Protein–RNA interactions for Protein: Q8BYI9

Tnr, Tenascin-R, mousemouse

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnrQ8BYI9 Gm25239-201ENSMUST00000174915 86 ntBASIC52.61■■■■■ 6.01
TnrQ8BYI9 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC48.83■■■■■ 5.41
TnrQ8BYI9 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC47.99■■■■■ 5.27
TnrQ8BYI9 Gm24109-201ENSMUST00000175489 103 ntBASIC45.81■■■■■ 4.92
TnrQ8BYI9 Gm15042-201ENSMUST00000120212 883 ntBASIC45.7■■■■■ 4.91
TnrQ8BYI9 Gm15045-201ENSMUST00000117359 883 ntBASIC44.69■■■■■ 4.75
TnrQ8BYI9 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC44.44■■■■■ 4.71
TnrQ8BYI9 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC44.34■■■■■ 4.69
TnrQ8BYI9 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC44.13■■■■■ 4.65
TnrQ8BYI9 Gm23366-201ENSMUST00000175022 89 ntBASIC43.87■■■■■ 4.61
TnrQ8BYI9 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC43.73■■■■■ 4.59
TnrQ8BYI9 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC43.29■■■■■ 4.52
TnrQ8BYI9 AC153911.1-202ENSMUST00000218534 1034 ntBASIC42.75■■■■■ 4.43
TnrQ8BYI9 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC42.73■■■■■ 4.43
TnrQ8BYI9 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC42.59■■■■■ 4.41
TnrQ8BYI9 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC42.44■■■■■ 4.38
TnrQ8BYI9 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC42.32■■■■■ 4.37
TnrQ8BYI9 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC42.25■■■■■ 4.35
TnrQ8BYI9 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC42.14■■■■■ 4.34
TnrQ8BYI9 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC41.89■■■■■ 4.3
TnrQ8BYI9 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC41.83■■■■■ 4.29
TnrQ8BYI9 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC41.79■■■■■ 4.28
TnrQ8BYI9 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC41.71■■■■■ 4.27
TnrQ8BYI9 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC41.68■■■■■ 4.26
TnrQ8BYI9 Gm25238-201ENSMUST00000174914 89 ntBASIC41.63■■■■■ 4.25
TnrQ8BYI9 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC41.59■■■■■ 4.25
TnrQ8BYI9 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC41.44■■■■■ 4.22
TnrQ8BYI9 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC41.41■■■■■ 4.22
TnrQ8BYI9 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC41.35■■■■■ 4.21
TnrQ8BYI9 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC41.16■■■■■ 4.18
TnrQ8BYI9 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC41.01■■■■■ 4.16
TnrQ8BYI9 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC41■■■■■ 4.15
TnrQ8BYI9 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC40.84■■■■■ 4.13
TnrQ8BYI9 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC40.75■■■■■ 4.11
TnrQ8BYI9 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC40.59■■■■■ 4.09
TnrQ8BYI9 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC40.42■■■■■ 4.06
TnrQ8BYI9 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC40.38■■■■■ 4.06
TnrQ8BYI9 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC40.38■■■■■ 4.05
TnrQ8BYI9 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC40.26■■■■■ 4.04
TnrQ8BYI9 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC40.21■■■■■ 4.03
TnrQ8BYI9 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC40.16■■■■■ 4.02
TnrQ8BYI9 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC40.06■■■■■ 4
TnrQ8BYI9 Gm27325-201ENSMUST00000175467 74 ntBASIC39.97■■■■□ 3.99
TnrQ8BYI9 Gm25262-201ENSMUST00000174934 133 ntBASIC39.96■■■■□ 3.99
TnrQ8BYI9 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC39.86■■■■□ 3.97
TnrQ8BYI9 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC39.78■■■■□ 3.96
TnrQ8BYI9 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC39.69■■■■□ 3.94
TnrQ8BYI9 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC39.58■■■■□ 3.93
TnrQ8BYI9 Psd-208ENSMUST00000224556 2034 ntBASIC39.58■■■■□ 3.93
TnrQ8BYI9 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC39.45■■■■□ 3.91
TnrQ8BYI9 Rab21-202ENSMUST00000218831 843 ntBASIC39.45■■■■□ 3.91
TnrQ8BYI9 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC39.34■■■■□ 3.89
TnrQ8BYI9 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC39.31■■■■□ 3.88
TnrQ8BYI9 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC39.3■■■■□ 3.88
TnrQ8BYI9 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC39.26■■■■□ 3.88
TnrQ8BYI9 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC39.21■■■■□ 3.87
TnrQ8BYI9 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC39.13■■■■□ 3.85
TnrQ8BYI9 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC39.11■■■■□ 3.85
TnrQ8BYI9 Gm26115-201ENSMUST00000175605 87 ntBASIC39.08■■■■□ 3.85
TnrQ8BYI9 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC39.05■■■■□ 3.84
TnrQ8BYI9 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC39.02■■■■□ 3.84
TnrQ8BYI9 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC39■■■■□ 3.83
TnrQ8BYI9 Gm8109-201ENSMUST00000194076 746 ntBASIC38.9■■■■□ 3.82
TnrQ8BYI9 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC38.9■■■■□ 3.82
TnrQ8BYI9 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC38.88■■■■□ 3.81
TnrQ8BYI9 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC38.86■■■■□ 3.81
TnrQ8BYI9 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC38.81■■■■□ 3.8
TnrQ8BYI9 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC38.8■■■■□ 3.8
TnrQ8BYI9 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC38.76■■■■□ 3.8
TnrQ8BYI9 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
TnrQ8BYI9 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC38.68■■■■□ 3.78
TnrQ8BYI9 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC38.66■■■■□ 3.78
TnrQ8BYI9 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC38.63■■■■□ 3.78
TnrQ8BYI9 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC38.62■■■■□ 3.77
TnrQ8BYI9 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC38.57■■■■□ 3.77
TnrQ8BYI9 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC38.55■■■■□ 3.76
TnrQ8BYI9 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC38.54■■■■□ 3.76
TnrQ8BYI9 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC38.51■■■■□ 3.75
TnrQ8BYI9 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC38.39■■■■□ 3.74
TnrQ8BYI9 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC38.33■■■■□ 3.73
TnrQ8BYI9 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC38.26■■■■□ 3.72
TnrQ8BYI9 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC38.25■■■■□ 3.71
TnrQ8BYI9 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC38.21■■■■□ 3.71
TnrQ8BYI9 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
TnrQ8BYI9 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
TnrQ8BYI9 Gm17082-201ENSMUST00000166043 1091 ntBASIC38.17■■■■□ 3.7
TnrQ8BYI9 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC38.15■■■■□ 3.7
TnrQ8BYI9 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC38.13■■■■□ 3.69
TnrQ8BYI9 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC38.13■■■■□ 3.69
TnrQ8BYI9 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC37.99■■■■□ 3.67
TnrQ8BYI9 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC37.98■■■■□ 3.67
TnrQ8BYI9 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC37.91■■■■□ 3.66
TnrQ8BYI9 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC37.89■■■■□ 3.66
TnrQ8BYI9 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC37.87■■■■□ 3.65
TnrQ8BYI9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC37.86■■■■□ 3.65
TnrQ8BYI9 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC37.83■■■■□ 3.65
TnrQ8BYI9 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC37.74■■■■□ 3.63
TnrQ8BYI9 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC37.74■■■■□ 3.63
TnrQ8BYI9 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC37.73■■■■□ 3.63
TnrQ8BYI9 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC37.72■■■■□ 3.63
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms