RNA–Protein interactions for RNA: YJL081C

ARP4, Transcript of Nuclear actin-related protein involved in chromatin remodeling, yeast

Gene ARP4, Length 1,470 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ARP4	YJL081C	TPP1	Q03796	238 aa		4.95	□□□□□ -1.62
ARP4	YJL081C	WHI5	Q12416	295 aa		4.95	□□□□□ -1.62
ARP4	YJL081C	SQT1	P35184	431 aa		4.94	□□□□□ -1.62
ARP4	YJL081C	PRP43	P53131	767 aa	Known RBP	4.94	□□□□□ -1.62
ARP4	YJL081C	LPX1	Q12405	387 aa	Known RBP	4.94	□□□□□ -1.62
ARP4	YJL081C	GAS1	P22146	559 aa	Known RBP	4.94	□□□□□ -1.62
ARP4	YJL081C	HSE1	P38753	452 aa		4.94	□□□□□ -1.62
ARP4	YJL081C	UBP5	P39944	805 aa		4.94	□□□□□ -1.62
ARP4	YJL081C	XKS1	P42826	600 aa		4.94	□□□□□ -1.62
ARP4	YJL081C	YLR257W	Q06146	321 aa	Known RBP	4.94	□□□□□ -1.62
ARP4	YJL081C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
ARP4	YJL081C	RET1	P22276	1149 aa	Known RBP	4.93	□□□□□ -1.62
ARP4	YJL081C	ATG14	P38270	344 aa		4.93	□□□□□ -1.62
ARP4	YJL081C	PTC7	P38797	343 aa		4.93	□□□□□ -1.62
ARP4	YJL081C	PEX28	P38848	579 aa		4.93	□□□□□ -1.62
ARP4	YJL081C	THI12	P42883	340 aa		4.93	□□□□□ -1.62
ARP4	YJL081C	THI5	P43534	340 aa		4.93	□□□□□ -1.62
ARP4	YJL081C	THI11	P47183	340 aa		4.93	□□□□□ -1.62
ARP4	YJL081C	RSA3	Q05942	220 aa	Known RBP	4.93	□□□□□ -1.62
ARP4	YJL081C	TOS4	Q06266	489 aa		4.93	□□□□□ -1.62
ARP4	YJL081C	THI13	Q07748	340 aa		4.93	□□□□□ -1.62
ARP4	YJL081C	OXR1	Q08952	273 aa		4.93	□□□□□ -1.62
ARP4	YJL081C	LAP2	Q10740	671 aa		4.93	□□□□□ -1.62
ARP4	YJL081C	TSA1	P34760	196 aa	Known RBP	4.92	□□□□□ -1.62
ARP4	YJL081C	HIR3	P47171	1648 aa		4.92	□□□□□ -1.62
ARP4	YJL081C	XRN1	P22147	1528 aa	Known RBP	4.91	□□□□□ -1.62
ARP4	YJL081C	SEC20	P28791	383 aa		4.91	□□□□□ -1.62
ARP4	YJL081C	RDH54	P38086	958 aa		4.91	□□□□□ -1.62
ARP4	YJL081C	NMD3	P38861	518 aa	Known RBP	4.91	□□□□□ -1.62
ARP4	YJL081C	GTS1	P40956	396 aa		4.91	□□□□□ -1.62
ARP4	YJL081C	YPL109C	Q02981	657 aa		4.91	□□□□□ -1.62
ARP4	YJL081C	CDA2	Q06703	312 aa		4.91	□□□□□ -1.62
ARP4	YJL081C	HRK1	Q08732	759 aa	Known RBP	4.91	□□□□□ -1.62
ARP4	YJL081C	SAM35	P14693	329 aa		4.9	□□□□□ -1.62
ARP4	YJL081C	YHL012W	P38709	493 aa		4.9	□□□□□ -1.62
ARP4	YJL081C	FAA3	P39002	694 aa		4.9	□□□□□ -1.62
ARP4	YJL081C	YGL140C	P53120	1219 aa		4.9	□□□□□ -1.62
ARP4	YJL081C	ADI1	Q03677	179 aa		4.9	□□□□□ -1.62
ARP4	YJL081C	RKM2	Q03942	479 aa		4.9	□□□□□ -1.62
ARP4	YJL081C	RPT1	P33299	467 aa	Known RBP	4.89	□□□□□ -1.63
ARP4	YJL081C	ADD66	P36040	267 aa		4.89	□□□□□ -1.63
ARP4	YJL081C	YNR063W	P53749	607 aa		4.89	□□□□□ -1.63
ARP4	YJL081C	HXK1	P04806	485 aa	Known RBP	4.88	□□□□□ -1.63
ARP4	YJL081C	HEM13	P11353	328 aa	Known RBP	4.88	□□□□□ -1.63
ARP4	YJL081C	IPL1	P38991	367 aa		4.88	□□□□□ -1.63
ARP4	YJL081C	YJL045W	P47052	634 aa		4.88	□□□□□ -1.63
ARP4	YJL081C	SEC23	P15303	768 aa	Known RBP	4.88	□□□□□ -1.63
ARP4	YJL081C	MDL2	P33311	773 aa		4.88	□□□□□ -1.63
ARP4	YJL081C	QNS1	P38795	714 aa	Known RBP	4.88	□□□□□ -1.63
ARP4	YJL081C	VPS53	P47061	822 aa		4.88	□□□□□ -1.63
ARP4	YJL081C	SKI3	P17883	1432 aa	Known RBP	4.87	□□□□□ -1.63
ARP4	YJL081C	SWR1	Q05471	1514 aa		4.87	□□□□□ -1.63
ARP4	YJL081C	MON2	P48563	1636 aa	Predicted RBP	4.87	□□□□□ -1.63
ARP4	YJL081C	SRO9	P25567	434 aa	Known RBP	4.87	□□□□□ -1.63
ARP4	YJL081C	SEN54	Q02825	467 aa	Predicted RBP	4.87	□□□□□ -1.63
ARP4	YJL081C	YDL177C	Q12257	170 aa		4.87	□□□□□ -1.63
ARP4	YJL081C	PIC2	P40035	300 aa		4.86	□□□□□ -1.63
ARP4	YJL081C	REV3	P14284	1504 aa		4.86	□□□□□ -1.63
ARP4	YJL081C	AFG2	P32794	780 aa		4.85	□□□□□ -1.63
ARP4	YJL081C	EST2	Q06163	884 aa		4.85	□□□□□ -1.63
ARP4	YJL081C	PRP6	P19735	899 aa	Predicted RBP	4.84	□□□□□ -1.63
ARP4	YJL081C	YSC84	P32793	468 aa		4.84	□□□□□ -1.63
ARP4	YJL081C	ETP1	P38748	585 aa	Known RBP	4.84	□□□□□ -1.63
ARP4	YJL081C	MRPL22	P53881	309 aa		4.84	□□□□□ -1.63
ARP4	YJL081C	TAF13	P11747	167 aa		4.83	□□□□□ -1.64
ARP4	YJL081C	AIM26	P32858	118 aa		4.83	□□□□□ -1.64
ARP4	YJL081C	THI80	P35202	319 aa		4.83	□□□□□ -1.64
ARP4	YJL081C	FOL2	P51601	243 aa	Known RBP	4.83	□□□□□ -1.64
ARP4	YJL081C	YGR122W	P53272	402 aa		4.83	□□□□□ -1.64
ARP4	YJL081C	MCD1	Q12158	566 aa		4.83	□□□□□ -1.64
ARP4	YJL081C	SIN3	P22579	1536 aa		4.83	□□□□□ -1.64
ARP4	YJL081C	PRE9	P23638	258 aa	Known RBP	4.82	□□□□□ -1.64
ARP4	YJL081C	TAF7	Q05021	590 aa		4.82	□□□□□ -1.64
ARP4	YJL081C	RSC58	Q07979	502 aa		4.82	□□□□□ -1.64
ARP4	YJL081C	ESC8	Q08119	714 aa		4.82	□□□□□ -1.64
ARP4	YJL081C	NBA1	Q08229	501 aa	Known RBP	4.82	□□□□□ -1.64
ARP4	YJL081C	DED1	P06634	604 aa	Known RBP	4.81	□□□□□ -1.64
ARP4	YJL081C	YCR015C	P25616	317 aa		4.81	□□□□□ -1.64
ARP4	YJL081C	KIP1	P28742	1111 aa		4.81	□□□□□ -1.64
ARP4	YJL081C	AIM3	P38266	947 aa	Known RBP	4.81	□□□□□ -1.64
ARP4	YJL081C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.81	□□□□□ -1.64	RIP-Chip
ARP4	YJL081C	PTC5	Q12511	572 aa		4.81	□□□□□ -1.64
ARP4	YJL081C	CHD1	P32657	1468 aa		4.81	□□□□□ -1.64
ARP4	YJL081C	SSK2	P53599	1579 aa		4.81	□□□□□ -1.64
ARP4	YJL081C	SLD2	P34252	453 aa		4.81	□□□□□ -1.64
ARP4	YJL081C	ALG3	P38179	458 aa		4.81	□□□□□ -1.64
ARP4	YJL081C	MRPS18	P42847	217 aa		4.81	□□□□□ -1.64
ARP4	YJL081C	SNO2	P53823	222 aa		4.81	□□□□□ -1.64
ARP4	YJL081C	HDA2	Q06629	674 aa		4.81	□□□□□ -1.64
ARP4	YJL081C	MMS22	Q06164	1454 aa		4.8	□□□□□ -1.64
ARP4	YJL081C	TAF2	P23255	1407 aa		4.8	□□□□□ -1.64
ARP4	YJL081C	THO2	P53552	1597 aa	Known RBP	4.8	□□□□□ -1.64
ARP4	YJL081C	COQ4	O13525	335 aa		4.8	□□□□□ -1.64
ARP4	YJL081C	YKL222C	P35995	705 aa		4.8	□□□□□ -1.64
ARP4	YJL081C	RIM8	P53179	542 aa		4.8	□□□□□ -1.64
ARP4	YJL081C	RCL1	Q08096	367 aa	Predicted RBP	4.8	□□□□□ -1.64
ARP4	YJL081C	RAD2	P07276	1031 aa		4.79	□□□□□ -1.64
ARP4	YJL081C	SPS1	P08458	490 aa		4.79	□□□□□ -1.64
ARP4	YJL081C	CCZ1	P38273	704 aa		4.79	□□□□□ -1.64
ARP4	YJL081C	GPB2	P39717	880 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 28.1 ms