RNA–Protein interactions for RNA: YPL211W

NIP7, Transcript of Nucleolar protein required for 60S ribosome subunit biogenesis, yeastyeast

Gene NIP7, Length 546 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP7YPL211W YMR074CQ04773 145 aa5.44□□□□□ -1.54
NIP7YPL211W SKI3P17883 1432 aaKnown RBP5.43□□□□□ -1.54
NIP7YPL211W AKR1P39010 764 aa5.43□□□□□ -1.54
NIP7YPL211W SEN54Q02825 467 aaPredicted RBP5.43□□□□□ -1.54
NIP7YPL211W REC8Q12188 680 aa5.43□□□□□ -1.54
NIP7YPL211W PHO4P07270 312 aaKnown RBP5.42□□□□□ -1.54
NIP7YPL211W CIC1P38779 376 aaKnown RBP5.42□□□□□ -1.54
NIP7YPL211W MYO2P19524 1574 aaKnown RBP5.42□□□□□ -1.54
NIP7YPL211W HTS1P07263 546 aaKnown RBP5.41□□□□□ -1.54
NIP7YPL211W PRP5P21372 849 aaPredicted RBP5.41□□□□□ -1.54
NIP7YPL211W SEC20P28791 383 aa5.41□□□□□ -1.54
NIP7YPL211W COQ2P32378 372 aa5.41□□□□□ -1.54
NIP7YPL211W PGM1P33401 570 aaKnown RBP5.41□□□□□ -1.54
NIP7YPL211W DAK2P43550 591 aa5.41□□□□□ -1.54
NIP7YPL211W SAP155P43612 1002 aa5.41□□□□□ -1.54
NIP7YPL211W NCE103P53615 221 aa5.41□□□□□ -1.54
NIP7YPL211W YAF9P53930 226 aa5.41□□□□□ -1.54
NIP7YPL211W PMT7Q06644 662 aa5.41□□□□□ -1.54
NIP7YPL211W UGA4P32837 571 aa5.4□□□□□ -1.54
NIP7YPL211W FAR11P53917 953 aa5.4□□□□□ -1.54
NIP7YPL211W YCS4Q06156 1176 aa5.4□□□□□ -1.54
NIP7YPL211W TOS4Q06266 489 aa5.4□□□□□ -1.54
NIP7YPL211W GCD6P32501 712 aaKnown RBP5.39□□□□□ -1.55
NIP7YPL211W RVS167P39743 482 aaKnown RBP5.39□□□□□ -1.55
NIP7YPL211W DAL4Q04895 635 aa5.39□□□□□ -1.55
NIP7YPL211W YIG1Q08956 461 aa5.39□□□□□ -1.55
NIP7YPL211W RPT1P33299 467 aaKnown RBP5.38□□□□□ -1.55
NIP7YPL211W VPS35P34110 944 aa5.38□□□□□ -1.55
NIP7YPL211W SLD2P34252 453 aa5.38□□□□□ -1.55
NIP7YPL211W UTP22P53254 1237 aaPredicted RBP5.38□□□□□ -1.55
NIP7YPL211W ALO1P54783 526 aaKnown RBP5.38□□□□□ -1.55
NIP7YPL211W PUF3Q07807 879 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
NIP7YPL211W ALG6Q12001 544 aaKnown RBP5.38□□□□□ -1.55
NIP7YPL211W YLR122CQ12312 125 aa5.38□□□□□ -1.55
NIP7YPL211W TY1A-LR4P0C2I8 440 aaKnown RBP5.37□□□□□ -1.55
NIP7YPL211W TY1A-DR6P0CX70 440 aa5.37□□□□□ -1.55
NIP7YPL211W TY1A-ER1P0CX71 440 aa5.37□□□□□ -1.55
NIP7YPL211W TY1A-LR2P0CX72 440 aa5.37□□□□□ -1.55
NIP7YPL211W TY1A-PLP0CX73 440 aa5.37□□□□□ -1.55
NIP7YPL211W TY1A-JR1P0CX74 440 aa5.37□□□□□ -1.55
NIP7YPL211W TY1A-LR3P0CX75 440 aa5.37□□□□□ -1.55
NIP7YPL211W TY1A-ML2P0CX76 440 aa5.37□□□□□ -1.55
NIP7YPL211W PRP40P33203 583 aaKnown RBP5.37□□□□□ -1.55
NIP7YPL211W SAF1P38352 637 aa5.37□□□□□ -1.55
NIP7YPL211W GCV1P48015 400 aa5.37□□□□□ -1.55
NIP7YPL211W YOR223WQ12015 292 aa5.37□□□□□ -1.55
NIP7YPL211W TY1A-GR1Q12085 440 aa5.37□□□□□ -1.55
NIP7YPL211W TY1A-PR3Q6Q5H1 440 aaKnown RBP5.37□□□□□ -1.55
NIP7YPL211W TY1A-OLQ92392 440 aaKnown RBP5.37□□□□□ -1.55
NIP7YPL211W YPK9Q12697 1472 aa5.37□□□□□ -1.55
NIP7YPL211W KAE1P36132 386 aa5.36□□□□□ -1.55
NIP7YPL211W GPT2P36148 743 aa5.36□□□□□ -1.55
NIP7YPL211W DOT1Q04089 582 aaKnown RBP5.36□□□□□ -1.55
NIP7YPL211W BPT1P14772 1559 aa5.36□□□□□ -1.55
NIP7YPL211W TRP3P00937 484 aa5.35□□□□□ -1.55
NIP7YPL211W CHS2P14180 963 aa5.35□□□□□ -1.55
NIP7YPL211W REI1P38344 393 aaPredicted RBP5.35□□□□□ -1.55
NIP7YPL211W YGR130CP53278 816 aa5.35□□□□□ -1.55
NIP7YPL211W PEX13P80667 386 aa5.35□□□□□ -1.55
NIP7YPL211W MEC3Q02574 474 aa5.35□□□□□ -1.55
NIP7YPL211W NOP8Q08287 484 aaPredicted RBP5.35□□□□□ -1.55
NIP7YPL211W OXR1Q08952 273 aa5.35□□□□□ -1.55
NIP7YPL211W YKL077WP36081 392 aa5.34□□□□□ -1.55
NIP7YPL211W EXO5P38289 585 aa5.34□□□□□ -1.55
NIP7YPL211W FAA3P39002 694 aa5.34□□□□□ -1.55
NIP7YPL211W SLS1P42900 643 aa5.34□□□□□ -1.55
NIP7YPL211W ULP1Q02724 621 aa5.34□□□□□ -1.55
NIP7YPL211W GIC2Q06648 383 aa5.34□□□□□ -1.55
NIP7YPL211W YLL054CQ12244 843 aa5.34□□□□□ -1.55
NIP7YPL211W SCC2Q04002 1493 aa5.33□□□□□ -1.56
NIP7YPL211W YKR073CP36153 106 aa5.33□□□□□ -1.56
NIP7YPL211W POL32P47110 350 aa5.33□□□□□ -1.56
NIP7YPL211W RSM26P47141 266 aa5.33□□□□□ -1.56
NIP7YPL211W UFD4P33202 1483 aa5.32□□□□□ -1.56
NIP7YPL211W ATE1P16639 503 aa5.32□□□□□ -1.56
NIP7YPL211W MSH3P25336 1018 aa5.32□□□□□ -1.56
NIP7YPL211W SQT1P35184 431 aa5.32□□□□□ -1.56
NIP7YPL211W MAC1P35192 417 aa5.32□□□□□ -1.56
NIP7YPL211W OMA1P36163 345 aa5.32□□□□□ -1.56
NIP7YPL211W ELA1P53861 379 aaPredicted RBP5.32□□□□□ -1.56
NIP7YPL211W KAR2P16474 682 aaKnown RBP5.31□□□□□ -1.56
NIP7YPL211W WHI3P34761 661 aaKnown RBP5.31□□□□□ -1.56
NIP7YPL211W NEM1P38757 446 aa5.31□□□□□ -1.56
NIP7YPL211W SHU2P38957 223 aa5.31□□□□□ -1.56
NIP7YPL211W YGR045CP53229 120 aa5.31□□□□□ -1.56
NIP7YPL211W MED7Q08278 222 aa5.31□□□□□ -1.56
NIP7YPL211W TOS1P38288 455 aa5.3□□□□□ -1.56
NIP7YPL211W PEX28P38848 579 aa5.3□□□□□ -1.56
NIP7YPL211W SPO74P45819 413 aa5.3□□□□□ -1.56
NIP7YPL211W NRD1P53617 575 aaKnown RBP RIP-Chip data5.3□□□□□ -1.56not detected
NIP7YPL211W NOG1Q02892 647 aaKnown RBP5.3□□□□□ -1.56
NIP7YPL211W AVO1Q08236 1176 aa5.3□□□□□ -1.56
NIP7YPL211W RPO31P04051 1460 aa5.3□□□□□ -1.56
NIP7YPL211W CYC7P00045 113 aa5.29□□□□□ -1.56
NIP7YPL211W HXK1P04806 485 aaKnown RBP5.29□□□□□ -1.56
NIP7YPL211W MCM2P29469 868 aa5.29□□□□□ -1.56
NIP7YPL211W MSH4P40965 878 aaPredicted RBP5.29□□□□□ -1.56
NIP7YPL211W YPL109CQ02981 657 aa5.29□□□□□ -1.56
NIP7YPL211W YCF1P39109 1515 aaKnown RBP5.28□□□□□ -1.56
NIP7YPL211W RPS4AP0CX35 261 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 66.9 ms