RNA–Protein interactions for RNA: YJL179W

PFD1, Transcript of Subunit of heterohexameric prefoldin, yeastyeast

Gene PFD1, Length 330 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFD1YJL179W RSC58Q07979 502 aa3.61□□□□□ -1.83
PFD1YJL179W TY1A-GR1Q12085 440 aa3.61□□□□□ -1.83
PFD1YJL179W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.61□□□□□ -1.83
PFD1YJL179W TY1A-OLQ92392 440 aaKnown RBP3.61□□□□□ -1.83
PFD1YJL179W CYC1P00044 109 aaPredicted RBP3.6□□□□□ -1.83
PFD1YJL179W LST4P34239 828 aa3.6□□□□□ -1.83
PFD1YJL179W YKL077WP36081 392 aa3.6□□□□□ -1.83
PFD1YJL179W NMD3P38861 518 aaKnown RBP3.6□□□□□ -1.83
PFD1YJL179W RSC4Q02206 625 aa3.6□□□□□ -1.83
PFD1YJL179W PMT7Q06644 662 aa3.6□□□□□ -1.83
PFD1YJL179W PPM2Q08282 695 aa3.6□□□□□ -1.83
PFD1YJL179W ROT1Q03691 256 aa3.59□□□□□ -1.83
PFD1YJL179W TMA10Q06177 86 aa3.59□□□□□ -1.83
PFD1YJL179W RXT3Q07458 294 aa3.59□□□□□ -1.83
PFD1YJL179W CDC20P26309 610 aa3.58□□□□□ -1.84
PFD1YJL179W YAF9P53930 226 aa3.58□□□□□ -1.84
PFD1YJL179W RSA3Q05942 220 aaKnown RBP3.58□□□□□ -1.84
PFD1YJL179W ACK1Q07622 623 aaPredicted RBP3.58□□□□□ -1.84
PFD1YJL179W MCM5P29496 775 aaKnown RBP3.57□□□□□ -1.84
PFD1YJL179W OAR1P35731 278 aa3.57□□□□□ -1.84
PFD1YJL179W ATF1P40353 525 aa3.57□□□□□ -1.84
PFD1YJL179W SLS1P42900 643 aa3.57□□□□□ -1.84
PFD1YJL179W PHO23P50947 330 aa3.57□□□□□ -1.84
PFD1YJL179W LAP2Q10740 671 aa3.57□□□□□ -1.84
PFD1YJL179W PMA1P05030 918 aaKnown RBP3.56□□□□□ -1.84
PFD1YJL179W FUR4P05316 633 aaKnown RBP3.56□□□□□ -1.84
PFD1YJL179W SHU2P38957 223 aa3.56□□□□□ -1.84
PFD1YJL179W SEC26P41810 973 aaKnown RBP3.56□□□□□ -1.84
PFD1YJL179W CPS1P27614 576 aa3.55□□□□□ -1.84
PFD1YJL179W DEF1P35732 738 aaKnown RBP3.55□□□□□ -1.84
PFD1YJL179W EXO5P38289 585 aa3.55□□□□□ -1.84
PFD1YJL179W MTR4P47047 1073 aaKnown RBP3.55□□□□□ -1.84
PFD1YJL179W YJL045WP47052 634 aa3.55□□□□□ -1.84
PFD1YJL179W KIN4Q01919 800 aa3.55□□□□□ -1.84
PFD1YJL179W PLB2Q03674 706 aa3.55□□□□□ -1.84
PFD1YJL179W MOH1P38191 138 aa3.54□□□□□ -1.84
PFD1YJL179W UBA2P52488 636 aa3.54□□□□□ -1.84
PFD1YJL179W NUT1P53114 1132 aa3.54□□□□□ -1.84
PFD1YJL179W UFD2P54860 961 aa3.54□□□□□ -1.84
PFD1YJL179W DCG1P32460 244 aa3.53□□□□□ -1.84
PFD1YJL179W YSC84P32793 468 aa3.53□□□□□ -1.84
PFD1YJL179W NEM1P38757 446 aa3.53□□□□□ -1.84
PFD1YJL179W MSS4P38994 779 aa3.53□□□□□ -1.84
PFD1YJL179W GPB1Q08886 897 aa3.53□□□□□ -1.84
PFD1YJL179W COQ4O13525 335 aa3.52□□□□□ -1.85
PFD1YJL179W FLP1P03870 423 aa3.52□□□□□ -1.85
PFD1YJL179W CCZ1P38273 704 aa3.52□□□□□ -1.85
PFD1YJL179W RVS167P39743 482 aaKnown RBP3.52□□□□□ -1.85
PFD1YJL179W PBP1P53297 722 aaKnown RBP3.52□□□□□ -1.85
PFD1YJL179W CDC6P09119 513 aa3.5□□□□□ -1.85
PFD1YJL179W ATG14P38270 344 aa3.5□□□□□ -1.85
PFD1YJL179W GAL10P04397 699 aa3.49□□□□□ -1.85
PFD1YJL179W CUE2P36075 443 aaKnown RBP3.49□□□□□ -1.85
PFD1YJL179W QNS1P38795 714 aaKnown RBP3.49□□□□□ -1.85
PFD1YJL179W IOC3P43596 787 aa3.49□□□□□ -1.85
PFD1YJL179W LGE1Q02796 332 aaKnown RBP3.49□□□□□ -1.85
PFD1YJL179W RSM24Q03976 319 aa3.49□□□□□ -1.85
PFD1YJL179W UTP5Q04177 643 aaKnown RBP3.49□□□□□ -1.85
PFD1YJL179W BSC2Q05611 235 aa3.49□□□□□ -1.85
PFD1YJL179W RSB1Q08417 382 aa3.49□□□□□ -1.85
PFD1YJL179W BOL3P39724 118 aa3.48□□□□□ -1.85
PFD1YJL179W RCL1Q08096 367 aaPredicted RBP3.48□□□□□ -1.85
PFD1YJL179W CMP2P14747 604 aa3.47□□□□□ -1.85
PFD1YJL179W BAP2P38084 609 aa3.47□□□□□ -1.85
PFD1YJL179W XKS1P42826 600 aa3.47□□□□□ -1.85
PFD1YJL179W VPS53P47061 822 aa3.47□□□□□ -1.85
PFD1YJL179W VPS62P53285 467 aa3.47□□□□□ -1.85
PFD1YJL179W YNL011CP53980 444 aa3.47□□□□□ -1.85
PFD1YJL179W YLR224WQ05947 369 aa3.47□□□□□ -1.85
PFD1YJL179W NOB1Q08444 459 aaKnown RBP3.47□□□□□ -1.85
PFD1YJL179W STU2P46675 888 aa3.46□□□□□ -1.86
PFD1YJL179W YAP6Q03935 383 aa3.46□□□□□ -1.86
PFD1YJL179W PIK1P39104 1066 aa3.45□□□□□ -1.86
PFD1YJL179W NOG1Q02892 647 aaKnown RBP3.45□□□□□ -1.86
PFD1YJL179W YML083CQ04526 418 aa3.45□□□□□ -1.86
PFD1YJL179W SRM1P21827 482 aa3.44□□□□□ -1.86
PFD1YJL179W QRI1P43123 477 aaKnown RBP3.44□□□□□ -1.86
PFD1YJL179W TNA1P53322 534 aa3.44□□□□□ -1.86
PFD1YJL179W YNR063WP53749 607 aa3.44□□□□□ -1.86
PFD1YJL179W RFC5P38251 354 aa3.43□□□□□ -1.86
PFD1YJL179W MON1P53129 644 aa3.43□□□□□ -1.86
PFD1YJL179W CDC55Q00362 526 aa3.43□□□□□ -1.86
PFD1YJL179W HOS3Q02959 697 aaKnown RBP3.43□□□□□ -1.86
PFD1YJL179W RKM2Q03942 479 aa3.43□□□□□ -1.86
PFD1YJL179W NOP12Q08208 459 aaKnown RBP3.43□□□□□ -1.86
PFD1YJL179W AIM39Q08223 395 aa3.43□□□□□ -1.86
PFD1YJL179W SPO21Q12411 609 aa3.43□□□□□ -1.86
PFD1YJL179W VMA4P22203 233 aaKnown RBP3.42□□□□□ -1.86
PFD1YJL179W INP54Q08227 384 aaKnown RBP3.42□□□□□ -1.86
PFD1YJL179W EMC1P25574 760 aa3.41□□□□□ -1.86
PFD1YJL179W HMI1Q12039 706 aa3.41□□□□□ -1.86
PFD1YJL179W KIN2P13186 1147 aaKnown RBP3.4□□□□□ -1.87
PFD1YJL179W MSH3P25336 1018 aa3.4□□□□□ -1.87
PFD1YJL179W HRR25P29295 494 aaKnown RBP3.4□□□□□ -1.87
PFD1YJL179W GTF1P53260 183 aaPredicted RBP3.4□□□□□ -1.87
PFD1YJL179W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
PFD1YJL179W KIP1P28742 1111 aa3.39□□□□□ -1.87
PFD1YJL179W GLO3P38682 493 aaKnown RBP3.39□□□□□ -1.87
PFD1YJL179W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87 RIP-Chip
PFD1YJL179W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
Retrieved 100 of 5,963 RNA–protein pairs in 29.9 ms