RNA–Protein interactions for RNA: YLR268W

SEC22, Transcript of R-SNARE protein, yeastyeast

Gene SEC22, Length 645 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC22YLR268W UTP5Q04177 643 aaKnown RBP4.82□□□□□ -1.64
SEC22YLR268W NOC3Q07896 663 aaPredicted RBP4.82□□□□□ -1.64
SEC22YLR268W LAP2Q10740 671 aa4.82□□□□□ -1.64
SEC22YLR268W CTS1P29029 562 aa4.81□□□□□ -1.64
SEC22YLR268W SAM37P50110 327 aa4.81□□□□□ -1.64
SEC22YLR268W YDR132CQ03900 495 aa4.8□□□□□ -1.64
SEC22YLR268W YCS4Q06156 1176 aa4.8□□□□□ -1.64
SEC22YLR268W VMA4P22203 233 aaKnown RBP4.79□□□□□ -1.64
SEC22YLR268W AIM26P32858 118 aa4.79□□□□□ -1.64
SEC22YLR268W SHM2P37291 469 aaKnown RBP4.79□□□□□ -1.64
SEC22YLR268W NMD3P38861 518 aaKnown RBP4.79□□□□□ -1.64
SEC22YLR268W GPI13Q07830 1017 aa4.79□□□□□ -1.64
SEC22YLR268W RSC58Q07979 502 aa4.79□□□□□ -1.64
SEC22YLR268W TUB2P02557 457 aaKnown RBP4.78□□□□□ -1.64
SEC22YLR268W MSH3P25336 1018 aa4.78□□□□□ -1.64
SEC22YLR268W CIC1P38779 376 aaKnown RBP4.78□□□□□ -1.64
SEC22YLR268W XKS1P42826 600 aa4.78□□□□□ -1.64
SEC22YLR268W YJL045WP47052 634 aa4.78□□□□□ -1.64
SEC22YLR268W RKM2Q03942 479 aa4.78□□□□□ -1.64
SEC22YLR268W NBA1Q08229 501 aaKnown RBP4.78□□□□□ -1.64
SEC22YLR268W ATG14P38270 344 aa4.77□□□□□ -1.65
SEC22YLR268W QNS1P38795 714 aaKnown RBP4.77□□□□□ -1.65
SEC22YLR268W FRT1Q99332 602 aa4.77□□□□□ -1.65
SEC22YLR268W TAD3Q9URQ3 322 aa4.77□□□□□ -1.65
SEC22YLR268W SPS1P08458 490 aa4.76□□□□□ -1.65
SEC22YLR268W YSC84P32793 468 aa4.76□□□□□ -1.65
SEC22YLR268W MDJ2P42834 146 aa4.76□□□□□ -1.65
SEC22YLR268W VPS53P47061 822 aa4.76□□□□□ -1.65
SEC22YLR268W UBP3Q01477 912 aaKnown RBP RIP-Chip data4.76□□□□□ -1.65not detected
SEC22YLR268W RLF2Q12495 606 aa4.76□□□□□ -1.65
SEC22YLR268W SCP160P06105 1222 aaKnown RBP RIP-Chip data4.75□□□□□ -1.65not detected
SEC22YLR268W GRS1P38088 690 aaKnown RBP4.75□□□□□ -1.65
SEC22YLR268W TAT2P38967 592 aa4.75□□□□□ -1.65
SEC22YLR268W HNT2P49775 206 aa4.75□□□□□ -1.65
SEC22YLR268W SGD1Q06132 899 aa4.75□□□□□ -1.65
SEC22YLR268W NUT2Q06213 157 aa4.75□□□□□ -1.65
SEC22YLR268W PNS1Q12412 539 aa4.75□□□□□ -1.65
SEC22YLR268W MPT5P39016 859 aaKnown RBP RIP-Chip data4.74□□□□□ -1.65not detected
SEC22YLR268W GCN5Q03330 439 aa4.74□□□□□ -1.65
SEC22YLR268W YOR352WQ08816 343 aa4.74□□□□□ -1.65
SEC22YLR268W RDH54P38086 958 aa4.73□□□□□ -1.65
SEC22YLR268W ERP5P38819 212 aa4.73□□□□□ -1.65
SEC22YLR268W LAM1P38851 1228 aa4.73□□□□□ -1.65
SEC22YLR268W MEF2P39677 819 aa4.73□□□□□ -1.65
SEC22YLR268W SPT20P50875 604 aa4.73□□□□□ -1.65
SEC22YLR268W COQ4O13525 335 aa4.72□□□□□ -1.65
SEC22YLR268W KAR2P16474 682 aaKnown RBP4.72□□□□□ -1.65
SEC22YLR268W PRP40P33203 583 aaKnown RBP4.72□□□□□ -1.65
SEC22YLR268W DOM34P33309 386 aa4.72□□□□□ -1.65
SEC22YLR268W ADD66P36040 267 aa4.72□□□□□ -1.65
SEC22YLR268W BAP2P38084 609 aa4.72□□□□□ -1.65
SEC22YLR268W PEX13P80667 386 aa4.72□□□□□ -1.65
SEC22YLR268W CDC3P32457 520 aaKnown RBP4.71□□□□□ -1.66
SEC22YLR268W CCZ1P38273 704 aa4.71□□□□□ -1.66
SEC22YLR268W SEC26P41810 973 aaKnown RBP4.71□□□□□ -1.66
SEC22YLR268W RSM26P47141 266 aa4.71□□□□□ -1.66
SEC22YLR268W YNR063WP53749 607 aa4.71□□□□□ -1.66
SEC22YLR268W YBL113CQ7M4S9 792 aa4.71□□□□□ -1.66
SEC22YLR268W TRM2P33753 639 aa4.7□□□□□ -1.66
SEC22YLR268W SQT1P35184 431 aa4.7□□□□□ -1.66
SEC22YLR268W PEX28P38848 579 aa4.7□□□□□ -1.66
SEC22YLR268W ULP1Q02724 621 aa4.7□□□□□ -1.66
SEC22YLR268W PUS9Q12069 462 aa4.7□□□□□ -1.66
SEC22YLR268W PUF4P25339 888 aaKnown RBP RIP-Chip data4.69□□□□□ -1.66not detected
SEC22YLR268W GCD6P32501 712 aaKnown RBP4.69□□□□□ -1.66
SEC22YLR268W VPS35P34110 944 aa4.69□□□□□ -1.66
SEC22YLR268W RCL1Q08096 367 aaPredicted RBP4.69□□□□□ -1.66
SEC22YLR268W CYC1P00044 109 aaPredicted RBP4.68□□□□□ -1.66
SEC22YLR268W SSA1P10591 642 aaKnown RBP4.68□□□□□ -1.66
SEC22YLR268W PIK1P39104 1066 aa4.68□□□□□ -1.66
SEC22YLR268W TNA1P53322 534 aa4.68□□□□□ -1.66
SEC22YLR268W HOS3Q02959 697 aaKnown RBP4.68□□□□□ -1.66
SEC22YLR268W DUS4Q06063 367 aa4.68□□□□□ -1.66
SEC22YLR268W KIP1P28742 1111 aa4.67□□□□□ -1.66
SEC22YLR268W AFG2P32794 780 aa4.67□□□□□ -1.66
SEC22YLR268W UGA4P32837 571 aa4.67□□□□□ -1.66
SEC22YLR268W YGL140CP53120 1219 aa4.67□□□□□ -1.66
SEC22YLR268W DAL4Q04895 635 aa4.67□□□□□ -1.66
SEC22YLR268W SNF5P18480 905 aa4.66□□□□□ -1.66
SEC22YLR268W STE11P23561 717 aa4.66□□□□□ -1.66
SEC22YLR268W RPN3P40016 523 aaKnown RBP4.66□□□□□ -1.66
SEC22YLR268W MSE1P48525 536 aa4.66□□□□□ -1.66
SEC22YLR268W URN1Q06525 465 aaKnown RBP4.66□□□□□ -1.66
SEC22YLR268W PHO4P07270 312 aaKnown RBP4.65□□□□□ -1.67
SEC22YLR268W HEM13P11353 328 aaKnown RBP4.65□□□□□ -1.67
SEC22YLR268W SEC23P15303 768 aaKnown RBP4.65□□□□□ -1.67
SEC22YLR268W YPT53P36019 220 aa4.65□□□□□ -1.67
SEC22YLR268W EST2Q06163 884 aa4.65□□□□□ -1.67
SEC22YLR268W RSB1Q08417 382 aa4.65□□□□□ -1.67
SEC22YLR268W YPL109CQ02981 657 aa4.64□□□□□ -1.67
SEC22YLR268W PLB2Q03674 706 aa4.64□□□□□ -1.67
SEC22YLR268W ADI1Q03677 179 aa4.64□□□□□ -1.67
SEC22YLR268W ROT1Q03691 256 aa4.64□□□□□ -1.67
SEC22YLR268W PTC5Q12511 572 aa4.64□□□□□ -1.67
SEC22YLR268W CDC20P26309 610 aa4.63□□□□□ -1.67
SEC22YLR268W YPL260WQ08977 551 aa4.63□□□□□ -1.67
SEC22YLR268W HAT1Q12341 374 aa4.63□□□□□ -1.67
SEC22YLR268W TAF13P11747 167 aa4.62□□□□□ -1.67
SEC22YLR268W HCM1P25364 564 aa4.62□□□□□ -1.67
SEC22YLR268W PMI40P29952 429 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 83.2 ms