RNA–Protein interactions for RNA: ENSMUST00000106618.7

Ttc39a-202, Transcript of Tetratricopeptide repeat protein 39A, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39a, Length 1,970 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39a-202ENSMUST00000106618 NischQ80TM9 1593 aa21.95■■□□□ 1.11
Ttc39a-202ENSMUST00000106618 Gm35339A0A140LHH9 1649 aa21.86■■□□□ 1.09
Ttc39a-202ENSMUST00000106618 Abcc9P70170 1546 aa21.34■■□□□ 1.01
Ttc39a-202ENSMUST00000106618 Abcc8B2RUS7 1588 aa20.98■□□□□ 0.95
Ttc39a-202ENSMUST00000106618 Rhox8Q6VSS7 320 aa19.83■□□□□ 0.77
Ttc39a-202ENSMUST00000106618 ScribQ80U72 1612 aa19.75■□□□□ 0.75
Ttc39a-202ENSMUST00000106618 Dcaf1Q80TR8 1506 aa19.53■□□□□ 0.72
Ttc39a-202ENSMUST00000106618 Rtl1Q7M732 1744 aa19.41■□□□□ 0.7
Ttc39a-202ENSMUST00000106618 Kdm5dQ62240 1548 aa19.27■□□□□ 0.68
Ttc39a-202ENSMUST00000106618 Rb1cc1Q9ESK9 1588 aa19.21■□□□□ 0.67
Ttc39a-202ENSMUST00000106618 NacadQ5SWP3 1504 aa19.17■□□□□ 0.66
Ttc39a-202ENSMUST00000106618 Ccdc180J3QNE4 1664 aa19.08■□□□□ 0.65
Ttc39a-202ENSMUST00000106618 Baz1aO88379 1555 aa18.99■□□□□ 0.63
Ttc39a-202ENSMUST00000106618 Zcchc6Q5BLK4 1491 aaKnown RBP18.83■□□□□ 0.6
Ttc39a-202ENSMUST00000106618 Sycp2Q9CUU3 1500 aa18.77■□□□□ 0.6
Ttc39a-202ENSMUST00000106618 Crybg2B7ZCC2 1516 aa18.75■□□□□ 0.59
Ttc39a-202ENSMUST00000106618 Smarca2Q6DIC0 1577 aa18.55■□□□□ 0.56
Ttc39a-202ENSMUST00000106618 Ccdc136Q3TVA9 1136 aa18.44■□□□□ 0.54
Ttc39a-202ENSMUST00000106618 BicraF8VPZ9 1578 aa18.41■□□□□ 0.54
Ttc39a-202ENSMUST00000106618 Cecr2E9Q2Z1 1453 aa18.16■□□□□ 0.5
Ttc39a-202ENSMUST00000106618 Trim41Q5NCC3 630 aa18.13■□□□□ 0.49
Ttc39a-202ENSMUST00000106618 HrcG5E8J6 738 aa18.08■□□□□ 0.48
Ttc39a-202ENSMUST00000106618 Brd4Q9ESU6 1400 aaKnown RBP18.03■□□□□ 0.48
Ttc39a-202ENSMUST00000106618 Synj1Q8CHC4 1574 aa17.95■□□□□ 0.46
Ttc39a-202ENSMUST00000106618 Smarca4Q3TKT4 1613 aaKnown RBP17.89■□□□□ 0.45
Ttc39a-202ENSMUST00000106618 CftrP26361 1476 aa17.87■□□□□ 0.45
Ttc39a-202ENSMUST00000106618 Cttnbp2B9EJA2 1648 aa17.81■□□□□ 0.44
Ttc39a-202ENSMUST00000106618 Golga3P55937 1487 aa17.75■□□□□ 0.43
Ttc39a-202ENSMUST00000106618 Cep164Q5DU05 1446 aa17.68■□□□□ 0.42
Ttc39a-202ENSMUST00000106618 Iqgap2Q3UQ44 1575 aa17.67■□□□□ 0.42
Ttc39a-202ENSMUST00000106618 Cngb1E1AZ71 1325 aa17.67■□□□□ 0.42
Ttc39a-202ENSMUST00000106618 Atad2bE9Q166 1460 aaKnown RBP17.67■□□□□ 0.42
Ttc39a-202ENSMUST00000106618 Top2bQ64511 1612 aa17.64■□□□□ 0.41
Ttc39a-202ENSMUST00000106618 Pds5bQ4VA53 1446 aaKnown RBP17.62■□□□□ 0.41
Ttc39a-202ENSMUST00000106618 Rsf1E9PWW9 1441 aaKnown RBP17.61■□□□□ 0.41
Ttc39a-202ENSMUST00000106618 Esf1Q3V1V3 845 aaKnown RBP17.58■□□□□ 0.4
Ttc39a-202ENSMUST00000106618 Ccdc88bQ4QRL3 1481 aa17.55■□□□□ 0.4
Ttc39a-202ENSMUST00000106618 Chic1Q8CBW7 227 aa17.55■□□□□ 0.4
Ttc39a-202ENSMUST00000106618 Cc2d2aQ8CFW7 1633 aa17.44■□□□□ 0.38
Ttc39a-202ENSMUST00000106618 Wdr62Q3U3T8 1523 aa17.37■□□□□ 0.37
Ttc39a-202ENSMUST00000106618 Frmpd1A2AKB4 1549 aa17.37■□□□□ 0.37
Ttc39a-202ENSMUST00000106618 Fmn1Q05860 1466 aa17.34■□□□□ 0.37
Ttc39a-202ENSMUST00000106618 Ercc6F8VPZ5 1481 aa17.28■□□□□ 0.36
Ttc39a-202ENSMUST00000106618 Gab3Q8BSM5 595 aa17.26■□□□□ 0.35
Ttc39a-202ENSMUST00000106618 Unc13aQ4KUS2 1712 aa17.24■□□□□ 0.35
Ttc39a-202ENSMUST00000106618 Top2aQ01320 1528 aaKnown RBP17.22■□□□□ 0.35
Ttc39a-202ENSMUST00000106618 TnnQ80Z71 1560 aa17.22■□□□□ 0.35
Ttc39a-202ENSMUST00000106618 Thoc2B1AZI6 1594 aaKnown RBP17.19■□□□□ 0.34
Ttc39a-202ENSMUST00000106618 Ehmt2Q9Z148 1263 aaKnown RBP17.17■□□□□ 0.34
Ttc39a-202ENSMUST00000106618 Lamc3Q9R0B6 1581 aa17.14■□□□□ 0.33
Ttc39a-202ENSMUST00000106618 Rapgef2Q8CHG7 1496 aa17.09■□□□□ 0.33
Ttc39a-202ENSMUST00000106618 Acin1Q9JIX8 1338 aaKnown RBP17.02■□□□□ 0.32
Ttc39a-202ENSMUST00000106618 Kif15Q6P9L6 1387 aa17.02■□□□□ 0.31
Ttc39a-202ENSMUST00000106618 Phldb1Q6PDH0 1371 aaKnown RBP17.02■□□□□ 0.31
Ttc39a-202ENSMUST00000106618 Rpgrip1Q9EPQ2 1331 aa17.01■□□□□ 0.31
Ttc39a-202ENSMUST00000106618 Fam135aQ6NS59 1506 aa16.97■□□□□ 0.31
Ttc39a-202ENSMUST00000106618 Camsap1A2AHC3 1581 aa16.94■□□□□ 0.3
Ttc39a-202ENSMUST00000106618 Cep162Q6ZQ06 1403 aa16.93■□□□□ 0.3
Ttc39a-202ENSMUST00000106618 Eif4g1Q6NZJ6 1600 aaKnown RBP16.91■□□□□ 0.3
Ttc39a-202ENSMUST00000106618 Ubl4bQ9CQ84 188 aa16.84■□□□□ 0.29
Ttc39a-202ENSMUST00000106618 PtprkP35822 1457 aa16.84■□□□□ 0.29
Ttc39a-202ENSMUST00000106618 Ccdc18Q640L5 1455 aa16.83■□□□□ 0.28
Ttc39a-202ENSMUST00000106618 NrkQ9R0G8 1455 aa16.82■□□□□ 0.28
Ttc39a-202ENSMUST00000106618 Il27Q8K3I6 234 aa16.82■□□□□ 0.28
Ttc39a-202ENSMUST00000106618 Cux2P70298 1426 aa16.81■□□□□ 0.28
Ttc39a-202ENSMUST00000106618 Npm2Q80W85 207 aa16.8■□□□□ 0.28
