RNA–Protein interactions for RNA: RDN5-3

RDN5-3, Transcript of Variant 5S ribosomal RNA (5S rRNA) gene, yeastyeast

Gene RDN5-3, Length 119 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN5-3RDN5-3 MSH1P25846 959 aa7.45□□□□□ -1.22
RDN5-3RDN5-3 FRD1P32614 470 aaKnown RBP7.45□□□□□ -1.22
RDN5-3RDN5-3 SHM1P37292 490 aaPredicted RBP7.45□□□□□ -1.22
RDN5-3RDN5-3 SEC9P40357 651 aa7.45□□□□□ -1.22
RDN5-3RDN5-3 THI6P41835 540 aa7.45□□□□□ -1.22
RDN5-3RDN5-3 VTC2P43585 828 aa7.45□□□□□ -1.22
RDN5-3RDN5-3 JJJ2P46997 583 aa7.45□□□□□ -1.22
RDN5-3RDN5-3 RET3P53600 189 aa7.45□□□□□ -1.22
RDN5-3RDN5-3 BOP3P53958 396 aa7.45□□□□□ -1.22
RDN5-3RDN5-3 SAS4Q04003 481 aa7.45□□□□□ -1.22
RDN5-3RDN5-3 UTP5Q04177 643 aaKnown RBP7.45□□□□□ -1.22
RDN5-3RDN5-3 SPP382Q06411 708 aaPredicted RBP7.45□□□□□ -1.22
RDN5-3RDN5-3 VAC14Q06708 880 aa7.45□□□□□ -1.22
RDN5-3RDN5-3 YOL098CQ12496 1037 aa7.45□□□□□ -1.22
RDN5-3RDN5-3 FLO1P32768 1537 aa7.45□□□□□ -1.22
RDN5-3RDN5-3 PMD1P32634 1753 aa7.44□□□□□ -1.22
RDN5-3RDN5-3 FOB1O13329 566 aa7.44□□□□□ -1.22
RDN5-3RDN5-3 CIT1P00890 479 aa7.44□□□□□ -1.22
RDN5-3RDN5-3 MAK11P20484 414 aaKnown RBP7.44□□□□□ -1.22
RDN5-3RDN5-3 DEP1P31385 405 aa7.44□□□□□ -1.22
RDN5-3RDN5-3 NFU1P32860 256 aa7.44□□□□□ -1.22
RDN5-3RDN5-3 RPT3P33298 428 aaKnown RBP7.44□□□□□ -1.22
RDN5-3RDN5-3 BYE1P36106 594 aa7.44□□□□□ -1.22
RDN5-3RDN5-3 MIP6P38760 659 aaKnown RBP7.44□□□□□ -1.22
RDN5-3RDN5-3 STT3P39007 718 aaKnown RBP7.44□□□□□ -1.22
RDN5-3RDN5-3 CCT3P39077 534 aaKnown RBP7.44□□□□□ -1.22
RDN5-3RDN5-3 VID27P40157 782 aa7.44□□□□□ -1.22
RDN5-3RDN5-3 SHQ1P40486 507 aaPredicted RBP7.44□□□□□ -1.22
RDN5-3RDN5-3 AIP1P46680 615 aaKnown RBP7.44□□□□□ -1.22
RDN5-3RDN5-3 YGR153WP48238 217 aa7.44□□□□□ -1.22
RDN5-3RDN5-3 RNT1Q02555 471 aa7.44□□□□□ -1.22
RDN5-3RDN5-3 YLR287CQ05881 355 aa7.44□□□□□ -1.22
RDN5-3RDN5-3 IRC3Q06683 689 aa7.44□□□□□ -1.22
RDN5-3RDN5-3 PSR2Q07949 397 aa7.44□□□□□ -1.22
RDN5-3RDN5-3 OSH2Q12451 1283 aa7.44□□□□□ -1.22
RDN5-3RDN5-3 RPS6AP0CX37 236 aaKnown RBP7.43□□□□□ -1.22
RDN5-3RDN5-3 RPS6BP0CX38 236 aaPredicted RBP7.43□□□□□ -1.22
RDN5-3RDN5-3 MTF2P10849 440 aa7.43□□□□□ -1.22
RDN5-3RDN5-3 SRB4P32569 687 aa7.43□□□□□ -1.22
RDN5-3RDN5-3 SAS3P34218 831 aa7.43□□□□□ -1.22
RDN5-3RDN5-3 VFA1P40080 203 aa7.43□□□□□ -1.22
RDN5-3RDN5-3 ATG3P40344 310 aa7.43□□□□□ -1.22
RDN5-3RDN5-3 EFM4P40516 257 aa7.43□□□□□ -1.22
RDN5-3RDN5-3 RRB1Q04225 511 aaKnown RBP7.43□□□□□ -1.22
RDN5-3RDN5-3 ATG23Q06671 453 aa7.43□□□□□ -1.22
RDN5-3RDN5-3 TLG2Q08144 397 aa7.43□□□□□ -1.22
RDN5-3RDN5-3 PLP2Q12017 286 aa7.43□□□□□ -1.22
RDN5-3RDN5-3 WRS1Q12109 432 aaKnown RBP7.43□□□□□ -1.22
RDN5-3RDN5-3 RRP6Q12149 733 aaKnown RBP7.43□□□□□ -1.22
RDN5-3RDN5-3 SPB4P25808 606 aaPredicted RBP7.42□□□□□ -1.22
RDN5-3RDN5-3 RPL8BP29453 256 aaKnown RBP7.42□□□□□ -1.22
RDN5-3RDN5-3 PRO3P32263 286 aaKnown RBP7.42□□□□□ -1.22
RDN5-3RDN5-3 CNS1P33313 385 aa7.42□□□□□ -1.22
RDN5-3RDN5-3 MUD2P36084 527 aaKnown RBP7.42□□□□□ -1.22
RDN5-3RDN5-3 PFF1P38244 976 aa7.42□□□□□ -1.22
RDN5-3RDN5-3 RPG1P38249 964 aaKnown RBP7.42□□□□□ -1.22
RDN5-3RDN5-3 TOS1P38288 455 aa7.42□□□□□ -1.22
RDN5-3RDN5-3 VPS41P38959 992 aa7.42□□□□□ -1.22
RDN5-3RDN5-3 VPS8P39702 1274 aa7.42□□□□□ -1.22
RDN5-3RDN5-3 APL6P46682 809 aa7.42□□□□□ -1.22
RDN5-3RDN5-3 UBA2P52488 636 aa7.42□□□□□ -1.22
RDN5-3RDN5-3 LSC2P53312 427 aa7.42□□□□□ -1.22
RDN5-3RDN5-3 GIS4Q04233 774 aa7.42□□□□□ -1.22
RDN5-3RDN5-3 YMR074CQ04773 145 aa7.42□□□□□ -1.22
RDN5-3RDN5-3 DSE3Q08729 430 aa7.42□□□□□ -1.22
RDN5-3RDN5-3 STI1P15705 589 aaKnown RBP RIP-Chip data7.41□□□□□ -1.22not detected
RDN5-3RDN5-3 CKA2P19454 339 aa7.41□□□□□ -1.22
RDN5-3RDN5-3 CKI1P20485 582 aa7.41□□□□□ -1.22
RDN5-3RDN5-3 CLB1P24868 471 aa7.41□□□□□ -1.22
RDN5-3RDN5-3 SEC20P28791 383 aa7.41□□□□□ -1.22
RDN5-3RDN5-3 TIF4632P39936 914 aaKnown RBP7.41□□□□□ -1.22
RDN5-3RDN5-3 YAP5P40574 245 aa7.41□□□□□ -1.22
RDN5-3RDN5-3 YFR006WP43590 535 aa7.41□□□□□ -1.22
RDN5-3RDN5-3 HFM1P51979 1187 aa7.41□□□□□ -1.22
RDN5-3RDN5-3 HPC2Q01448 625 aa7.41□□□□□ -1.22
RDN5-3RDN5-3 VTC3Q02725 835 aa7.41□□□□□ -1.22
RDN5-3RDN5-3 TRS120Q04183 1289 aa7.41□□□□□ -1.22
RDN5-3RDN5-3 OPY2Q06810 360 aa7.41□□□□□ -1.22
RDN5-3RDN5-3 RIX7Q07844 837 aaKnown RBP7.41□□□□□ -1.22
RDN5-3RDN5-3 YAP7Q08182 245 aa7.41□□□□□ -1.22
RDN5-3RDN5-3 SLK19Q08581 821 aaKnown RBP7.41□□□□□ -1.22
RDN5-3RDN5-3 OM45P16547 393 aa7.4□□□□□ -1.22
RDN5-3RDN5-3 SPO12P17123 173 aa7.4□□□□□ -1.22
RDN5-3RDN5-3 RAD57P25301 460 aa7.4□□□□□ -1.22
RDN5-3RDN5-3 PSO2P30620 661 aa7.4□□□□□ -1.22
RDN5-3RDN5-3 HXT1P32465 570 aa7.4□□□□□ -1.22
RDN5-3RDN5-3 ERG7P38604 731 aa7.4□□□□□ -1.22
RDN5-3RDN5-3 SMC2P38989 1170 aaKnown RBP7.4□□□□□ -1.22
RDN5-3RDN5-3 MDM1Q01846 1127 aa7.4□□□□□ -1.22
RDN5-3RDN5-3 NUR1Q12066 484 aa7.4□□□□□ -1.22
RDN5-3RDN5-3 TOP1P04786 769 aa7.39□□□□□ -1.23
RDN5-3RDN5-3 SRP54P20424 541 aaKnown RBP7.39□□□□□ -1.23
RDN5-3RDN5-3 UGA2P38067 497 aa7.39□□□□□ -1.23
RDN5-3RDN5-3 HUL4P40985 892 aa7.39□□□□□ -1.23
RDN5-3RDN5-3 SDA1P53313 767 aaKnown RBP7.39□□□□□ -1.23
RDN5-3RDN5-3 BNI5P53890 448 aaKnown RBP7.39□□□□□ -1.23
RDN5-3RDN5-3 UME1Q03010 460 aa7.39□□□□□ -1.23
RDN5-3RDN5-3 ERO1Q03103 563 aa7.39□□□□□ -1.23
RDN5-3RDN5-3 NGL3Q03210 505 aa7.39□□□□□ -1.23
RDN5-3RDN5-3 CSM3Q04659 317 aa7.39□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms