RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 PIP4K2BP78356 416 aa5.64□□□□□ -1.51
LINC01048-201ENST00000414480 GUCA2AQ02747 115 aa5.64□□□□□ -1.51
LINC01048-201ENST00000414480 PTCRAQ6ISU1 281 aaPredicted RBP5.64□□□□□ -1.51
LINC01048-201ENST00000414480 ZFP42Q96MM3 310 aa5.64□□□□□ -1.51
LINC01048-201ENST00000414480 RAPGEF2Q9Y4G8 1499 aa5.64□□□□□ -1.51
LINC01048-201ENST00000414480 IGSF3O75054 1194 aa5.63□□□□□ -1.51
LINC01048-201ENST00000414480 CCNYL3P0C7X3 344 aa5.63□□□□□ -1.51
LINC01048-201ENST00000414480 FGD1P98174 961 aa5.63□□□□□ -1.51
LINC01048-201ENST00000414480 SYMPKQ92797 1274 aaKnown RBP5.63□□□□□ -1.51
LINC01048-201ENST00000414480 BCCIPQ9P287 314 aaKnown RBP eCLIP5.63□□□□□ -1.51
LINC01048-201ENST00000414480 TCOF1Q13428 1488 aaKnown RBP5.63□□□□□ -1.51
LINC01048-201ENST00000414480 SRCAPQ6ZRS2 3230 aa5.63□□□□□ -1.51
LINC01048-201ENST00000414480 C3P01024 1663 aa5.63□□□□□ -1.51
LINC01048-201ENST00000414480 PLEKHG3A1L390 1219 aa5.62□□□□□ -1.51
LINC01048-201ENST00000414480 IRF6O14896 467 aa5.62□□□□□ -1.51
LINC01048-201ENST00000414480 TOM1O60784 492 aa5.62□□□□□ -1.51
LINC01048-201ENST00000414480 VSIG8P0DPA2 414 aa5.62□□□□□ -1.51
LINC01048-201ENST00000414480 MS4A1P11836 297 aa5.62□□□□□ -1.51
LINC01048-201ENST00000414480 SCARF1Q14162 830 aa5.62□□□□□ -1.51
LINC01048-201ENST00000414480 NUTM1Q86Y26 1132 aa5.62□□□□□ -1.51
LINC01048-201ENST00000414480 GPCPD1Q9NPB8 672 aa5.62□□□□□ -1.51
LINC01048-201ENST00000414480 TLL2Q9Y6L7 1015 aa5.62□□□□□ -1.51
LINC01048-201ENST00000414480 CLSPNQ9HAW4 1339 aa5.62□□□□□ -1.51
LINC01048-201ENST00000414480 GOLGA3Q08378 1498 aa5.62□□□□□ -1.51
LINC01048-201ENST00000414480 CLCN1P35523 988 aa5.61□□□□□ -1.51
LINC01048-201ENST00000414480 PLA2R1Q13018 1463 aa5.61□□□□□ -1.51
LINC01048-201ENST00000414480 NNTQ13423 1086 aa5.61□□□□□ -1.51
LINC01048-201ENST00000414480 PTPRNQ16849 979 aa5.61□□□□□ -1.51
LINC01048-201ENST00000414480 MRPL14Q6P1L8 145 aaKnown RBP5.61□□□□□ -1.51
LINC01048-201ENST00000414480 MINK1Q8N4C8 1332 aaPredicted RBP5.61□□□□□ -1.51
LINC01048-201ENST00000414480 MPNDQ8N594 471 aa5.61□□□□□ -1.51
LINC01048-201ENST00000414480 UNC93B1Q9H1C4 597 aa5.61□□□□□ -1.51
LINC01048-201ENST00000414480 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.6□□□□□ -1.51
LINC01048-201ENST00000414480 SCAPERQ9BY12 1400 aa5.6□□□□□ -1.51
LINC01048-201ENST00000414480 A0A0U1RQG5 324 aaPredicted RBP5.6□□□□□ -1.51
LINC01048-201ENST00000414480 C6orf229H3BNL8 230 aa5.6□□□□□ -1.51
LINC01048-201ENST00000414480 FDX1P10109 184 aa5.6□□□□□ -1.51
LINC01048-201ENST00000414480 VARSP26640 1264 aaKnown RBP5.6□□□□□ -1.51
LINC01048-201ENST00000414480 CCDC136Q96JN2 1154 aa5.6□□□□□ -1.51
LINC01048-201ENST00000414480 NAP1L5Q96NT1 182 aaPredicted RBP5.6□□□□□ -1.51
LINC01048-201ENST00000414480 FAM217BQ9NTX9 383 aaPredicted RBP5.6□□□□□ -1.51
LINC01048-201ENST00000414480 NPATQ14207 1427 aa5.59□□□□□ -1.51
LINC01048-201ENST00000414480 ADH1CP00326 375 aa5.59□□□□□ -1.51
LINC01048-201ENST00000414480 TIMP2P16035 220 aa5.59□□□□□ -1.51
LINC01048-201ENST00000414480 LINC01559Q495D7 138 aa5.59□□□□□ -1.51
LINC01048-201ENST00000414480 GLIPR1L2Q4G1C9 344 aa5.59□□□□□ -1.51
LINC01048-201ENST00000414480 ZNF511Q8NB15 262 aa5.59□□□□□ -1.51
LINC01048-201ENST00000414480 PUS7Q96PZ0 661 aaKnown RBP5.59□□□□□ -1.51
LINC01048-201ENST00000414480 EVA1BQ9NVM1 165 aa5.59□□□□□ -1.51
LINC01048-201ENST00000414480 CPS1P31327 1500 aa5.58□□□□□ -1.52
LINC01048-201ENST00000414480 NUP153P49790 1475 aaKnown RBP5.58□□□□□ -1.52
LINC01048-201ENST00000414480 WDR4P57081 412 aaKnown RBP5.58□□□□□ -1.52
LINC01048-201ENST00000414480 KCNH2Q12809 1159 aa5.58□□□□□ -1.52
LINC01048-201ENST00000414480 BAP1Q92560 729 aa5.58□□□□□ -1.52
LINC01048-201ENST00000414480 CCDC102AQ96A19 550 aa5.58□□□□□ -1.52
LINC01048-201ENST00000414480 PURBQ96QR8 312 aaKnown RBP5.58□□□□□ -1.52
LINC01048-201ENST00000414480 PCDHGC3Q9UN70 934 aa5.58□□□□□ -1.52
LINC01048-201ENST00000414480 CFAP74Q9C0B2 1584 aa5.58□□□□□ -1.52
LINC01048-201ENST00000414480 REREQ9P2R6 1566 aa5.58□□□□□ -1.52
LINC01048-201ENST00000414480 AGLP35573 1532 aa5.58□□□□□ -1.52
LINC01048-201ENST00000414480 SHANK2Q9UPX8 1470 aa5.58□□□□□ -1.52
LINC01048-201ENST00000414480 PTPRKQ15262 1439 aa5.57□□□□□ -1.52
LINC01048-201ENST00000414480 SETD1AO15047 1707 aaKnown RBP5.57□□□□□ -1.52
LINC01048-201ENST00000414480 KCNMA1Q12791 1236 aa5.57□□□□□ -1.52
LINC01048-201ENST00000414480 ANP32EQ9BTT0 268 aa5.57□□□□□ -1.52
LINC01048-201ENST00000414480 PLCH2O75038 1416 aa5.57□□□□□ -1.52
LINC01048-201ENST00000414480 KDM5CP41229 1560 aa5.56□□□□□ -1.52
LINC01048-201ENST00000414480 DIP2CQ9Y2E4 1556 aa5.56□□□□□ -1.52
LINC01048-201ENST00000414480 SUZ12Q15022 739 aaKnown RBP5.56□□□□□ -1.52
LINC01048-201ENST00000414480 DESI1Q6ICB0 168 aa5.56□□□□□ -1.52
LINC01048-201ENST00000414480 AFAP1Q8N556 730 aa5.56□□□□□ -1.52
LINC01048-201ENST00000414480 KRI1Q8N9T8 703 aaKnown RBP5.56□□□□□ -1.52
LINC01048-201ENST00000414480 FAM174AQ8TBP5 190 aa5.56□□□□□ -1.52
LINC01048-201ENST00000414480 ZMYM3Q14202 1370 aa5.55□□□□□ -1.52
LINC01048-201ENST00000414480 VWDEQ8N2E2 1590 aa5.55□□□□□ -1.52
LINC01048-201ENST00000414480 NEURL4Q96JN8 1562 aa5.55□□□□□ -1.52
LINC01048-201ENST00000414480 SOBPA7XYQ1 873 aa5.55□□□□□ -1.52
LINC01048-201ENST00000414480 ZNF142P52746 1687 aaPredicted RBP5.55□□□□□ -1.52
LINC01048-201ENST00000414480 CNTLNQ9NXG0 1405 aa5.55□□□□□ -1.52
LINC01048-201ENST00000414480 RAPGEF6Q8TEU7 1601 aa5.55□□□□□ -1.52
LINC01048-201ENST00000414480 CTTNBP2Q8WZ74 1663 aa5.54□□□□□ -1.52
LINC01048-201ENST00000414480 PLEKHD1A6NEE1 506 aa5.54□□□□□ -1.52
LINC01048-201ENST00000414480 SPDYE5A6NIY4 337 aa5.54□□□□□ -1.52
LINC01048-201ENST00000414480 MAN1A2O60476 641 aa5.54□□□□□ -1.52
LINC01048-201ENST00000414480 PRR7Q8TB68 274 aa5.54□□□□□ -1.52
LINC01048-201ENST00000414480 KLF16Q9BXK1 252 aaPredicted RBP5.54□□□□□ -1.52
LINC01048-201ENST00000414480 CEP170BQ9Y4F5 1589 aaPredicted RBP5.54□□□□□ -1.52
LINC01048-201ENST00000414480 MLH3Q9UHC1 1453 aa5.53□□□□□ -1.52
LINC01048-201ENST00000414480 ABCA6Q8N139 1617 aa5.53□□□□□ -1.52
LINC01048-201ENST00000414480 MYO3AQ8NEV4 1616 aa5.53□□□□□ -1.52
LINC01048-201ENST00000414480 MTMR2Q13614 643 aa5.53□□□□□ -1.52
LINC01048-201ENST00000414480 CDK15Q96Q40 435 aa5.53□□□□□ -1.52
LINC01048-201ENST00000414480 LRRC7Q96NW7 1537 aa5.53□□□□□ -1.52
LINC01048-201ENST00000414480 ZNF518AQ6AHZ1 1483 aa5.52□□□□□ -1.53
LINC01048-201ENST00000414480 RNF225M0QZC1 329 aaPredicted RBP5.52□□□□□ -1.53
LINC01048-201ENST00000414480 PPFIA3O75145 1194 aa5.52□□□□□ -1.53
LINC01048-201ENST00000414480 CLSTN1O94985 981 aa5.52□□□□□ -1.53
LINC01048-201ENST00000414480 UPP2O95045 317 aa5.52□□□□□ -1.53
LINC01048-201ENST00000414480 ZIC2O95409 532 aaPredicted RBP5.52□□□□□ -1.53
LINC01048-201ENST00000414480 IRX6P78412 446 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms