RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 AEBP2Q6ZN18 517 aaPredicted RBP16.48■□□□□ 0.23
LINC01048-201ENST00000414480 CHIC1Q5VXU3 224 aa15.51■□□□□ 0.07
LINC01048-201ENST00000414480 SENP3Q9H4L4 574 aaPredicted RBP14.15□□□□□ -0.14
LINC01048-201ENST00000414480 PHF23Q9BUL5 403 aaPredicted RBP13.9□□□□□ -0.18
LINC01048-201ENST00000414480 FOXD1Q16676 465 aa13.16□□□□□ -0.3
LINC01048-201ENST00000414480 MSH5O43196 834 aa12.45□□□□□ -0.42
LINC01048-201ENST00000414480 POTEDQ86YR6 584 aa12.41□□□□□ -0.42
LINC01048-201ENST00000414480 PLPPR3Q6T4P5 718 aa12.33□□□□□ -0.44
LINC01048-201ENST00000414480 PIAS4Q8N2W9 510 aaPredicted RBP12.28□□□□□ -0.44
LINC01048-201ENST00000414480 PPP6R1Q9UPN7 881 aa12.14□□□□□ -0.47
LINC01048-201ENST00000414480 ADRA2BP18089 450 aa12.09□□□□□ -0.47
LINC01048-201ENST00000414480 DMRT2Q9Y5R5 561 aa11.18□□□□□ -0.62
LINC01048-201ENST00000414480 MAPK8IP2Q13387 824 aaPredicted RBP11.15□□□□□ -0.62
LINC01048-201ENST00000414480 SCAF1Q9H7N4 1312 aaKnown RBP11.14□□□□□ -0.63
LINC01048-201ENST00000414480 CACNB1Q02641 598 aaPredicted RBP10.76□□□□□ -0.69
LINC01048-201ENST00000414480 PPP4R3CPQ6ZMV5 832 aa10.76□□□□□ -0.69
LINC01048-201ENST00000414480 DCAF8L1A6NGE4 600 aa10.71□□□□□ -0.69
LINC01048-201ENST00000414480 HOXD11P31277 338 aaPredicted RBP10.69□□□□□ -0.7
LINC01048-201ENST00000414480 CNKSR2Q8WXI2 1034 aa10.62□□□□□ -0.71
LINC01048-201ENST00000414480 RNF216Q9NWF9 866 aaPredicted RBP10.58□□□□□ -0.72
LINC01048-201ENST00000414480 RNF39Q9H2S5 420 aa10.57□□□□□ -0.72
LINC01048-201ENST00000414480 C1QBPQ07021 282 aaKnown RBP10.43□□□□□ -0.74
LINC01048-201ENST00000414480 DNAJC5BQ9UF47 199 aa10.4□□□□□ -0.74
LINC01048-201ENST00000414480 NCBP3Q53F19 620 aaKnown RBP10.33□□□□□ -0.76
LINC01048-201ENST00000414480 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.19□□□□□ -0.78
LINC01048-201ENST00000414480 NPM3O75607 178 aaKnown RBP10.14□□□□□ -0.79
LINC01048-201ENST00000414480 U3KPZ7 1027 aaPredicted RBP9.94□□□□□ -0.82
LINC01048-201ENST00000414480 CAPN15O75808 1086 aa9.85□□□□□ -0.83
LINC01048-201ENST00000414480 DSG3P32926 999 aa9.83□□□□□ -0.84
LINC01048-201ENST00000414480 SPINK5Q9NQ38 1064 aaPredicted RBP9.83□□□□□ -0.84
LINC01048-201ENST00000414480 KCNA4P22459 653 aa9.77□□□□□ -0.85
LINC01048-201ENST00000414480 APLP2Q06481 763 aa9.72□□□□□ -0.85
LINC01048-201ENST00000414480 SLC4A2P04920 1241 aa9.71□□□□□ -0.86
LINC01048-201ENST00000414480 POTEHQ6S545 545 aa9.7□□□□□ -0.86
LINC01048-201ENST00000414480 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.66□□□□□ -0.86
LINC01048-201ENST00000414480 HNRNPUL2Q1KMD3 747 aaKnown RBP9.66□□□□□ -0.86
LINC01048-201ENST00000414480 ZNF219Q9P2Y4 722 aaPredicted RBP9.66□□□□□ -0.86
LINC01048-201ENST00000414480 TRHP20396 242 aaPredicted RBP9.64□□□□□ -0.87
LINC01048-201ENST00000414480 ABCB7O75027 752 aa9.59□□□□□ -0.87
LINC01048-201ENST00000414480 SAMD1Q6SPF0 538 aaPredicted RBP9.58□□□□□ -0.88
LINC01048-201ENST00000414480 RBM42Q9BTD8 480 aaKnown RBP9.44□□□□□ -0.9
LINC01048-201ENST00000414480 MYCNP04198 464 aaPredicted RBP9.42□□□□□ -0.9
LINC01048-201ENST00000414480 POLA2Q14181 598 aa9.34□□□□□ -0.91
LINC01048-201ENST00000414480 CHRDL2Q6WN34 429 aa9.26□□□□□ -0.93
LINC01048-201ENST00000414480 FOXD4L1Q9NU39 408 aa9.22□□□□□ -0.93
LINC01048-201ENST00000414480 SLC4A1APQ9BWU0 796 aaKnown RBP9.21□□□□□ -0.94
LINC01048-201ENST00000414480 ZBTB12Q9Y330 459 aaPredicted RBP9.21□□□□□ -0.94
LINC01048-201ENST00000414480 AKT1S1Q96B36 256 aa9.16□□□□□ -0.94
LINC01048-201ENST00000414480 ATF5Q9Y2D1 282 aaPredicted RBP9.15□□□□□ -0.94
LINC01048-201ENST00000414480 OSCARQ8IYS5 282 aa9.06□□□□□ -0.96
LINC01048-201ENST00000414480 REM2Q8IYK8 340 aaPredicted RBP9.04□□□□□ -0.96
LINC01048-201ENST00000414480 SP7Q8TDD2 431 aaPredicted RBP9.02□□□□□ -0.97
LINC01048-201ENST00000414480 PIP4P2Q8N4L2 257 aa9□□□□□ -0.97
LINC01048-201ENST00000414480 PITPNM1O00562 1244 aa8.96□□□□□ -0.98
LINC01048-201ENST00000414480 ZBTB22O15209 634 aa8.96□□□□□ -0.98
LINC01048-201ENST00000414480 ATXN8OSP0DMR3 200 aa8.96□□□□□ -0.98
LINC01048-201ENST00000414480 FXR2P51116 673 aaKnown RBP eCLIP8.92□□□□□ -0.98
LINC01048-201ENST00000414480 SPDYE2BA6NHP3 402 aa8.88□□□□□ -0.99
LINC01048-201ENST00000414480 HAX1O00165 279 aa8.88□□□□□ -0.99
LINC01048-201ENST00000414480 SPDYE6P0CI01 402 aa8.88□□□□□ -0.99
LINC01048-201ENST00000414480 SPDYE2Q495Y8 402 aa8.88□□□□□ -0.99
LINC01048-201ENST00000414480 FBLN2P98095 1184 aa8.87□□□□□ -0.99
LINC01048-201ENST00000414480 SPDYE1Q8NFV5 336 aaPredicted RBP8.77□□□□□ -1.01
LINC01048-201ENST00000414480 PRKAR2AP13861 404 aaKnown RBP8.73□□□□□ -1.01
LINC01048-201ENST00000414480 MKRN4PQ13434 485 aaPredicted RBP8.73□□□□□ -1.01
LINC01048-201ENST00000414480 CLEC11AQ9Y240 323 aa8.73□□□□□ -1.01
LINC01048-201ENST00000414480 SSUH2Q9Y2M2 353 aa8.73□□□□□ -1.01
LINC01048-201ENST00000414480 ZNF692Q9BU19 519 aaPredicted RBP8.72□□□□□ -1.01
LINC01048-201ENST00000414480 EVX2Q03828 476 aa8.71□□□□□ -1.02
LINC01048-201ENST00000414480 C19orf67A6NJJ6 358 aa8.64□□□□□ -1.03
LINC01048-201ENST00000414480 PABPN1Q86U42 306 aaKnown RBP eCLIP8.58□□□□□ -1.04
LINC01048-201ENST00000414480 PRR29P0C7W0 189 aa8.57□□□□□ -1.04
LINC01048-201ENST00000414480 CHADLQ6NUI6 762 aa8.56□□□□□ -1.04
LINC01048-201ENST00000414480 GABBR2O75899 941 aa8.54□□□□□ -1.04
LINC01048-201ENST00000414480 CD44P16070 742 aaKnown RBP8.45□□□□□ -1.06
LINC01048-201ENST00000414480 LHX8Q68G74 356 aa8.44□□□□□ -1.06
LINC01048-201ENST00000414480 FARP1Q9Y4F1 1045 aaPredicted RBP8.44□□□□□ -1.06
LINC01048-201ENST00000414480 CLCN6P51797 869 aa8.42□□□□□ -1.06
LINC01048-201ENST00000414480 NISCHQ9Y2I1 1504 aa8.4□□□□□ -1.06
LINC01048-201ENST00000414480 CSRNP3Q8WYN3 585 aa8.39□□□□□ -1.07
LINC01048-201ENST00000414480 STAG3Q9UJ98 1225 aa8.35□□□□□ -1.07
LINC01048-201ENST00000414480 POTEIP0CG38 1075 aa8.34□□□□□ -1.07
LINC01048-201ENST00000414480 ZNF579Q8NAF0 562 aaKnown RBP8.32□□□□□ -1.08
LINC01048-201ENST00000414480 DCBLD2Q96PD2 775 aa8.3□□□□□ -1.08
LINC01048-201ENST00000414480 CREBZFQ9NS37 354 aa8.3□□□□□ -1.08
LINC01048-201ENST00000414480 ZRANB1Q9UGI0 708 aa8.29□□□□□ -1.08
LINC01048-201ENST00000414480 SPDYE4A6NLX3 237 aa8.26□□□□□ -1.09
LINC01048-201ENST00000414480 PAK3O75914 559 aaPredicted RBP8.23□□□□□ -1.09
LINC01048-201ENST00000414480 GALR2O43603 387 aaPredicted RBP8.2□□□□□ -1.1
LINC01048-201ENST00000414480 EHMT2Q96KQ7 1210 aa8.19□□□□□ -1.1
LINC01048-201ENST00000414480 NPM1P06748 294 aaKnown RBP eCLIP8.18□□□□□ -1.1
LINC01048-201ENST00000414480 PHF12Q96QT6 1004 aa8.14□□□□□ -1.11
LINC01048-201ENST00000414480 MNX1P50219 401 aaPredicted RBP8.13□□□□□ -1.11
LINC01048-201ENST00000414480 ABCC9O60706 1549 aa8.13□□□□□ -1.11
LINC01048-201ENST00000414480 OTUD5Q96G74 571 aa8.08□□□□□ -1.12
LINC01048-201ENST00000414480 POTEB2H3BUK9 544 aa8.06□□□□□ -1.12
LINC01048-201ENST00000414480 ASTLQ6HA08 431 aaPredicted RBP8.04□□□□□ -1.12
LINC01048-201ENST00000414480 PROM2Q8N271 834 aa8.04□□□□□ -1.12
LINC01048-201ENST00000414480 MS4A3Q96HJ5 214 aa8.04□□□□□ -1.12
LINC01048-201ENST00000414480 PLSCR2Q9NRY7 297 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms