RNA–Protein interactions for RNA: YPL260W

YPL260W, Transcript of Putative substrate of cAMP-dependent protein kinase (PKA), yeast

Gene YPL260W, Length 1,656 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPL260W	YPL260W	NUP120	P35729	1037 aa		4.86	□□□□□ -1.63
YPL260W	YPL260W	ECM4	P36156	370 aa		4.86	□□□□□ -1.63
YPL260W	YPL260W	OSH3	P38713	996 aa	Known RBP	4.86	□□□□□ -1.63
YPL260W	YPL260W	NUP60	P39705	539 aa		4.86	□□□□□ -1.63
YPL260W	YPL260W	GPD2	P41911	440 aa	Known RBP	4.86	□□□□□ -1.63
YPL260W	YPL260W	BNI5	P53890	448 aa	Known RBP	4.86	□□□□□ -1.63
YPL260W	YPL260W	HEH2	Q03281	663 aa		4.86	□□□□□ -1.63
YPL260W	YPL260W	YMR111C	Q04461	462 aa	Predicted RBP	4.86	□□□□□ -1.63
YPL260W	YPL260W	DPL1	Q05567	589 aa		4.86	□□□□□ -1.63
YPL260W	YPL260W	PDR11	P40550	1411 aa		4.86	□□□□□ -1.63
YPL260W	YPL260W	TY1B-DR3	Q99231	1755 aa		4.85	□□□□□ -1.63
YPL260W	YPL260W	ADE3	P07245	946 aa	Known RBP	4.85	□□□□□ -1.63
YPL260W	YPL260W	SES1	P07284	462 aa	Known RBP	4.85	□□□□□ -1.63
YPL260W	YPL260W	PDR1	P12383	1068 aa		4.85	□□□□□ -1.63
YPL260W	YPL260W	ATE1	P16639	503 aa		4.85	□□□□□ -1.63
YPL260W	YPL260W	KCC4	P25389	1037 aa		4.85	□□□□□ -1.63
YPL260W	YPL260W	DPB3	P27344	201 aa		4.85	□□□□□ -1.63
YPL260W	YPL260W	PDB1	P32473	366 aa	Known RBP	4.85	□□□□□ -1.63
YPL260W	YPL260W	HSP78	P33416	811 aa		4.85	□□□□□ -1.63
YPL260W	YPL260W	MRP8	P35719	219 aa		4.85	□□□□□ -1.63
YPL260W	YPL260W	AMN1	P38285	549 aa	Predicted RBP	4.85	□□□□□ -1.63
YPL260W	YPL260W	SSZ1	P38788	538 aa	Known RBP	4.85	□□□□□ -1.63
YPL260W	YPL260W	CCT5	P40413	562 aa	Known RBP	4.85	□□□□□ -1.63
YPL260W	YPL260W	YIL001W	P40560	513 aa		4.85	□□□□□ -1.63
YPL260W	YPL260W	OSW7	P43611	510 aa		4.85	□□□□□ -1.63
YPL260W	YPL260W	RTS3	P53289	263 aa		4.85	□□□□□ -1.63
YPL260W	YPL260W	COP1	P53622	1201 aa	Known RBP	4.85	□□□□□ -1.63
YPL260W	YPL260W	MEH1	Q02205	184 aa		4.85	□□□□□ -1.63
YPL260W	YPL260W	MFM1	Q02783	413 aa		4.85	□□□□□ -1.63
YPL260W	YPL260W	MAK21	Q12176	1025 aa	Known RBP	4.85	□□□□□ -1.63
YPL260W	YPL260W	CDC25	P04821	1589 aa		4.84	□□□□□ -1.63
YPL260W	YPL260W	PDR12	Q02785	1511 aa		4.84	□□□□□ -1.63
YPL260W	YPL260W	SSK22	P25390	1331 aa	Predicted RBP	4.84	□□□□□ -1.63
YPL260W	YPL260W	PET494	P07390	489 aa	Predicted RBP	4.84	□□□□□ -1.63
YPL260W	YPL260W	TYR1	P20049	452 aa		4.84	□□□□□ -1.63
YPL260W	YPL260W	RPO26	P20435	155 aa		4.84	□□□□□ -1.63
YPL260W	YPL260W	DID4	P36108	232 aa		4.84	□□□□□ -1.63
YPL260W	YPL260W	YKR018C	P36114	725 aa		4.84	□□□□□ -1.63
YPL260W	YPL260W	PTC4	P38089	393 aa		4.84	□□□□□ -1.63
YPL260W	YPL260W	ETP1	P38748	585 aa	Known RBP	4.84	□□□□□ -1.63
YPL260W	YPL260W	CCT4	P39078	528 aa	Known RBP	4.84	□□□□□ -1.63
YPL260W	YPL260W	AIM21	P40563	679 aa		4.84	□□□□□ -1.63
YPL260W	YPL260W	MAD1	P40957	749 aa		4.84	□□□□□ -1.63
YPL260W	YPL260W	CTH1	P47976	325 aa		4.84	□□□□□ -1.63
YPL260W	YPL260W	MMR1	Q06324	491 aa		4.84	□□□□□ -1.63
YPL260W	YPL260W	VAM6	Q07468	1049 aa		4.84	□□□□□ -1.63
YPL260W	YPL260W	BUD7	Q08754	746 aa		4.84	□□□□□ -1.63
YPL260W	YPL260W	SGT2	Q12118	346 aa	Known RBP	4.84	□□□□□ -1.63
YPL260W	YPL260W	RUD3	Q12234	484 aa	Known RBP	4.84	□□□□□ -1.63
YPL260W	YPL260W	DOP1	Q03921	1698 aa		4.84	□□□□□ -1.63
YPL260W	YPL260W	KRE5	P22023	1365 aa		4.83	□□□□□ -1.64
YPL260W	YPL260W	ADE6	P38972	1358 aa	Known RBP	4.83	□□□□□ -1.64
YPL260W	YPL260W	TOM70	P07213	617 aa	Known RBP	4.83	□□□□□ -1.64
YPL260W	YPL260W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.83	□□□□□ -1.64	not detected
YPL260W	YPL260W	SEC15	P22224	910 aa		4.83	□□□□□ -1.64
YPL260W	YPL260W	NFU1	P32860	256 aa		4.83	□□□□□ -1.64
YPL260W	YPL260W	VPS35	P34110	944 aa		4.83	□□□□□ -1.64
YPL260W	YPL260W	PIH1	P38768	344 aa		4.83	□□□□□ -1.64
YPL260W	YPL260W	SAK1	P38990	1142 aa		4.83	□□□□□ -1.64
YPL260W	YPL260W	YHB1	P39676	399 aa	Known RBP	4.83	□□□□□ -1.64
YPL260W	YPL260W	SAP185	P40856	1058 aa		4.83	□□□□□ -1.64
YPL260W	YPL260W	TFG2	P41896	400 aa	Predicted RBP	4.83	□□□□□ -1.64
YPL260W	YPL260W	SAP155	P43612	1002 aa		4.83	□□□□□ -1.64
YPL260W	YPL260W	ENP2	P48234	707 aa	Known RBP	4.83	□□□□□ -1.64
YPL260W	YPL260W	TPO2	P53283	614 aa		4.83	□□□□□ -1.64
YPL260W	YPL260W	RBA50	Q04418	439 aa		4.83	□□□□□ -1.64
YPL260W	YPL260W	MPC54	Q08550	464 aa		4.83	□□□□□ -1.64
YPL260W	YPL260W	MET7	Q08645	548 aa		4.83	□□□□□ -1.64
YPL260W	YPL260W	YPR089W	O13585	888 aa		4.83	□□□□□ -1.64
YPL260W	YPL260W	REP1	P03871	373 aa		4.83	□□□□□ -1.64
YPL260W	YPL260W	ADH4	P10127	382 aa		4.83	□□□□□ -1.64
YPL260W	YPL260W	ADE2	P21264	571 aa	Known RBP	4.83	□□□□□ -1.64
YPL260W	YPL260W	SSA4	P22202	642 aa	Known RBP	4.83	□□□□□ -1.64
YPL260W	YPL260W	RPC34	P32910	317 aa		4.83	□□□□□ -1.64
YPL260W	YPL260W	CAJ1	P39101	391 aa		4.83	□□□□□ -1.64
YPL260W	YPL260W	UBP12	P39538	1254 aa		4.83	□□□□□ -1.64
YPL260W	YPL260W	MDJ2	P42834	146 aa		4.83	□□□□□ -1.64
YPL260W	YPL260W	IOC3	P43596	787 aa		4.83	□□□□□ -1.64
YPL260W	YPL260W	TY4A-J	P47023	414 aa		4.83	□□□□□ -1.64
YPL260W	YPL260W	PRP43	P53131	767 aa	Known RBP	4.83	□□□□□ -1.64
YPL260W	YPL260W	TAF8	Q03750	510 aa		4.83	□□□□□ -1.64
YPL260W	YPL260W	RSC2	Q06488	889 aa		4.83	□□□□□ -1.64
YPL260W	YPL260W	IES3	Q12345	250 aa		4.83	□□□□□ -1.64
YPL260W	YPL260W	SNT2	P53127	1403 aa		4.82	□□□□□ -1.64
YPL260W	YPL260W	SSO1	P32867	290 aa		4.82	□□□□□ -1.64
YPL260W	YPL260W	YRO2	P38079	344 aa		4.82	□□□□□ -1.64
YPL260W	YPL260W	UBP13	P38187	747 aa		4.82	□□□□□ -1.64
YPL260W	YPL260W	YBR242W	P38331	238 aa		4.82	□□□□□ -1.64
YPL260W	YPL260W	YEL023C	P39992	682 aa		4.82	□□□□□ -1.64
YPL260W	YPL260W	VID27	P40157	782 aa		4.82	□□□□□ -1.64
YPL260W	YPL260W	HUL4	P40985	892 aa		4.82	□□□□□ -1.64
YPL260W	YPL260W	STB1	P42845	420 aa		4.82	□□□□□ -1.64
YPL260W	YPL260W	TRS85	P46944	698 aa		4.82	□□□□□ -1.64
YPL260W	YPL260W	POL31	P46957	487 aa		4.82	□□□□□ -1.64
YPL260W	YPL260W	ARI1	P53111	347 aa	Known RBP	4.82	□□□□□ -1.64
YPL260W	YPL260W	SSL2	Q00578	843 aa		4.82	□□□□□ -1.64
YPL260W	YPL260W	CEF1	Q03654	590 aa	Predicted RBP	4.82	□□□□□ -1.64
YPL260W	YPL260W	YKU80	Q04437	629 aa		4.82	□□□□□ -1.64
YPL260W	YPL260W	YOR223W	Q12015	292 aa		4.82	□□□□□ -1.64
YPL260W	YPL260W	TY2B-LR1	P0C2J3	1770 aa		4.81	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms