RNA–Protein interactions for RNA: YPL058C

PDR12, Transcript of Plasma membrane ATP-binding cassette (ABC) transporter, yeast

Gene PDR12, Length 4,536 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR12	YPL058C	PTC3	P34221	468 aa	Known RBP	4.58	□□□□□ -1.68
PDR12	YPL058C	YBR287W	P38355	427 aa		4.58	□□□□□ -1.68
PDR12	YPL058C	SPO1	P53541	631 aa		4.58	□□□□□ -1.68
PDR12	YPL058C	RAD53	P22216	821 aa		4.58	□□□□□ -1.68
PDR12	YPL058C	BRL1	P38770	471 aa		4.58	□□□□□ -1.68
PDR12	YPL058C	CYB2	P00175	591 aa		4.58	□□□□□ -1.68
PDR12	YPL058C	MGM1	P32266	881 aa		4.57	□□□□□ -1.68
PDR12	YPL058C	MUM2	P38236	366 aa		4.57	□□□□□ -1.68
PDR12	YPL058C	AIM21	P40563	679 aa		4.57	□□□□□ -1.68
PDR12	YPL058C	LCD1	Q04377	747 aa		4.57	□□□□□ -1.68
PDR12	YPL058C	KEL3	Q08979	651 aa	Predicted RBP	4.57	□□□□□ -1.68
PDR12	YPL058C	GCN2	P15442	1659 aa		4.57	□□□□□ -1.68
PDR12	YPL058C	NTH2	P35172	780 aa		4.57	□□□□□ -1.68
PDR12	YPL058C	PBY1	P38254	753 aa		4.57	□□□□□ -1.68
PDR12	YPL058C	YBR238C	P38330	731 aa	Known RBP	4.57	□□□□□ -1.68
PDR12	YPL058C	YNL134C	P53912	376 aa	Known RBP	4.57	□□□□□ -1.68
PDR12	YPL058C	YOL057W	Q08225	711 aa		4.57	□□□□□ -1.68
PDR12	YPL058C	TRP2	P00899	507 aa	Known RBP	4.57	□□□□□ -1.68
PDR12	YPL058C	NMD3	P38861	518 aa	Known RBP	4.57	□□□□□ -1.68
PDR12	YPL058C	VID27	P40157	782 aa		4.57	□□□□□ -1.68
PDR12	YPL058C	SGM1	P47166	707 aa		4.57	□□□□□ -1.68
PDR12	YPL058C	YML083C	Q04526	418 aa		4.57	□□□□□ -1.68
PDR12	YPL058C	RAD2	P07276	1031 aa		4.56	□□□□□ -1.68
PDR12	YPL058C	RTG3	P38165	486 aa		4.56	□□□□□ -1.68
PDR12	YPL058C	CSM3	Q04659	317 aa		4.56	□□□□□ -1.68
PDR12	YPL058C	PIG1	Q06216	648 aa		4.56	□□□□□ -1.68
PDR12	YPL058C	THI3	Q07471	609 aa		4.56	□□□□□ -1.68
PDR12	YPL058C	BRN1	P38170	754 aa		4.56	□□□□□ -1.68
PDR12	YPL058C	SHQ1	P40486	507 aa	Predicted RBP	4.56	□□□□□ -1.68
PDR12	YPL058C	GYP8	P43570	497 aa		4.56	□□□□□ -1.68
PDR12	YPL058C	WRS1	Q12109	432 aa	Known RBP	4.56	□□□□□ -1.68
PDR12	YPL058C	MRPL7	P36519	292 aa		4.56	□□□□□ -1.68
PDR12	YPL058C	PUP3	P25451	205 aa	Known RBP	4.56	□□□□□ -1.68
PDR12	YPL058C	RAD54	P32863	898 aa		4.56	□□□□□ -1.68
PDR12	YPL058C	SKG6	P32900	734 aa	Predicted RBP	4.56	□□□□□ -1.68
PDR12	YPL058C	TFC4	P33339	1025 aa		4.56	□□□□□ -1.68
PDR12	YPL058C	UBP16	Q02863	499 aa		4.56	□□□□□ -1.68
PDR12	YPL058C	SAH1	P39954	449 aa	Known RBP	4.55	□□□□□ -1.68
PDR12	YPL058C	ALD6	P54115	500 aa	Known RBP	4.55	□□□□□ -1.68
PDR12	YPL058C	ISA1	Q07821	250 aa	Predicted RBP	4.55	□□□□□ -1.68
PDR12	YPL058C	MOB1	P40484	314 aa		4.55	□□□□□ -1.68
PDR12	YPL058C	PTK2	P47116	818 aa	Known RBP	4.54	□□□□□ -1.68
PDR12	YPL058C	FOL2	P51601	243 aa	Known RBP	4.54	□□□□□ -1.68
PDR12	YPL058C	BDP1	P46678	594 aa		4.54	□□□□□ -1.68
PDR12	YPL058C	YRB30	P53107	440 aa	Predicted RBP	4.54	□□□□□ -1.68
PDR12	YPL058C	PDR18	P53756	1333 aa		4.54	□□□□□ -1.68
PDR12	YPL058C	YRF1-2	P40105	1681 aa		4.54	□□□□□ -1.68
PDR12	YPL058C	SHE3	P38272	425 aa	Known RBP	4.54	□□□□□ -1.68
PDR12	YPL058C	DAK1	P54838	584 aa	Known RBP	4.54	□□□□□ -1.68
PDR12	YPL058C	SMC5	Q08204	1093 aa		4.54	□□□□□ -1.68
PDR12	YPL058C	SSF2	Q12153	453 aa	Predicted RBP	4.54	□□□□□ -1.68
PDR12	YPL058C	OSW2	Q12202	724 aa		4.54	□□□□□ -1.68
PDR12	YPL058C	PHR1	P05066	565 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
PDR12	YPL058C	RPS7A	P26786	190 aa	Known RBP	4.53	□□□□□ -1.68
PDR12	YPL058C	ZPR1	P53303	486 aa	Known RBP	4.53	□□□□□ -1.68
PDR12	YPL058C	CWC21	Q03375	135 aa	Known RBP	4.53	□□□□□ -1.68
PDR12	YPL058C	VAS1	P07806	1104 aa	Known RBP	4.53	□□□□□ -1.68
PDR12	YPL058C	VPH1	P32563	840 aa	Known RBP	4.53	□□□□□ -1.68
PDR12	YPL058C	YNR061C	P53747	219 aa		4.53	□□□□□ -1.68
PDR12	YPL058C	YCG1	Q06680	1035 aa		4.53	□□□□□ -1.68
PDR12	YPL058C	DAP1	Q12091	152 aa		4.53	□□□□□ -1.68
PDR12	YPL058C	RPL8A	P17076	256 aa	Known RBP	4.53	□□□□□ -1.68
PDR12	YPL058C	GRS1	P38088	690 aa	Known RBP	4.53	□□□□□ -1.68
PDR12	YPL058C	NPA3	P47122	385 aa		4.53	□□□□□ -1.68
PDR12	YPL058C	PIB2	P53191	635 aa		4.53	□□□□□ -1.68
PDR12	YPL058C	NBL1	Q3E7Y6	73 aa		4.53	□□□□□ -1.68
PDR12	YPL058C	CAF20	P12962	161 aa	Known RBP	4.53	□□□□□ -1.69
PDR12	YPL058C	PSE1	P32337	1089 aa	Known RBP	4.53	□□□□□ -1.69
PDR12	YPL058C	ATG19	P35193	415 aa		4.53	□□□□□ -1.69
PDR12	YPL058C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.69	not detected
PDR12	YPL058C	SAC3	P46674	1301 aa		4.52	□□□□□ -1.69
PDR12	YPL058C	FYV10	P40492	516 aa		4.52	□□□□□ -1.69
PDR12	YPL058C	KRI1	P42846	591 aa	Known RBP	4.52	□□□□□ -1.69
PDR12	YPL058C	SLD5	Q03406	294 aa		4.52	□□□□□ -1.69
PDR12	YPL058C	LAP2	Q10740	671 aa		4.52	□□□□□ -1.69
PDR12	YPL058C	HMG2	P12684	1045 aa		4.52	□□□□□ -1.69
PDR12	YPL058C	NOC2	P39744	710 aa	Known RBP	4.52	□□□□□ -1.69
PDR12	YPL058C	MSC2	Q03455	724 aa		4.52	□□□□□ -1.69
PDR12	YPL058C	VPS3	P23643	1011 aa		4.52	□□□□□ -1.69
PDR12	YPL058C	JJJ3	P47138	172 aa		4.52	□□□□□ -1.69
PDR12	YPL058C	ESC8	Q08119	714 aa		4.52	□□□□□ -1.69
PDR12	YPL058C	DCD1	P06773	312 aa		4.51	□□□□□ -1.69
PDR12	YPL058C	PTK1	P36002	662 aa	Predicted RBP	4.51	□□□□□ -1.69
PDR12	YPL058C	MAP2	P38174	421 aa	Known RBP	4.51	□□□□□ -1.69
PDR12	YPL058C	SKP2	P42843	763 aa		4.51	□□□□□ -1.69
PDR12	YPL058C	MLC1	P53141	149 aa		4.51	□□□□□ -1.69
PDR12	YPL058C	VPS72	Q03388	795 aa		4.51	□□□□□ -1.69
PDR12	YPL058C	YML037C	Q03703	340 aa		4.51	□□□□□ -1.69
PDR12	YPL058C	PTP1	P25044	335 aa		4.51	□□□□□ -1.69
PDR12	YPL058C	SEC21	P32074	935 aa	Known RBP	4.51	□□□□□ -1.69
PDR12	YPL058C	IRC8	P47046	822 aa		4.51	□□□□□ -1.69
PDR12	YPL058C	ITC1	P53125	1264 aa		4.51	□□□□□ -1.69
PDR12	YPL058C	CLU1	Q03690	1277 aa	Known RBP	4.51	□□□□□ -1.69
PDR12	YPL058C	YML133C	Q03099	1374 aa		4.51	□□□□□ -1.69
PDR12	YPL058C	TIF1	P10081	395 aa	Known RBP	4.51	□□□□□ -1.69
PDR12	YPL058C	UBP15	P50101	1230 aa		4.51	□□□□□ -1.69
PDR12	YPL058C	CSC1	Q06538	782 aa		4.51	□□□□□ -1.69
PDR12	YPL058C	SUT2	Q12286	268 aa		4.51	□□□□□ -1.69
PDR12	YPL058C	SWI1	P09547	1314 aa		4.51	□□□□□ -1.69
PDR12	YPL058C	LDB19	Q12502	818 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms