RNA–Protein interactions for RNA: ENSMUST00000106618.7

Ttc39a-202, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39a, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-202ENSMUST00000106618 Amigo3Q8C2S7 508 aa13.62□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 TnrQ8BYI9 1358 aa13.62□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Igsf1Q7TQA1 1317 aa13.62□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 1700019A02RikA0A087WPV9 146 aa13.62□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Gsdma3Q5Y4Y6 464 aa13.62□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Dzip1Q8BMD2 852 aa13.62□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Amotl2Q8K371 772 aa13.62□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Ipo9Q91YE6 1041 aa13.62□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Nid2O88322 1403 aa13.61□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Msh6P54276 1358 aaKnown RBP13.61□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Kif24Q6NWW5 1356 aa13.61□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Atf3Q60765 181 aa13.61□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Cluap1Q8R3P7 413 aa13.61□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Pibf1E9Q6K3 756 aa13.6□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Rtl5Q5DTT4 599 aa13.6□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Amotl1Q9D4H4 968 aa13.6□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Foxp4Q9DBY0 795 aaKnown RBP13.6□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Ddx17Q501J6 650 aaKnown RBP13.6□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Ric3Q8BPM6 367 aa13.6□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Aifm3Q3TY86 605 aa13.59□□□□□ -0.23
Ttc39a-202ENSMUST00000106618 Pip4k2bQ80XI4 416 aa13.58□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Dixdc1Q80Y83 711 aa13.58□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Ppp1r37Q8BKR5 712 aa13.58□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Ppp2r3aB2RXC8 1150 aa13.57□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Dlg5E9Q9R9 1921 aa13.57□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Chmp4bQ9D8B3 224 aaKnown RBP13.56□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Col15a1O35206 1367 aa13.56□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Pnmal2G3X9N3 661 aa13.56□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Aplp1Q03157 653 aa13.56□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 4930567H17RikQ3V0K5 233 aa13.55□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Nol11Q8BJW5 723 aaKnown RBP13.55□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Phf23Q8BSN5 401 aa13.55□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Cyp2d12Q8BVD2 504 aa13.55□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Aldh1l2Q8K009 923 aa13.55□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Ccdc183A2AJB1 534 aa13.54□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Atf5O70191 283 aa13.54□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Abca15E9PWH4 1668 aa13.54□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Aox2Q5SGK3 1345 aa13.54□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Abcc12Q80WJ6 1366 aa13.54□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Trim30dE9PWL0 497 aa13.54□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Ak7Q9D2H2 614 aa13.54□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Simc1E9Q6E9 1354 aa13.53□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 SkilQ60665 675 aa13.53□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Sv2bQ8BG39 683 aa13.53□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Myt1Q8CFC2 1127 aa13.53□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Q3TQI7 289 aaKnown RBP13.52□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Phlpp2Q8BXA7 1320 aa13.52□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 DccP70211 1447 aa13.52□□□□□ -0.24
Ttc39a-202ENSMUST00000106618 Nkx2-3P97334 362 aa13.52□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Chpf2Q3UU43 768 aa13.52□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Wwc1Q5SXA9 1104 aa13.52□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 FocadA2AKG8 1798 aa13.52□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Bcl9lQ67FY2 1494 aa13.52□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Gm21698A0A087WQP8 267 aa13.51□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Gm21671G3UY31 267 aa13.51□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Nkx1-2P42580 305 aa13.51□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Card10P58660 1021 aa13.51□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Fam83gQ5SWY7 812 aa13.51□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Ipo8Q7TMY7 1010 aa13.51□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Tmc1Q8R4P5 757 aa13.51□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Brinp3Q499E0 766 aa13.51□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Trim27Q62158 513 aa13.51□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 OptnQ8K3K8 584 aa13.51□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Pnpla7A2AJ88 1352 aa13.5□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Brd1E9PZ26 1189 aaKnown RBP13.5□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 ChgaP26339 463 aaKnown RBP13.5□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 CrklP47941 303 aa13.5□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Tm6sf1P58749 370 aa13.5□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 TkfcQ8VC30 578 aa13.5□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Tnks1bp1P58871 1720 aa13.49□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Gm10471E9Q1C7 252 aa13.49□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Eif4a1P60843 406 aaKnown RBP13.49□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 LifrP42703 1092 aa13.49□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Kif18aQ91WD7 886 aa13.48□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 BcorQ8CGN4 1759 aa13.48□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Triml2E9PW10 424 aa13.47□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Arhgef1Q61210 920 aaKnown RBP13.47□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Disp3A3KFU9 1347 aa13.47□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Tnnt1O88346 262 aa13.47□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Map7O88735 730 aa13.47□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Prkar2bP31324 416 aa13.47□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Zfp142G5E869 1843 aa13.46□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Slit1Q80TR4 1531 aa13.46□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Cnksr1A2A9K7 700 aa13.46□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Cyp2d11P24457 504 aa13.46□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Cetn4Q8K4K1 168 aa13.46□□□□□ -0.25
Ttc39a-202ENSMUST00000106618 Col1a2Q01149 1372 aa13.46□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Btbd11Q6GQW0 1109 aa13.45□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Fam13aQ8BGI4 693 aa13.45□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 ThemisQ8BGW0 636 aa13.45□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 HnrnpuQ8VEK3 800 aaKnown RBP13.45□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 CarsQ9ER72 831 aaKnown RBP13.45□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Tns2Q8CGB6 1400 aa13.45□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Pdzd9Q9D9M4 266 aa13.45□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Atp10bB1AWN4 1474 aa13.44□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 CoilQ5SU73 570 aa13.44□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Cog6Q8R3I3 657 aa13.44□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 CanxP35564 591 aaKnown RBP13.43□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Fgd1P52734 960 aa13.43□□□□□ -0.26
Ttc39a-202ENSMUST00000106618 Zranb3Q6NZP1 1069 aa13.43□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 195.1 ms