Ttc39a-202ENSMUST00000106618 Shroom4Q1W617 1475 aa16.79■□□□□ 0.28
Ttc39a-202ENSMUST00000106618 Grin2bQ01097 1482 aa16.78■□□□□ 0.28
Ttc39a-202ENSMUST00000106618 Arhgap35Q91YM2 1499 aa16.76■□□□□ 0.27
Ttc39a-202ENSMUST00000106618 Myt1lP97500 1187 aa16.72■□□□□ 0.27
Ttc39a-202ENSMUST00000106618 Npm1Q61937 292 aaKnown RBP16.67■□□□□ 0.26
Ttc39a-202ENSMUST00000106618 Baz1bQ9Z277 1479 aa16.67■□□□□ 0.26
Ttc39a-202ENSMUST00000106618 Map3k1P53349 1493 aa16.66■□□□□ 0.26
Ttc39a-202ENSMUST00000106618 Dnajc5bQ9CQ94 199 aa16.66■□□□□ 0.26
Ttc39a-202ENSMUST00000106618 LrpprcQ6PB66 1392 aaKnown RBP16.64■□□□□ 0.25
Ttc39a-202ENSMUST00000106618 PogzQ8BZH4 1409 aaKnown RBP16.62■□□□□ 0.25
Ttc39a-202ENSMUST00000106618 Mroh2bQ7M6Y6 1581 aa16.61■□□□□ 0.25
Ttc39a-202ENSMUST00000106618 Efcab5A0JP43 1406 aa16.61■□□□□ 0.25
Ttc39a-202ENSMUST00000106618 Clip1Q922J3 1391 aa16.58■□□□□ 0.24
Ttc39a-202ENSMUST00000106618 Duox2A2AQ99 1517 aa16.58■□□□□ 0.24
Ttc39a-202ENSMUST00000106618 Mrc2Q64449 1479 aa16.56■□□□□ 0.24
Ttc39a-202ENSMUST00000106618 AqrQ8CFQ3 1481 aaKnown RBP16.53■□□□□ 0.24
Ttc39a-202ENSMUST00000106618 Dhx29Q6PGC1 1365 aaKnown RBP16.53■□□□□ 0.24
Ttc39a-202ENSMUST00000106618 Kif21aQ9QXL2 1672 aa16.52■□□□□ 0.24
Ttc39a-202ENSMUST00000106618 Eea1Q8BL66 1411 aa16.49■□□□□ 0.23
Ttc39a-202ENSMUST00000106618 Mier1Q5UAK0 511 aa16.49■□□□□ 0.23
Ttc39a-202ENSMUST00000106618 Arap1Q4LDD4 1452 aa16.48■□□□□ 0.23
Ttc39a-202ENSMUST00000106618 Samd9lQ69Z37 1561 aa16.48■□□□□ 0.23
Ttc39a-202ENSMUST00000106618 Zeb1Q64318 1117 aa16.48■□□□□ 0.23
Ttc39a-202ENSMUST00000106618 Crocc2F6XLV1 1638 aa16.46■□□□□ 0.23
Ttc39a-202ENSMUST00000106618 Erich3F6QRE9 1637 aa16.44■□□□□ 0.22
Ttc39a-202ENSMUST00000106618 Ankrd26Q811D2 1581 aa16.44■□□□□ 0.22
Ttc39a-202ENSMUST00000106618 Setd5Q5XJV7 1441 aa16.44■□□□□ 0.22
Ttc39a-202ENSMUST00000106618 Arhgef5E9Q7D5 1581 aa16.43■□□□□ 0.22
Ttc39a-202ENSMUST00000106618 SynmQ70IV5 1561 aa16.43■□□□□ 0.22
Ttc39a-202ENSMUST00000106618 UbtfP25976 765 aaKnown RBP16.43■□□□□ 0.22
Ttc39a-202ENSMUST00000106618 Carmil1Q6EDY6 1374 aa16.43■□□□□ 0.22
Ttc39a-202ENSMUST00000106618 Plekhg3Q4VAC9 1341 aa16.39■□□□□ 0.21
Ttc39a-202ENSMUST00000106618 Cux1P53564 1515 aa16.37■□□□□ 0.21
Ttc39a-202ENSMUST00000106618 Rad54l2Q99NG0 1466 aa16.37■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 83.3 ms