RNA–Protein interactions for RNA: YOL047C

LDS2, Transcript of Protein Involved in spore wall assembly, yeast

Gene LDS2, Length 1,071 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDS2	YOL047C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.29	□□□□□ -1.72	not detected
LDS2	YOL047C	GIR2	Q03768	265 aa	Predicted RBP	4.29	□□□□□ -1.72
LDS2	YOL047C	SND1	Q04007	877 aa		4.29	□□□□□ -1.72
LDS2	YOL047C	SPO20	Q04359	397 aa		4.29	□□□□□ -1.72
LDS2	YOL047C	UTP14	Q04500	899 aa	Known RBP	4.29	□□□□□ -1.72
LDS2	YOL047C	HDA3	Q06623	655 aa		4.29	□□□□□ -1.72
LDS2	YOL047C	CDC45	Q08032	650 aa		4.29	□□□□□ -1.72
LDS2	YOL047C	FAL1	Q12099	399 aa	Known RBP	4.29	□□□□□ -1.72
LDS2	YOL047C	VPS15	P22219	1454 aa		4.29	□□□□□ -1.72
LDS2	YOL047C	PDR15	Q04182	1529 aa	Known RBP	4.28	□□□□□ -1.72
LDS2	YOL047C	BAS1	P22035	811 aa		4.28	□□□□□ -1.72
LDS2	YOL047C	TRK2	P28584	889 aa		4.28	□□□□□ -1.72
LDS2	YOL047C	RIX1	P38883	763 aa	Predicted RBP	4.28	□□□□□ -1.72
LDS2	YOL047C	VPS27	P40343	622 aa	Known RBP	4.28	□□□□□ -1.72
LDS2	YOL047C	DAS1	P47005	663 aa		4.28	□□□□□ -1.72
LDS2	YOL047C	AGE1	Q04412	482 aa		4.28	□□□□□ -1.72
LDS2	YOL047C	CAB1	Q04430	367 aa		4.28	□□□□□ -1.72
LDS2	YOL047C	DAL4	Q04895	635 aa		4.28	□□□□□ -1.72
LDS2	YOL047C	NTG2	Q08214	380 aa		4.28	□□□□□ -1.72
LDS2	YOL047C	OXR1	Q08952	273 aa		4.28	□□□□□ -1.72
LDS2	YOL047C	NYV1	Q12255	253 aa		4.28	□□□□□ -1.72
LDS2	YOL047C	NOP58	Q12499	511 aa	Known RBP	4.28	□□□□□ -1.72
LDS2	YOL047C	SRF1	Q12516	437 aa		4.28	□□□□□ -1.72
LDS2	YOL047C	RPO31	P04051	1460 aa		4.28	□□□□□ -1.72
LDS2	YOL047C	TY3B-G	Q99315	1547 aa		4.27	□□□□□ -1.73
LDS2	YOL047C	HXK1	P04806	485 aa	Known RBP	4.27	□□□□□ -1.73
LDS2	YOL047C	RPS6A	P0CX37	236 aa	Known RBP	4.27	□□□□□ -1.73
LDS2	YOL047C	RPS6B	P0CX38	236 aa	Predicted RBP	4.27	□□□□□ -1.73
LDS2	YOL047C	YEF3	P16521	1044 aa	Known RBP	4.27	□□□□□ -1.73
LDS2	YOL047C	RPL8A	P17076	256 aa	Known RBP	4.27	□□□□□ -1.73
LDS2	YOL047C	PWP2	P25635	923 aa	Known RBP	4.27	□□□□□ -1.73
LDS2	YOL047C	VPS35	P34110	944 aa		4.27	□□□□□ -1.73
LDS2	YOL047C	CWH41	P53008	833 aa		4.27	□□□□□ -1.73
LDS2	YOL047C	UFD2	P54860	961 aa		4.27	□□□□□ -1.73
LDS2	YOL047C	CTR9	P89105	1077 aa		4.27	□□□□□ -1.73
LDS2	YOL047C	UTP13	Q05946	817 aa	Known RBP	4.27	□□□□□ -1.73
LDS2	YOL047C	PUS5	Q06244	254 aa		4.27	□□□□□ -1.73
LDS2	YOL047C	SLX4	Q12098	748 aa		4.27	□□□□□ -1.73
LDS2	YOL047C	NKP1	Q12493	238 aa		4.27	□□□□□ -1.73
LDS2	YOL047C	ESC1	Q03661	1658 aa	Known RBP	4.26	□□□□□ -1.73
LDS2	YOL047C	MOD5	P07884	428 aa		4.26	□□□□□ -1.73
LDS2	YOL047C	PCT1	P13259	424 aa		4.26	□□□□□ -1.73
LDS2	YOL047C	CDC34	P14682	295 aa		4.26	□□□□□ -1.73
LDS2	YOL047C	STE5	P32917	917 aa		4.26	□□□□□ -1.73
LDS2	YOL047C	DUT1	P33317	147 aa		4.26	□□□□□ -1.73
LDS2	YOL047C	YBR184W	P38299	523 aa		4.26	□□□□□ -1.73
LDS2	YOL047C	ACO2	P39533	789 aa		4.26	□□□□□ -1.73
LDS2	YOL047C	NOC2	P39744	710 aa	Known RBP	4.26	□□□□□ -1.73
LDS2	YOL047C	RPA14	P50106	137 aa		4.26	□□□□□ -1.73
LDS2	YOL047C	SAM37	P50110	327 aa		4.26	□□□□□ -1.73
LDS2	YOL047C	ALO1	P54783	526 aa	Known RBP	4.26	□□□□□ -1.73
LDS2	YOL047C	ATG13	Q06628	738 aa		4.26	□□□□□ -1.73
LDS2	YOL047C	NOC3	Q07896	663 aa	Predicted RBP	4.26	□□□□□ -1.73
LDS2	YOL047C	PIF1	P07271	859 aa		4.25	□□□□□ -1.73
LDS2	YOL047C	MSP1	P28737	362 aa		4.25	□□□□□ -1.73
LDS2	YOL047C	HIR1	P32479	840 aa		4.25	□□□□□ -1.73
LDS2	YOL047C	PAC1	P39946	494 aa	Known RBP	4.25	□□□□□ -1.73
LDS2	YOL047C	CHZ1	P40019	153 aa	Predicted RBP	4.25	□□□□□ -1.73
LDS2	YOL047C	YGR035C	P53222	116 aa		4.25	□□□□□ -1.73
LDS2	YOL047C	YNL011C	P53980	444 aa		4.25	□□□□□ -1.73
LDS2	YOL047C	CDC55	Q00362	526 aa		4.25	□□□□□ -1.73
LDS2	YOL047C	TFB2	Q02939	513 aa		4.25	□□□□□ -1.73
LDS2	YOL047C	ATG16	Q03818	150 aa		4.25	□□□□□ -1.73
LDS2	YOL047C	ESC2	Q06340	456 aa		4.25	□□□□□ -1.73
LDS2	YOL047C	APC11	Q12157	165 aa		4.25	□□□□□ -1.73
LDS2	YOL047C	RVB2	Q12464	471 aa	Known RBP	4.25	□□□□□ -1.73
LDS2	YOL047C	MPD2	Q99316	277 aa		4.25	□□□□□ -1.73
LDS2	YOL047C	PDC1	P06169	563 aa	Known RBP	4.24	□□□□□ -1.73
LDS2	YOL047C	SWI5	P08153	709 aa		4.24	□□□□□ -1.73
LDS2	YOL047C	PRE9	P23638	258 aa	Known RBP	4.24	□□□□□ -1.73
LDS2	YOL047C	UBP1	P25037	809 aa		4.24	□□□□□ -1.73
LDS2	YOL047C	MRC1	P25588	1096 aa		4.24	□□□□□ -1.73
LDS2	YOL047C	SFP1	P32432	683 aa		4.24	□□□□□ -1.73
LDS2	YOL047C	RPN12	P32496	274 aa		4.24	□□□□□ -1.73
LDS2	YOL047C	NGR1	P32831	672 aa	Known RBP	4.24	□□□□□ -1.73
LDS2	YOL047C	YKL222C	P35995	705 aa		4.24	□□□□□ -1.73
LDS2	YOL047C	FUN12	P39730	1002 aa	Known RBP	4.24	□□□□□ -1.73
LDS2	YOL047C	VID27	P40157	782 aa		4.24	□□□□□ -1.73
LDS2	YOL047C	KRI1	P42846	591 aa	Known RBP	4.24	□□□□□ -1.73
LDS2	YOL047C	MRPS18	P42847	217 aa		4.24	□□□□□ -1.73
LDS2	YOL047C	YFL034W	P43564	1073 aa		4.24	□□□□□ -1.73
LDS2	YOL047C	HLJ1	P48353	224 aa		4.24	□□□□□ -1.73
LDS2	YOL047C	YGR237C	P50089	785 aa		4.24	□□□□□ -1.73
LDS2	YOL047C	RTA1	P53047	317 aa		4.24	□□□□□ -1.73
LDS2	YOL047C	CWC22	P53333	577 aa	Known RBP	4.24	□□□□□ -1.73
LDS2	YOL047C	CEF1	Q03654	590 aa	Predicted RBP	4.24	□□□□□ -1.73
LDS2	YOL047C	PDS5	Q04264	1277 aa		4.24	□□□□□ -1.73
LDS2	YOL047C	INP54	Q08227	384 aa	Known RBP	4.24	□□□□□ -1.73
LDS2	YOL047C	LSP1	Q12230	341 aa	Known RBP	4.24	□□□□□ -1.73
LDS2	YOL047C	NUP157	P40064	1391 aa	Known RBP	4.24	□□□□□ -1.73
LDS2	YOL047C	ULS1	Q08562	1619 aa		4.24	□□□□□ -1.73
LDS2	YOL047C	TY3B-I	Q7LHG5	1498 aa	Known RBP	4.24	□□□□□ -1.73
LDS2	YOL047C	NUP145	P49687	1317 aa		4.23	□□□□□ -1.73
LDS2	YOL047C	DNF1	P32660	1571 aa		4.23	□□□□□ -1.73
LDS2	YOL047C	GDB1	Q06625	1536 aa		4.23	□□□□□ -1.73
LDS2	YOL047C	CIT1	P00890	479 aa		4.23	□□□□□ -1.73
LDS2	YOL047C	CAN1	P04817	590 aa		4.23	□□□□□ -1.73
LDS2	YOL047C	KNS1	P32350	737 aa	Predicted RBP	4.23	□□□□□ -1.73
LDS2	YOL047C	RPT2	P40327	437 aa	Known RBP	4.23	□□□□□ -1.73
LDS2	YOL047C	MSB3	P48566	633 aa	Predicted RBP	4.23	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 58.7 ms