□□□ -0.26
YMR090W	YMR090W	TOP1	P04786	769 aa		13.42	□□□□□ -0.26
YMR090W	YMR090W	MUD2	P36084	527 aa	Known RBP	13.42	□□□□□ -0.26
YMR090W	YMR090W	YGR153W	P48238	217 aa		13.42	□□□□□ -0.26
YMR090W	YMR090W	LSC2	P53312	427 aa		13.42	□□□□□ -0.26
YMR090W	YMR090W	YAP7	Q08182	245 aa		13.42	□□□□□ -0.26
YMR090W	YMR090W	PUS6	P53294	404 aa		13.41	□□□□□ -0.26
YMR090W	YMR090W	FOL1	P53848	824 aa		13.41	□□□□□ -0.26
YMR090W	YMR090W	ERO1	Q03103	563 aa		13.41	□□□□□ -0.26
YMR090W	YMR090W	OMS1	Q06668	471 aa		13.41	□□□□□ -0.26
YMR090W	YMR090W	RUD3	Q12234	484 aa	Known RBP	13.41	□□□□□ -0.26
YMR090W	YMR090W	SPO12	P17123	173 aa		13.4	□□□□□ -0.26
YMR090W	YMR090W	LYS4	P49367	693 aa	Predicted RBP	13.4	□□□□□ -0.26
YMR090W	YMR090W	HFM1	P51979	1187 aa		13.4	□□□□□ -0.26
YMR090W	YMR090W	DSE4	P53753	1117 aa		13.4	□□□□□ -0.26
YMR090W	YMR090W	UME1	Q03010	460 aa		13.4	□□□□□ -0.26
YMR090W	YMR090W	PRP42	Q03776	544 aa	Known RBP	13.4	□□□□□ -0.26
YMR090W	YMR090W	RPC53	P25441	422 aa		13.39	□□□□□ -0.27
YMR090W	YMR090W	YKL091C	P33324	310 aa	Known RBP	13.39	□□□□□ -0.27
YMR090W	YMR090W	UGA2	P38067	497 aa		13.39	□□□□□ -0.27

Retrieved 100 of 5,963 RNA–protein pairs in 71.1 ms