RNA–Protein interactions for RNA: YPR010C

RPA135, Transcript of RNA polymerase I second largest subunit A135, yeastyeast

Gene RPA135, Length 3,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPA135YPR010C ORC6P38826 435 aa3.8□□□□□ -1.8
RPA135YPR010C HGH1P48362 394 aaKnown RBP3.8□□□□□ -1.8
RPA135YPR010C VPS4P52917 437 aa3.8□□□□□ -1.8
RPA135YPR010C SSF2Q12153 453 aaPredicted RBP3.8□□□□□ -1.8
RPA135YPR010C STB3Q12427 513 aa3.8□□□□□ -1.8
RPA135YPR010C LYS2P07702 1392 aa3.79□□□□□ -1.8
RPA135YPR010C CIT2P08679 460 aa3.79□□□□□ -1.8
RPA135YPR010C FRS2P15625 503 aaKnown RBP3.79□□□□□ -1.8
RPA135YPR010C VID27P40157 782 aa3.79□□□□□ -1.8
RPA135YPR010C FYV10P40492 516 aa3.79□□□□□ -1.8
RPA135YPR010C EPS1P40557 701 aa3.79□□□□□ -1.8
RPA135YPR010C CIT1P00890 479 aa3.79□□□□□ -1.8
RPA135YPR010C GPA1P08539 472 aa3.79□□□□□ -1.8
RPA135YPR010C FBP26P32604 452 aa3.79□□□□□ -1.8
RPA135YPR010C YKU70P32807 602 aa3.79□□□□□ -1.8
RPA135YPR010C BDF1P35817 686 aa3.79□□□□□ -1.8
RPA135YPR010C MAL33P38157 468 aa3.79□□□□□ -1.8
RPA135YPR010C HAL5P38970 855 aaKnown RBP3.79□□□□□ -1.8
RPA135YPR010C YIR014WP40570 242 aa3.79□□□□□ -1.8
RPA135YPR010C CTR9P89105 1077 aa3.79□□□□□ -1.8
RPA135YPR010C AFT2Q08957 416 aa3.79□□□□□ -1.8
RPA135YPR010C YOR111WQ99210 232 aa3.79□□□□□ -1.8
RPA135YPR010C RRP5Q05022 1729 aaKnown RBP3.79□□□□□ -1.8
RPA135YPR010C CDC37P06101 506 aaKnown RBP3.78□□□□□ -1.8
RPA135YPR010C PIF1P07271 859 aa3.78□□□□□ -1.8
RPA135YPR010C RET1P22276 1149 aaKnown RBP3.78□□□□□ -1.8
RPA135YPR010C RPL8BP29453 256 aaKnown RBP3.78□□□□□ -1.8
RPA135YPR010C SAP190P36123 1033 aa3.78□□□□□ -1.8
RPA135YPR010C RKM3P38222 552 aa3.78□□□□□ -1.8
RPA135YPR010C YFH7P43591 353 aa3.78□□□□□ -1.8
RPA135YPR010C SYF1Q04048 859 aaPredicted RBP3.78□□□□□ -1.8
RPA135YPR010C SPN1Q06505 410 aaPredicted RBP3.78□□□□□ -1.8
RPA135YPR010C TIF1P10081 395 aaKnown RBP3.78□□□□□ -1.8
RPA135YPR010C CYC8P14922 966 aa3.78□□□□□ -1.8
RPA135YPR010C AIM9P40053 627 aaKnown RBP3.78□□□□□ -1.8
RPA135YPR010C CIR1P42940 261 aa3.78□□□□□ -1.8
RPA135YPR010C TFC6Q06339 672 aa3.78□□□□□ -1.8
RPA135YPR010C TAH18Q12181 623 aa3.78□□□□□ -1.8
RPA135YPR010C PET123P17558 318 aa3.78□□□□□ -1.8
RPA135YPR010C GAP1P19145 602 aaPredicted RBP3.78□□□□□ -1.8
RPA135YPR010C PUP1P25043 261 aa3.78□□□□□ -1.8
RPA135YPR010C PWP2P25635 923 aaKnown RBP3.78□□□□□ -1.8
RPA135YPR010C KRE2P27809 442 aa3.78□□□□□ -1.8
RPA135YPR010C CBF2P32504 956 aa3.78□□□□□ -1.8
RPA135YPR010C SLI15P38283 698 aa3.78□□□□□ -1.8
RPA135YPR010C TPM2P40414 161 aa3.78□□□□□ -1.8
RPA135YPR010C LSP1Q12230 341 aaKnown RBP3.78□□□□□ -1.8
RPA135YPR010C VPS1P21576 704 aaKnown RBP3.77□□□□□ -1.81
RPA135YPR010C SPL2P38839 148 aa3.77□□□□□ -1.81
RPA135YPR010C RTT107P38850 1070 aa3.77□□□□□ -1.81
RPA135YPR010C SPO22P40511 975 aa3.77□□□□□ -1.81
RPA135YPR010C YJL007CP47080 104 aa3.77□□□□□ -1.81
RPA135YPR010C RSM7P47150 247 aa3.77□□□□□ -1.81
RPA135YPR010C GIR2Q03768 265 aaPredicted RBP3.77□□□□□ -1.81
RPA135YPR010C YDL121CQ07541 149 aa3.77□□□□□ -1.81
RPA135YPR010C GAS5Q08193 484 aa3.77□□□□□ -1.81
RPA135YPR010C ETT1Q08421 412 aaKnown RBP3.77□□□□□ -1.81
RPA135YPR010C WHI5Q12416 295 aa3.77□□□□□ -1.81
RPA135YPR010C CDC48P25694 835 aaKnown RBP3.77□□□□□ -1.81
RPA135YPR010C PSO2P30620 661 aa3.77□□□□□ -1.81
RPA135YPR010C YKR023WP36119 530 aaKnown RBP3.77□□□□□ -1.81
RPA135YPR010C YBL028CP38202 106 aa3.77□□□□□ -1.81
RPA135YPR010C OSH3P38713 996 aaKnown RBP3.77□□□□□ -1.81
RPA135YPR010C LAP2Q10740 671 aa3.77□□□□□ -1.81
RPA135YPR010C ANP1P32629 500 aa3.77□□□□□ -1.81
RPA135YPR010C CSM2P40465 213 aa3.77□□□□□ -1.81
RPA135YPR010C SET4P42948 560 aa3.77□□□□□ -1.81
RPA135YPR010C RPS15Q01855 142 aaKnown RBP3.77□□□□□ -1.81
RPA135YPR010C PRP42Q03776 544 aaKnown RBP3.77□□□□□ -1.81
RPA135YPR010C TRS120Q04183 1289 aa3.77□□□□□ -1.81
RPA135YPR010C YDR341CQ05506 607 aaKnown RBP3.77□□□□□ -1.81
RPA135YPR010C DIB1Q06819 143 aaPredicted RBP3.77□□□□□ -1.81
RPA135YPR010C PSK2Q08217 1101 aa3.77□□□□□ -1.81
RPA135YPR010C PPM2Q08282 695 aa3.77□□□□□ -1.81
RPA135YPR010C VMA4P22203 233 aaKnown RBP3.76□□□□□ -1.81
RPA135YPR010C GSY1P23337 708 aa3.76□□□□□ -1.81
RPA135YPR010C SSD1P24276 1250 aaKnown RBP RIP-Chip data3.76□□□□□ -1.81not detected
RPA135YPR010C SEC65P29478 273 aa3.76□□□□□ -1.81
RPA135YPR010C CDC3P32457 520 aaKnown RBP3.76□□□□□ -1.81
RPA135YPR010C NPR3P38742 1146 aa3.76□□□□□ -1.81
RPA135YPR010C BDH2P39713 417 aa3.76□□□□□ -1.81
RPA135YPR010C YER156CP40093 338 aaKnown RBP3.76□□□□□ -1.81
RPA135YPR010C TY4A-JP47023 414 aa3.76□□□□□ -1.81
RPA135YPR010C UTP22P53254 1237 aaPredicted RBP3.76□□□□□ -1.81
RPA135YPR010C YGR273CP53329 174 aa3.76□□□□□ -1.81
RPA135YPR010C YDL124WQ07551 312 aaKnown RBP3.76□□□□□ -1.81
RPA135YPR010C KRS1P15180 591 aaKnown RBP3.76□□□□□ -1.81
RPA135YPR010C SSA4P22202 642 aaKnown RBP3.76□□□□□ -1.81
RPA135YPR010C TSR4P25040 408 aa3.76□□□□□ -1.81
RPA135YPR010C PRO3P32263 286 aaKnown RBP3.76□□□□□ -1.81
RPA135YPR010C SRP40P32583 406 aaPredicted RBP3.76□□□□□ -1.81
RPA135YPR010C SAS3P34218 831 aa3.76□□□□□ -1.81
RPA135YPR010C MAL31P38156 614 aa3.76□□□□□ -1.81
RPA135YPR010C SAP1P39955 897 aaKnown RBP3.76□□□□□ -1.81
RPA135YPR010C AIM33Q04516 312 aa3.76□□□□□ -1.81
RPA135YPR010C RRP6Q12149 733 aaKnown RBP3.76□□□□□ -1.81
RPA135YPR010C LAM4P38800 1345 aa3.76□□□□□ -1.81
RPA135YPR010C POM152P39685 1337 aa3.76□□□□□ -1.81
RPA135YPR010C JIP3O13555 125 aa3.76□□□□□ -1.81
RPA135YPR010C CDC6P09119 513 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms