RNA–Protein interactions for RNA: YHR099W

TRA1, Transcript of Subunit of SAGA and NuA4 histone acetyltransferase complexes, yeastyeast

Gene TRA1, Length 11,235 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRA1YHR099W TLG2Q08144 397 aa2.61□□□□□ -1.99
TRA1YHR099W CHS5Q12114 671 aaKnown RBP2.61□□□□□ -1.99
TRA1YHR099W RNP1P32385 249 aa2.61□□□□□ -1.99
TRA1YHR099W COY1P34237 679 aa2.61□□□□□ -1.99
TRA1YHR099W IKI3Q06706 1349 aaKnown RBP2.61□□□□□ -1.99
TRA1YHR099W VPS51P36116 164 aa2.61□□□□□ -1.99
TRA1YHR099W CAF4P36130 643 aa2.61□□□□□ -1.99
TRA1YHR099W ELP2P42935 788 aa2.61□□□□□ -1.99
TRA1YHR099W MRK1P50873 501 aa2.61□□□□□ -1.99
TRA1YHR099W HUA2Q12134 243 aa2.61□□□□□ -1.99
TRA1YHR099W PEP7P32609 515 aa2.61□□□□□ -1.99
TRA1YHR099W CTF4Q01454 927 aa2.61□□□□□ -1.99
TRA1YHR099W SLP1Q12232 587 aa2.61□□□□□ -1.99
TRA1YHR099W SFI1Q12369 946 aa2.61□□□□□ -1.99
TRA1YHR099W TUF1P02992 437 aaKnown RBP2.61□□□□□ -1.99
TRA1YHR099W RAD6P06104 172 aa2.61□□□□□ -1.99
TRA1YHR099W BEM3P32873 1128 aa2.61□□□□□ -1.99
TRA1YHR099W UIP5P36137 443 aa2.61□□□□□ -1.99
TRA1YHR099W SSZ1P38788 538 aaKnown RBP2.61□□□□□ -1.99
TRA1YHR099W IRC5P43610 853 aa2.61□□□□□ -1.99
TRA1YHR099W SAP4P53036 818 aa2.61□□□□□ -1.99
TRA1YHR099W YLR455WQ06188 304 aa2.61□□□□□ -1.99
TRA1YHR099W BER1Q06688 274 aaKnown RBP2.61□□□□□ -1.99
TRA1YHR099W YVC1Q12324 675 aa2.61□□□□□ -1.99
TRA1YHR099W YOR093CQ12275 1648 aa2.61□□□□□ -1.99
TRA1YHR099W LAT1P12695 482 aaKnown RBP2.61□□□□□ -1.99
TRA1YHR099W NPL6P32832 435 aa2.61□□□□□ -1.99
TRA1YHR099W PDC2P32896 925 aa2.61□□□□□ -1.99
TRA1YHR099W YKR078WP36158 585 aaKnown RBP2.61□□□□□ -1.99
TRA1YHR099W GEF1P37020 779 aa2.61□□□□□ -1.99
TRA1YHR099W NDE2Q07500 545 aa2.61□□□□□ -1.99
TRA1YHR099W ENT1Q12518 454 aa2.61□□□□□ -1.99
TRA1YHR099W YKL075CP36083 450 aa2.61□□□□□ -1.99
TRA1YHR099W RPC17P47076 161 aa2.61□□□□□ -1.99
TRA1YHR099W NNF1P47149 201 aa2.61□□□□□ -1.99
TRA1YHR099W TSA2Q04120 196 aa2.61□□□□□ -1.99
TRA1YHR099W HDA2Q06629 674 aa2.61□□□□□ -1.99
TRA1YHR099W TCB1Q12466 1186 aa2.61□□□□□ -1.99
TRA1YHR099W SWI1P09547 1314 aa2.61□□□□□ -1.99
TRA1YHR099W EPS1P40557 701 aa2.61□□□□□ -1.99
TRA1YHR099W NOP13P53883 403 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
TRA1YHR099W TAF12Q03761 539 aa2.61□□□□□ -1.99
TRA1YHR099W CMR1Q12510 522 aaKnown RBP2.61□□□□□ -1.99
TRA1YHR099W SCP160P06105 1222 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99 RIP-Chip
TRA1YHR099W VPS3P23643 1011 aa2.61□□□□□ -1.99
TRA1YHR099W SHE3P38272 425 aaKnown RBP2.61□□□□□ -1.99
TRA1YHR099W RET3P53600 189 aa2.61□□□□□ -1.99
TRA1YHR099W YNL050CP53952 270 aa2.61□□□□□ -1.99
TRA1YHR099W MDM1Q01846 1127 aa2.61□□□□□ -1.99
TRA1YHR099W RIX7Q07844 837 aaKnown RBP2.61□□□□□ -1.99
TRA1YHR099W YOL057WQ08225 711 aa2.61□□□□□ -1.99
TRA1YHR099W UTP10P42945 1769 aaKnown RBP2.61□□□□□ -1.99
TRA1YHR099W HIR3P47171 1648 aa2.61□□□□□ -1.99
TRA1YHR099W HIS3P06633 220 aa2.6□□□□□ -1.99
TRA1YHR099W YBP1P38315 674 aa2.6□□□□□ -1.99
TRA1YHR099W RRM3P38766 723 aa2.6□□□□□ -1.99
TRA1YHR099W KHA1P40309 873 aa2.6□□□□□ -1.99
TRA1YHR099W FET4P40988 552 aa2.6□□□□□ -1.99
TRA1YHR099W HEH2Q03281 663 aa2.6□□□□□ -1.99
TRA1YHR099W GPI17Q04080 534 aa2.6□□□□□ -1.99
TRA1YHR099W DBP3P20447 523 aaKnown RBP2.6□□□□□ -1.99
TRA1YHR099W MGM1P32266 881 aa2.6□□□□□ -1.99
TRA1YHR099W MET18P40469 1032 aa2.6□□□□□ -1.99
TRA1YHR099W YFL034WP43564 1073 aa2.6□□□□□ -1.99
TRA1YHR099W TOF1P53840 1238 aa2.6□□□□□ -1.99
TRA1YHR099W YMR102CQ03177 834 aa2.6□□□□□ -1.99
TRA1YHR099W GYP5Q12344 894 aa2.6□□□□□ -1.99
TRA1YHR099W YKL100CP34248 587 aa2.6□□□□□ -1.99
TRA1YHR099W YJL070CP40361 888 aa2.6□□□□□ -1.99
TRA1YHR099W AIM21P40563 679 aa2.6□□□□□ -1.99
TRA1YHR099W BNI4P53858 892 aa2.6□□□□□ -1.99
TRA1YHR099W TFB2Q02939 513 aa2.6□□□□□ -1.99
TRA1YHR099W NPC2Q12408 173 aa2.6□□□□□ -1.99
TRA1YHR099W HMG2P12684 1045 aa2.6□□□□□ -1.99
TRA1YHR099W TBS1P38114 1094 aa2.6□□□□□ -1.99
TRA1YHR099W PTP3P40048 928 aa2.6□□□□□ -1.99
TRA1YHR099W CKB1P43639 278 aa2.6□□□□□ -1.99
TRA1YHR099W YGR111WP53265 400 aa2.6□□□□□ -1.99
TRA1YHR099W SLM2P53955 656 aa2.6□□□□□ -1.99
TRA1YHR099W SUI2P20459 304 aaKnown RBP2.6□□□□□ -1.99
TRA1YHR099W MRF1P30775 413 aaPredicted RBP2.6□□□□□ -1.99
TRA1YHR099W PEX6P33760 1030 aa2.6□□□□□ -1.99
TRA1YHR099W RPC25P35718 212 aa2.6□□□□□ -1.99
TRA1YHR099W YBL036CP38197 257 aa2.6□□□□□ -1.99
TRA1YHR099W ATG14P38270 344 aa2.6□□□□□ -1.99
TRA1YHR099W LRP1P38801 184 aaKnown RBP2.6□□□□□ -1.99
TRA1YHR099W FMS1P50264 508 aa2.6□□□□□ -1.99
TRA1YHR099W KAP120Q02932 1032 aa2.6□□□□□ -1.99
TRA1YHR099W OSW2Q12202 724 aa2.6□□□□□ -1.99
TRA1YHR099W RRP12Q12754 1228 aaKnown RBP2.6□□□□□ -1.99
TRA1YHR099W SMY1P32364 656 aaKnown RBP2.6□□□□□ -1.99
TRA1YHR099W IES1P43579 692 aa2.6□□□□□ -1.99
TRA1YHR099W SAM37P50110 327 aa2.6□□□□□ -1.99
TRA1YHR099W YLL032CQ07834 825 aaKnown RBP RIP-Chip data2.6□□□□□ -1.99not detected
TRA1YHR099W YOS9Q99220 542 aa2.6□□□□□ -1.99
TRA1YHR099W TMA22P47089 198 aaPredicted RBP2.6□□□□□ -1.99
TRA1YHR099W SNU71P53207 620 aaKnown RBP2.6□□□□□ -1.99
TRA1YHR099W PTA1Q01329 785 aaPredicted RBP2.6□□□□□ -1.99
TRA1YHR099W MSH6Q03834 1242 aa2.6□□□□□ -1.99
TRA1YHR099W SYF1Q04048 859 aaPredicted RBP2.6□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms