RNA–Protein interactions for RNA: YGR133W

PEX4, Transcript of Peroxisomal ubiquitin conjugating enzyme, yeast

Gene PEX4, Length 552 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PEX4	YGR133W	LAM1	P38851	1228 aa		4.27	□□□□□ -1.73
PEX4	YGR133W	BSC2	Q05611	235 aa		4.27	□□□□□ -1.73
PEX4	YGR133W	SGD1	Q06132	899 aa		4.27	□□□□□ -1.73
PEX4	YGR133W	QDR1	P40475	563 aa		4.26	□□□□□ -1.73
PEX4	YGR133W	YJL045W	P47052	634 aa		4.26	□□□□□ -1.73
PEX4	YGR133W	SUN4	P53616	420 aa		4.26	□□□□□ -1.73
PEX4	YGR133W	YNL011C	P53980	444 aa		4.26	□□□□□ -1.73
PEX4	YGR133W	RSA3	Q05942	220 aa	Known RBP	4.26	□□□□□ -1.73
PEX4	YGR133W	SPS1	P08458	490 aa		4.25	□□□□□ -1.73
PEX4	YGR133W	SRO9	P25567	434 aa	Known RBP	4.25	□□□□□ -1.73
PEX4	YGR133W	RSC58	Q07979	502 aa		4.25	□□□□□ -1.73
PEX4	YGR133W	HRK1	Q08732	759 aa	Known RBP	4.25	□□□□□ -1.73
PEX4	YGR133W	KOG1	P38873	1557 aa		4.24	□□□□□ -1.73
PEX4	YGR133W	ROT1	Q03691	256 aa		4.24	□□□□□ -1.73
PEX4	YGR133W	INP54	Q08227	384 aa	Known RBP	4.24	□□□□□ -1.73
PEX4	YGR133W	MNL2	Q12205	849 aa		4.23	□□□□□ -1.73
PEX4	YGR133W	SWR1	Q05471	1514 aa		4.22	□□□□□ -1.73
PEX4	YGR133W	CYC1	P00044	109 aa	Predicted RBP	4.22	□□□□□ -1.73
PEX4	YGR133W	HCM1	P25364	564 aa		4.22	□□□□□ -1.73
PEX4	YGR133W	HSE1	P38753	452 aa		4.22	□□□□□ -1.73
PEX4	YGR133W	RVS167	P39743	482 aa	Known RBP	4.22	□□□□□ -1.73
PEX4	YGR133W	MTR4	P47047	1073 aa	Known RBP	4.22	□□□□□ -1.73
PEX4	YGR133W	YNR063W	P53749	607 aa		4.22	□□□□□ -1.73
PEX4	YGR133W	DMA2	P53924	522 aa		4.22	□□□□□ -1.73
PEX4	YGR133W	UTP5	Q04177	643 aa	Known RBP	4.22	□□□□□ -1.73
PEX4	YGR133W	SHU2	P38957	223 aa		4.21	□□□□□ -1.74
PEX4	YGR133W	XKS1	P42826	600 aa		4.21	□□□□□ -1.74
PEX4	YGR133W	CDC55	Q00362	526 aa		4.21	□□□□□ -1.74
PEX4	YGR133W	PLB2	Q03674	706 aa		4.21	□□□□□ -1.74
PEX4	YGR133W	RCL1	Q08096	367 aa	Predicted RBP	4.21	□□□□□ -1.74
PEX4	YGR133W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.2	□□□□□ -1.74	not detected
PEX4	YGR133W	ENV11	P53246	860 aa		4.2	□□□□□ -1.74
PEX4	YGR133W	TRS120	Q04183	1289 aa		4.2	□□□□□ -1.74
PEX4	YGR133W	KAR5	Q04746	504 aa		4.2	□□□□□ -1.74
PEX4	YGR133W	DUS4	Q06063	367 aa		4.2	□□□□□ -1.74
PEX4	YGR133W	TMA10	Q06177	86 aa		4.2	□□□□□ -1.74
PEX4	YGR133W	NBA1	Q08229	501 aa	Known RBP	4.2	□□□□□ -1.74
PEX4	YGR133W	LAP2	Q10740	671 aa		4.2	□□□□□ -1.74
PEX4	YGR133W	RAD53	P22216	821 aa		4.19	□□□□□ -1.74
PEX4	YGR133W	YSC84	P32793	468 aa		4.19	□□□□□ -1.74
PEX4	YGR133W	AIM21	P40563	679 aa		4.19	□□□□□ -1.74
PEX4	YGR133W	MCM6	P53091	1017 aa	Known RBP	4.19	□□□□□ -1.74
PEX4	YGR133W	CTF4	Q01454	927 aa		4.19	□□□□□ -1.74
PEX4	YGR133W	QNS1	P38795	714 aa	Known RBP	4.18	□□□□□ -1.74
PEX4	YGR133W	NTO1	Q12311	748 aa		4.18	□□□□□ -1.74
PEX4	YGR133W	LST4	P34239	828 aa		4.17	□□□□□ -1.74
PEX4	YGR133W	PHO23	P50947	330 aa		4.17	□□□□□ -1.74
PEX4	YGR133W	SPO21	Q12411	609 aa		4.17	□□□□□ -1.74
PEX4	YGR133W	MSH3	P25336	1018 aa		4.16	□□□□□ -1.74
PEX4	YGR133W	CDC20	P26309	610 aa		4.16	□□□□□ -1.74
PEX4	YGR133W	DOM34	P33309	386 aa		4.16	□□□□□ -1.74
PEX4	YGR133W	ATG14	P38270	344 aa		4.16	□□□□□ -1.74
PEX4	YGR133W	CHS7	P38843	316 aa		4.16	□□□□□ -1.74
PEX4	YGR133W	HNT2	P49775	206 aa		4.16	□□□□□ -1.74
PEX4	YGR133W	NOG1	Q02892	647 aa	Known RBP	4.16	□□□□□ -1.74
PEX4	YGR133W	PMI40	P29952	429 aa	Known RBP	4.15	□□□□□ -1.75
PEX4	YGR133W	SEC26	P41810	973 aa	Known RBP	4.15	□□□□□ -1.75
PEX4	YGR133W	MNN10	P50108	393 aa	Known RBP	4.15	□□□□□ -1.75
PEX4	YGR133W	ATG1	P53104	897 aa		4.15	□□□□□ -1.75
PEX4	YGR133W	PEX13	P80667	386 aa		4.15	□□□□□ -1.75
PEX4	YGR133W	COQ4	O13525	335 aa		4.14	□□□□□ -1.75
PEX4	YGR133W	ACK1	Q07622	623 aa	Predicted RBP	4.14	□□□□□ -1.75
PEX4	YGR133W	GAL10	P04397	699 aa		4.13	□□□□□ -1.75
PEX4	YGR133W	STE11	P23561	717 aa		4.13	□□□□□ -1.75
PEX4	YGR133W	ACF4	P47129	309 aa		4.13	□□□□□ -1.75
PEX4	YGR133W	RXT3	Q07458	294 aa		4.13	□□□□□ -1.75
PEX4	YGR133W	NOC3	Q07896	663 aa	Predicted RBP	4.13	□□□□□ -1.75
PEX4	YGR133W	TY1B-DR4	Q07793	1604 aa		4.13	□□□□□ -1.75
PEX4	YGR133W	CMP2	P14747	604 aa		4.12	□□□□□ -1.75
PEX4	YGR133W	SRM1	P21827	482 aa		4.12	□□□□□ -1.75
PEX4	YGR133W	CCZ1	P38273	704 aa		4.12	□□□□□ -1.75
PEX4	YGR133W	GPB2	P39717	880 aa		4.12	□□□□□ -1.75
PEX4	YGR133W	RSB1	Q08417	382 aa		4.12	□□□□□ -1.75
PEX4	YGR133W	GPB1	Q08886	897 aa		4.12	□□□□□ -1.75
PEX4	YGR133W	KIN4	Q01919	800 aa		4.11	□□□□□ -1.75
PEX4	YGR133W	SPA2	P23201	1466 aa	Known RBP	4.11	□□□□□ -1.75
PEX4	YGR133W	CDC6	P09119	513 aa		4.1	□□□□□ -1.75
PEX4	YGR133W	KIP1	P28742	1111 aa		4.1	□□□□□ -1.75
PEX4	YGR133W	VPS53	P47061	822 aa		4.1	□□□□□ -1.75
PEX4	YGR133W	YCS4	Q06156	1176 aa		4.1	□□□□□ -1.75
PEX4	YGR133W	GPI13	Q07830	1017 aa		4.1	□□□□□ -1.75
PEX4	YGR133W	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
PEX4	YGR133W	VMA4	P22203	233 aa	Known RBP	4.09	□□□□□ -1.75
PEX4	YGR133W	UGA4	P32837	571 aa		4.09	□□□□□ -1.75
PEX4	YGR133W	BAP2	P38084	609 aa		4.09	□□□□□ -1.75
PEX4	YGR133W	YAP6	Q03935	383 aa		4.09	□□□□□ -1.75
PEX4	YGR133W	RSM26	P47141	266 aa		4.08	□□□□□ -1.76
PEX4	YGR133W	TNA1	P53322	534 aa		4.08	□□□□□ -1.76
PEX4	YGR133W	HOS3	Q02959	697 aa	Known RBP	4.08	□□□□□ -1.76
PEX4	YGR133W	RSM24	Q03976	319 aa		4.08	□□□□□ -1.76
PEX4	YGR133W	PMA1	P05030	918 aa	Known RBP	4.07	□□□□□ -1.76
PEX4	YGR133W	ADD66	P36040	267 aa		4.07	□□□□□ -1.76
PEX4	YGR133W	MSS4	P38994	779 aa		4.07	□□□□□ -1.76
PEX4	YGR133W	PIK1	P39104	1066 aa		4.07	□□□□□ -1.76
PEX4	YGR133W	GTF1	P53260	183 aa	Predicted RBP	4.07	□□□□□ -1.76
PEX4	YGR133W	TCB3	Q03640	1545 aa	Known RBP	4.06	□□□□□ -1.76
PEX4	YGR133W	SNF5	P18480	905 aa		4.06	□□□□□ -1.76
PEX4	YGR133W	RKM2	Q03942	479 aa		4.06	□□□□□ -1.76
PEX4	YGR133W	YLR224W	Q05947	369 aa		4.06	□□□□□ -1.76
PEX4	YGR133W	URN1	Q06525	465 aa	Known RBP	4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 73.9 ms