RNA–Protein interactions for RNA: ENST00000414480.1

LINC01048-201, Transcript of long intergenic non-protein coding RNA 1048, humanhuman

TSL 2 BASIC

Gene LINC01048, Length 511 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01048-201ENST00000414480 AEBP2Q6ZN18 517 aaPredicted RBP16.48■□□□□ 0.23
LINC01048-201ENST00000414480 CHIC1Q5VXU3 224 aa15.51■□□□□ 0.07
LINC01048-201ENST00000414480 SENP3Q9H4L4 574 aaPredicted RBP14.15□□□□□ -0.14
LINC01048-201ENST00000414480 PHF23Q9BUL5 403 aaPredicted RBP13.9□□□□□ -0.18
LINC01048-201ENST00000414480 FOXD1Q16676 465 aa13.16□□□□□ -0.3
LINC01048-201ENST00000414480 MSH5O43196 834 aa12.45□□□□□ -0.42
LINC01048-201ENST00000414480 POTEDQ86YR6 584 aa12.41□□□□□ -0.42
LINC01048-201ENST00000414480 PLPPR3Q6T4P5 718 aa12.33□□□□□ -0.44
LINC01048-201ENST00000414480 PIAS4Q8N2W9 510 aaPredicted RBP12.28□□□□□ -0.44
LINC01048-201ENST00000414480 PPP6R1Q9UPN7 881 aa12.14□□□□□ -0.47
LINC01048-201ENST00000414480 ADRA2BP18089 450 aa12.09□□□□□ -0.47
LINC01048-201ENST00000414480 DMRT2Q9Y5R5 561 aa11.18□□□□□ -0.62
LINC01048-201ENST00000414480 MAPK8IP2Q13387 824 aaPredicted RBP11.15□□□□□ -0.62
LINC01048-201ENST00000414480 SCAF1Q9H7N4 1312 aaKnown RBP11.14□□□□□ -0.63
LINC01048-201ENST00000414480 CACNB1Q02641 598 aaPredicted RBP10.76□□□□□ -0.69
LINC01048-201ENST00000414480 PPP4R3CPQ6ZMV5 832 aa10.76□□□□□ -0.69
LINC01048-201ENST00000414480 DCAF8L1A6NGE4 600 aa10.71□□□□□ -0.69
LINC01048-201ENST00000414480 HOXD11P31277 338 aaPredicted RBP10.69□□□□□ -0.7
LINC01048-201ENST00000414480 CNKSR2Q8WXI2 1034 aa10.62□□□□□ -0.71
LINC01048-201ENST00000414480 RNF216Q9NWF9 866 aaPredicted RBP10.58□□□□□ -0.72
LINC01048-201ENST00000414480 RNF39Q9H2S5 420 aa10.57□□□□□ -0.72
LINC01048-201ENST00000414480 C1QBPQ07021 282 aaKnown RBP10.43□□□□□ -0.74
LINC01048-201ENST00000414480 DNAJC5BQ9UF47 199 aa10.4□□□□□ -0.74
LINC01048-201ENST00000414480 NCBP3Q53F19 620 aaKnown RBP10.33□□□□□ -0.76
LINC01048-201ENST00000414480 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.19□□□□□ -0.78
LINC01048-201ENST00000414480 NPM3O75607 178 aaKnown RBP10.14□□□□□ -0.79
LINC01048-201ENST00000414480 U3KPZ7 1027 aaPredicted RBP9.94□□□□□ -0.82
LINC01048-201ENST00000414480 CAPN15O75808 1086 aa9.85□□□□□ -0.83
LINC01048-201ENST00000414480 DSG3P32926 999 aa9.83□□□□□ -0.84
LINC01048-201ENST00000414480 SPINK5Q9NQ38 1064 aaPredicted RBP9.83□□□□□ -0.84
LINC01048-201ENST00000414480 KCNA4P22459 653 aa9.77□□□□□ -0.85
LINC01048-201ENST00000414480 APLP2Q06481 763 aa9.72□□□□□ -0.85
LINC01048-201ENST00000414480 SLC4A2P04920 1241 aa9.71□□□□□ -0.86
LINC01048-201ENST00000414480 POTEHQ6S545 545 aa9.7□□□□□ -0.86
LINC01048-201ENST00000414480 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.66□□□□□ -0.86
LINC01048-201ENST00000414480 HNRNPUL2Q1KMD3 747 aaKnown RBP9.66□□□□□ -0.86
LINC01048-201ENST00000414480 ZNF219Q9P2Y4 722 aaPredicted RBP9.66□□□□□ -0.86
LINC01048-201ENST00000414480 TRHP20396 242 aaPredicted RBP9.64□□□□□ -0.87
LINC01048-201ENST00000414480 ABCB7O75027 752 aa9.59□□□□□ -0.87
LINC01048-201ENST00000414480 SAMD1Q6SPF0 538 aaPredicted RBP9.58□□□□□ -0.88
LINC01048-201ENST00000414480 RBM42Q9BTD8 480 aaKnown RBP9.44□□□□□ -0.9
LINC01048-201ENST00000414480 MYCNP04198 464 aaPredicted RBP9.42□□□□□ -0.9
LINC01048-201ENST00000414480 POLA2Q14181 598 aa9.34□□□□□ -0.91
LINC01048-201ENST00000414480 CHRDL2Q6WN34 429 aa9.26□□□□□ -0.93
LINC01048-201ENST00000414480 FOXD4L1Q9NU39 408 aa9.22□□□□□ -0.93
LINC01048-201ENST00000414480 SLC4A1APQ9BWU0 796 aaKnown RBP9.21□□□□□ -0.94
LINC01048-201ENST00000414480 ZBTB12Q9Y330 459 aaPredicted RBP9.21□□□□□ -0.94
LINC01048-201ENST00000414480 AKT1S1Q96B36 256 aa9.16□□□□□ -0.94
LINC01048-201ENST00000414480 ATF5Q9Y2D1 282 aaPredicted RBP9.15□□□□□ -0.94
LINC01048-201ENST00000414480 OSCARQ8IYS5 282 aa9.06□□□□□ -0.96
LINC01048-201ENST00000414480 REM2Q8IYK8 340 aaPredicted RBP9.04□□□□□ -0.96
LINC01048-201ENST00000414480 SP7Q8TDD2 431 aaPredicted RBP9.02□□□□□ -0.97
LINC01048-201ENST00000414480 PIP4P2Q8N4L2 257 aa9□□□□□ -0.97
LINC01048-201ENST00000414480 PITPNM1O00562 1244 aa8.96□□□□□ -0.98
LINC01048-201ENST00000414480 ZBTB22O15209 634 aa8.96□□□□□ -0.98
LINC01048-201ENST00000414480 ATXN8OSP0DMR3 200 aa8.96□□□□□ -0.98
LINC01048-201ENST00000414480 FXR2P51116 673 aaKnown RBP eCLIP8.92□□□□□ -0.98
LINC01048-201ENST00000414480 SPDYE2BA6NHP3 402 aa8.88□□□□□ -0.99
LINC01048-201ENST00000414480 HAX1O00165 279 aa8.88□□□□□ -0.99
LINC01048-201ENST00000414480 SPDYE6P0CI01 402 aa8.88□□□□□ -0.99
LINC01048-201ENST00000414480 SPDYE2Q495Y8 402 aa8.88□□□□□ -0.99
LINC01048-201ENST00000414480 FBLN2P98095 1184 aa8.87□□□□□ -0.99
LINC01048-201ENST00000414480 SPDYE1Q8NFV5 336 aaPredicted RBP8.77□□□□□ -1.01
LINC01048-201ENST00000414480 PRKAR2AP13861 404 aaKnown RBP8.73□□□□□ -1.01
LINC01048-201ENST00000414480 MKRN4PQ13434 485 aaPredicted RBP8.73□□□□□ -1.01
LINC01048-201ENST00000414480 CLEC11AQ9Y240 323 aa8.73□□□□□ -1.01
LINC01048-201ENST00000414480 SSUH2Q9Y2M2 353 aa8.73□□□□□ -1.01
LINC01048-201ENST00000414480 ZNF692Q9BU19 519 aaPredicted RBP8.72□□□□□ -1.01
LINC01048-201ENST00000414480 EVX2Q03828 476 aa8.71□□□□□ -1.02
LINC01048-201ENST00000414480 C19orf67A6NJJ6 358 aa8.64□□□□□ -1.03
LINC01048-201ENST00000414480 PABPN1Q86U42 306 aaKnown RBP eCLIP8.58□□□□□ -1.04
LINC01048-201ENST00000414480 PRR29P0C7W0 189 aa8.57□□□□□ -1.04
LINC01048-201ENST00000414480 CHADLQ6NUI6 762 aa8.56□□□□□ -1.04
LINC01048-201ENST00000414480 GABBR2O75899 941 aa8.54□□□□□ -1.04
LINC01048-201ENST00000414480 CD44P16070 742 aaKnown RBP8.45□□□□□ -1.06
LINC01048-201ENST00000414480 LHX8Q68G74 356 aa8.44□□□□□ -1.06
LINC01048-201ENST00000414480 FARP1Q9Y4F1 1045 aaPredicted RBP8.44□□□□□ -1.06
LINC01048-201ENST00000414480 CLCN6P51797 869 aa8.42□□□□□ -1.06
LINC01048-201ENST00000414480 NISCHQ9Y2I1 1504 aa8.4□□□□□ -1.06
LINC01048-201ENST00000414480 CSRNP3Q8WYN3 585 aa8.39□□□□□ -1.07
LINC01048-201ENST00000414480 STAG3Q9UJ98 1225 aa8.35□□□□□ -1.07
LINC01048-201ENST00000414480 POTEIP0CG38 1075 aa8.34□□□□□ -1.07
LINC01048-201ENST00000414480 ZNF579Q8NAF0 562 aaKnown RBP8.32□□□□□ -1.08
LINC01048-201ENST00000414480 DCBLD2Q96PD2 775 aa8.3□□□□□ -1.08
LINC01048-201ENST00000414480 CREBZFQ9NS37 354 aa8.3□□□□□ -1.08
LINC01048-201ENST00000414480 ZRANB1Q9UGI0 708 aa8.29□□□□□ -1.08
LINC01048-201ENST00000414480 SPDYE4A6NLX3 237 aa8.26□□□□□ -1.09
LINC01048-201ENST00000414480 PAK3O75914 559 aaPredicted RBP8.23□□□□□ -1.09
LINC01048-201ENST00000414480 GALR2O43603 387 aaPredicted RBP8.2□□□□□ -1.1
LINC01048-201ENST00000414480 EHMT2Q96KQ7 1210 aa8.19□□□□□ -1.1
LINC01048-201ENST00000414480 NPM1P06748 294 aaKnown RBP eCLIP8.18□□□□□ -1.1
LINC01048-201ENST00000414480 PHF12Q96QT6 1004 aa8.14□□□□□ -1.11
LINC01048-201ENST00000414480 MNX1P50219 401 aaPredicted RBP8.13□□□□□ -1.11
LINC01048-201ENST00000414480 ABCC9O60706 1549 aa8.13□□□□□ -1.11
LINC01048-201ENST00000414480 OTUD5Q96G74 571 aa8.08□□□□□ -1.12
LINC01048-201ENST00000414480 POTEB2H3BUK9 544 aa8.06□□□□□ -1.12
LINC01048-201ENST00000414480 ASTLQ6HA08 431 aaPredicted RBP8.04□□□□□ -1.12
LINC01048-201ENST00000414480 PROM2Q8N271 834 aa8.04□□□□□ -1.12
LINC01048-201ENST00000414480 MS4A3Q96HJ5 214 aa8.04□□□□□ -1.12
LINC01048-201ENST00000414480 PLSCR2Q9NRY7 297 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms