RNA–Protein interactions for RNA: YDL085W

NDE2, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE2, Length 1,638 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE2YDL085W PTC5Q12511 572 aa8.73□□□□□ -1.01
NDE2YDL085W PRI1P10363 409 aa8.72□□□□□ -1.01
NDE2YDL085W SPB4P25808 606 aaPredicted RBP8.72□□□□□ -1.01
NDE2YDL085W PCH2P38126 564 aa8.72□□□□□ -1.01
NDE2YDL085W ALF1P53904 254 aa8.72□□□□□ -1.01
NDE2YDL085W RPS9BP05755 195 aaKnown RBP8.72□□□□□ -1.01
NDE2YDL085W CDC37P06101 506 aaKnown RBP8.72□□□□□ -1.01
NDE2YDL085W PDC1P06169 563 aaKnown RBP8.72□□□□□ -1.01
NDE2YDL085W MAK11P20484 414 aaKnown RBP8.72□□□□□ -1.01
NDE2YDL085W UBC1P21734 215 aaKnown RBP8.72□□□□□ -1.01
NDE2YDL085W MSH3P25336 1018 aa8.72□□□□□ -1.01
NDE2YDL085W MSN5P52918 1224 aa8.72□□□□□ -1.01
NDE2YDL085W RET3P53600 189 aa8.72□□□□□ -1.01
NDE2YDL085W CSM3Q04659 317 aa8.72□□□□□ -1.01
NDE2YDL085W DSE3Q08729 430 aa8.72□□□□□ -1.01
NDE2YDL085W PCL8Q08966 492 aa8.72□□□□□ -1.01
NDE2YDL085W FLO1P32768 1537 aa8.71□□□□□ -1.01
NDE2YDL085W DPB3P27344 201 aa8.71□□□□□ -1.02
NDE2YDL085W DEP1P31385 405 aa8.71□□□□□ -1.02
NDE2YDL085W RRP1P35178 278 aaPredicted RBP8.71□□□□□ -1.02
NDE2YDL085W VTC2P43585 828 aa8.71□□□□□ -1.02
NDE2YDL085W FOL1P53848 824 aa8.71□□□□□ -1.02
NDE2YDL085W VPS38Q05919 439 aa8.71□□□□□ -1.02
NDE2YDL085W AFT2Q08957 416 aa8.71□□□□□ -1.02
NDE2YDL085W MCM16Q12262 181 aa8.71□□□□□ -1.02
NDE2YDL085W FOB1O13329 566 aa8.7□□□□□ -1.02
NDE2YDL085W PRO3P32263 286 aaKnown RBP8.7□□□□□ -1.02
NDE2YDL085W YKU70P32807 602 aa8.7□□□□□ -1.02
NDE2YDL085W EFM2P38347 419 aa8.7□□□□□ -1.02
NDE2YDL085W NDC80P40460 691 aa8.7□□□□□ -1.02
NDE2YDL085W MAL13P53338 473 aa8.7□□□□□ -1.02
NDE2YDL085W MDM1Q01846 1127 aa8.7□□□□□ -1.02
NDE2YDL085W MRS2Q01926 470 aa8.7□□□□□ -1.02
NDE2YDL085W GIS4Q04233 774 aa8.7□□□□□ -1.02
NDE2YDL085W RBA50Q04418 439 aa8.7□□□□□ -1.02
NDE2YDL085W RRG1Q12167 365 aaPredicted RBP8.7□□□□□ -1.02
NDE2YDL085W SRM1P21827 482 aa8.69□□□□□ -1.02
NDE2YDL085W PRE8P23639 250 aa8.69□□□□□ -1.02
NDE2YDL085W YEL043WP32618 956 aa8.69□□□□□ -1.02
NDE2YDL085W DEF1P35732 738 aaKnown RBP8.69□□□□□ -1.02
NDE2YDL085W PXL1P36166 706 aa8.69□□□□□ -1.02
NDE2YDL085W CTM1P38818 585 aa8.69□□□□□ -1.02
NDE2YDL085W STT3P39007 718 aaKnown RBP8.69□□□□□ -1.02
NDE2YDL085W GSM1P42950 618 aa8.69□□□□□ -1.02
NDE2YDL085W ENV11P53246 860 aa8.69□□□□□ -1.02
NDE2YDL085W CAF130P53280 1122 aaPredicted RBP8.69□□□□□ -1.02
NDE2YDL085W RNT1Q02555 471 aa8.69□□□□□ -1.02
NDE2YDL085W AAD16Q02895 342 aa8.69□□□□□ -1.02
NDE2YDL085W VPS30Q02948 557 aa8.69□□□□□ -1.02
NDE2YDL085W SLK19Q08581 821 aaKnown RBP8.69□□□□□ -1.02
NDE2YDL085W YKL068W-AQ3E826 78 aa8.69□□□□□ -1.02
NDE2YDL085W CTT1P06115 562 aa8.69□□□□□ -1.02
NDE2YDL085W STI1P15705 589 aaKnown RBP RIP-Chip data8.69□□□□□ -1.02not detected
NDE2YDL085W CLB1P24868 471 aa8.69□□□□□ -1.02
NDE2YDL085W RRP43P25359 394 aaPredicted RBP8.69□□□□□ -1.02
NDE2YDL085W MVP1P40959 511 aaKnown RBP8.69□□□□□ -1.02
NDE2YDL085W THI6P41835 540 aa8.69□□□□□ -1.02
NDE2YDL085W SDA1P53313 767 aaKnown RBP8.69□□□□□ -1.02
NDE2YDL085W BNI5P53890 448 aaKnown RBP8.69□□□□□ -1.02
NDE2YDL085W TRS120Q04183 1289 aa8.69□□□□□ -1.02
NDE2YDL085W PSR2Q07949 397 aa8.69□□□□□ -1.02
NDE2YDL085W TLG2Q08144 397 aa8.69□□□□□ -1.02
NDE2YDL085W NUC1P08466 329 aa8.68□□□□□ -1.02
NDE2YDL085W REI1P38344 393 aaPredicted RBP8.68□□□□□ -1.02
NDE2YDL085W SPT8P38915 602 aa8.68□□□□□ -1.02
NDE2YDL085W LYS14P40971 790 aa8.68□□□□□ -1.02
NDE2YDL085W SET4P42948 560 aa8.68□□□□□ -1.02
NDE2YDL085W YGR237CP50089 785 aa8.68□□□□□ -1.02
NDE2YDL085W RRB1Q04225 511 aaKnown RBP8.68□□□□□ -1.02
NDE2YDL085W SKG3Q06315 1026 aa8.68□□□□□ -1.02
NDE2YDL085W SPP382Q06411 708 aaPredicted RBP8.68□□□□□ -1.02
NDE2YDL085W CKA2P19454 339 aa8.67□□□□□ -1.02
NDE2YDL085W SRO9P25567 434 aaKnown RBP8.67□□□□□ -1.02
NDE2YDL085W STO1P34160 861 aaKnown RBP8.67□□□□□ -1.02
NDE2YDL085W RTT107P38850 1070 aa8.67□□□□□ -1.02
NDE2YDL085W VPS45P38932 577 aa8.67□□□□□ -1.02
NDE2YDL085W UBA2P52488 636 aa8.67□□□□□ -1.02
NDE2YDL085W LSB1P53281 241 aa8.67□□□□□ -1.02
NDE2YDL085W NSG2P53898 299 aa8.67□□□□□ -1.02
NDE2YDL085W EBS1Q03466 884 aaKnown RBP8.67□□□□□ -1.02
NDE2YDL085W CRF1Q04930 467 aa8.67□□□□□ -1.02
NDE2YDL085W SML1Q04964 104 aa8.67□□□□□ -1.02
NDE2YDL085W SMD2Q06217 110 aaKnown RBP8.67□□□□□ -1.02
NDE2YDL085W YOL098CQ12496 1037 aa8.67□□□□□ -1.02
NDE2YDL085W SEC23P15303 768 aaKnown RBP8.66□□□□□ -1.02
NDE2YDL085W SPO11P23179 398 aa8.66□□□□□ -1.02
NDE2YDL085W MSH1P25846 959 aa8.66□□□□□ -1.02
NDE2YDL085W RPS7AP26786 190 aaKnown RBP8.66□□□□□ -1.02
NDE2YDL085W SEC65P29478 273 aa8.66□□□□□ -1.02
NDE2YDL085W YET1P35723 206 aa8.66□□□□□ -1.02
NDE2YDL085W VPS41P38959 992 aa8.66□□□□□ -1.02
NDE2YDL085W CCT4P39078 528 aaKnown RBP8.66□□□□□ -1.02
NDE2YDL085W DSE4P53753 1117 aa8.66□□□□□ -1.02
NDE2YDL085W DPL1Q05567 589 aa8.66□□□□□ -1.02
NDE2YDL085W VIP1Q06685 1146 aaKnown RBP8.66□□□□□ -1.02
NDE2YDL085W ATG9Q12142 997 aa8.66□□□□□ -1.02
NDE2YDL085W TUF1P02992 437 aaKnown RBP8.65□□□□□ -1.02
NDE2YDL085W RPL8AP17076 256 aaKnown RBP8.65□□□□□ -1.02
NDE2YDL085W SRP54P20424 541 aaKnown RBP8.65□□□□□ -1.02
NDE2YDL085W RPO26P20435 155 aa8.65□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 100.6 ms