RNA–Protein interactions for RNA: YNL172W

APC1, Transcript of Largest subunit of the Anaphase-Promoting Complex/Cyclosome, yeast

Gene APC1, Length 5,247 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APC1	YNL172W	YJL007C	P47080	104 aa		5.04	□□□□□ -1.6
APC1	YNL172W	COP1	P53622	1201 aa	Known RBP	5.04	□□□□□ -1.6
APC1	YNL172W	FUS1	P11710	512 aa		5.04	□□□□□ -1.6
APC1	YNL172W	JJJ3	P47138	172 aa		5.04	□□□□□ -1.6
APC1	YNL172W	ARG82	P07250	355 aa		5.03	□□□□□ -1.6
APC1	YNL172W	PSE1	P32337	1089 aa	Known RBP	5.03	□□□□□ -1.6
APC1	YNL172W	SGM1	P47166	707 aa		5.03	□□□□□ -1.6
APC1	YNL172W	CIT1	P00890	479 aa		5.03	□□□□□ -1.6
APC1	YNL172W	MAK16	P10962	306 aa	Predicted RBP	5.03	□□□□□ -1.6
APC1	YNL172W	DIT2	P21595	489 aa		5.03	□□□□□ -1.6
APC1	YNL172W	EUG1	P32474	517 aa		5.03	□□□□□ -1.6
APC1	YNL172W	EBP2	P36049	427 aa	Known RBP	5.03	□□□□□ -1.6
APC1	YNL172W	VTC2	P43585	828 aa		5.03	□□□□□ -1.6
APC1	YNL172W	CTH1	P47976	325 aa		5.03	□□□□□ -1.6
APC1	YNL172W	RPN8	Q08723	338 aa	Known RBP	5.03	□□□□□ -1.6
APC1	YNL172W	HVG1	P0CE11	249 aa		5.02	□□□□□ -1.61
APC1	YNL172W	PTC3	P34221	468 aa	Known RBP	5.02	□□□□□ -1.61
APC1	YNL172W	MET1	P36150	593 aa		5.02	□□□□□ -1.61
APC1	YNL172W	YKE2	P52553	114 aa		5.02	□□□□□ -1.61
APC1	YNL172W	NSE5	Q03718	556 aa		5.02	□□□□□ -1.61
APC1	YNL172W	TAH18	Q12181	623 aa		5.02	□□□□□ -1.61
APC1	YNL172W	DIP2	Q12220	943 aa	Predicted RBP	5.02	□□□□□ -1.61
APC1	YNL172W	ASH1	P34233	588 aa		5.02	□□□□□ -1.61
APC1	YNL172W	APC5	Q08683	685 aa		5.02	□□□□□ -1.61
APC1	YNL172W	PTK1	P36002	662 aa	Predicted RBP	5.02	□□□□□ -1.61
APC1	YNL172W	GGA2	P38817	585 aa	Known RBP	5.02	□□□□□ -1.61
APC1	YNL172W	GDE1	Q02979	1223 aa		5.02	□□□□□ -1.61
APC1	YNL172W	RRP5	Q05022	1729 aa	Known RBP	5.02	□□□□□ -1.61
APC1	YNL172W	KRE2	P27809	442 aa		5.02	□□□□□ -1.61
APC1	YNL172W	RPL8B	P29453	256 aa	Known RBP	5.02	□□□□□ -1.61
APC1	YNL172W	APN2	P38207	520 aa		5.02	□□□□□ -1.61
APC1	YNL172W	CIR1	P42940	261 aa		5.02	□□□□□ -1.61
APC1	YNL172W	YDL073W	Q07454	984 aa		5.02	□□□□□ -1.61
APC1	YNL172W	WRS1	Q12109	432 aa	Known RBP	5.02	□□□□□ -1.61
APC1	YNL172W	SEM1	O94742	89 aa		5.01	□□□□□ -1.61
APC1	YNL172W	SAH1	P39954	449 aa	Known RBP	5.01	□□□□□ -1.61
APC1	YNL172W	TIP41	Q12199	356 aa		5.01	□□□□□ -1.61
APC1	YNL172W	BRN1	P38170	754 aa		5.01	□□□□□ -1.61
APC1	YNL172W	RAD50	P12753	1312 aa		5.01	□□□□□ -1.61
APC1	YNL172W	PSK2	Q08217	1101 aa		5	□□□□□ -1.61
APC1	YNL172W	GYP5	Q12344	894 aa		5	□□□□□ -1.61
APC1	YNL172W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
APC1	YNL172W	UBP15	P50101	1230 aa		5	□□□□□ -1.61
APC1	YNL172W	YGL242C	P53066	181 aa		5	□□□□□ -1.61
APC1	YNL172W	SPN1	Q06505	410 aa	Predicted RBP	5	□□□□□ -1.61
APC1	YNL172W	TRP2	P00899	507 aa	Known RBP	5	□□□□□ -1.61
APC1	YNL172W	CDC48	P25694	835 aa	Known RBP	5	□□□□□ -1.61
APC1	YNL172W	BUD16	P39988	312 aa		5	□□□□□ -1.61
APC1	YNL172W	BI4	P03879	638 aa		5	□□□□□ -1.61
APC1	YNL172W	EAF7	P53911	425 aa	Known RBP	5	□□□□□ -1.61
APC1	YNL172W	VPS3	P23643	1011 aa		4.99	□□□□□ -1.61
APC1	YNL172W	NPA3	P47122	385 aa		4.99	□□□□□ -1.61
APC1	YNL172W	VPS4	P52917	437 aa		4.99	□□□□□ -1.61
APC1	YNL172W	GAS5	Q08193	484 aa		4.99	□□□□□ -1.61
APC1	YNL172W	FRS2	P15625	503 aa	Known RBP	4.99	□□□□□ -1.61
APC1	YNL172W	BUD6	P41697	788 aa		4.99	□□□□□ -1.61
APC1	YNL172W	YPL034W	Q03083	165 aa		4.99	□□□□□ -1.61
APC1	YNL172W	VIP1	Q06685	1146 aa	Known RBP	4.99	□□□□□ -1.61
APC1	YNL172W	GSY1	P23337	708 aa		4.99	□□□□□ -1.61
APC1	YNL172W	FIR1	P40020	876 aa		4.99	□□□□□ -1.61
APC1	YNL172W	SRT1	Q03175	343 aa		4.99	□□□□□ -1.61
APC1	YNL172W	POM152	P39685	1337 aa		4.99	□□□□□ -1.61
APC1	YNL172W	MSD1	P15179	658 aa	Known RBP	4.99	□□□□□ -1.61
APC1	YNL172W	MUM2	P38236	366 aa		4.99	□□□□□ -1.61
APC1	YNL172W	RFC1	P38630	861 aa	Known RBP	4.99	□□□□□ -1.61
APC1	YNL172W	VID27	P40157	782 aa		4.99	□□□□□ -1.61
APC1	YNL172W	INM2	Q05533	292 aa		4.99	□□□□□ -1.61
APC1	YNL172W	RRP14	P36080	434 aa	Known RBP	4.98	□□□□□ -1.61
APC1	YNL172W	PTK2	P47116	818 aa	Known RBP	4.98	□□□□□ -1.61
APC1	YNL172W	SHE10	P53075	577 aa		4.98	□□□□□ -1.61
APC1	YNL172W	NAF1	P53919	492 aa	Known RBP	4.98	□□□□□ -1.61
APC1	YNL172W	SLD5	Q03406	294 aa		4.98	□□□□□ -1.61
APC1	YNL172W	PUF6	Q04373	656 aa	Known RBP	4.98	□□□□□ -1.61
APC1	YNL172W	HCR1	Q05775	265 aa	Known RBP	4.98	□□□□□ -1.61
APC1	YNL172W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
APC1	YNL172W	OPI1	P21957	404 aa		4.98	□□□□□ -1.61
APC1	YNL172W	UFD2	P54860	961 aa		4.98	□□□□□ -1.61
APC1	YNL172W	PEX29	Q03370	554 aa		4.98	□□□□□ -1.61
APC1	YNL172W	MAL31	P38156	614 aa		4.98	□□□□□ -1.61
APC1	YNL172W	STS1	P38637	319 aa		4.98	□□□□□ -1.61
APC1	YNL172W	JHD1	P40034	492 aa		4.98	□□□□□ -1.61
APC1	YNL172W	YNL134C	P53912	376 aa	Known RBP	4.98	□□□□□ -1.61
APC1	YNL172W	ALD6	P54115	500 aa	Known RBP	4.98	□□□□□ -1.61
APC1	YNL172W	UBP16	Q02863	499 aa		4.98	□□□□□ -1.61
APC1	YNL172W	YML083C	Q04526	418 aa		4.98	□□□□□ -1.61
APC1	YNL172W	YCG1	Q06680	1035 aa		4.98	□□□□□ -1.61
APC1	YNL172W	PDC1	P06169	563 aa	Known RBP	4.97	□□□□□ -1.61
APC1	YNL172W	SNF7	P39929	240 aa	Known RBP	4.97	□□□□□ -1.61
APC1	YNL172W	UBP10	P53874	792 aa	Predicted RBP	4.97	□□□□□ -1.61
APC1	YNL172W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	4.97	□□□□□ -1.61	not detected
APC1	YNL172W	SWI1	P09547	1314 aa		4.97	□□□□□ -1.61
APC1	YNL172W	RAD53	P22216	821 aa		4.97	□□□□□ -1.61
APC1	YNL172W	ESC8	Q08119	714 aa		4.97	□□□□□ -1.61
APC1	YNL172W	LAP2	Q10740	671 aa		4.97	□□□□□ -1.61
APC1	YNL172W	CET1	O13297	549 aa	Predicted RBP	4.97	□□□□□ -1.61
APC1	YNL172W	VPS29	P38759	282 aa		4.97	□□□□□ -1.61
APC1	YNL172W	YNR014W	P53719	212 aa		4.97	□□□□□ -1.61
APC1	YNL172W	RAD61	Q99359	647 aa		4.97	□□□□□ -1.61
APC1	YNL172W	RNR2	P09938	399 aa	Known RBP	4.96	□□□□□ -1.61
APC1	YNL172W	VPH1	P32563	840 aa	Known RBP	4.96	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms