RNA–Protein interactions for RNA: YMR088C

VBA1, Transcript of Permease of basic amino acids in the vacuolar membrane, yeastyeast

Gene VBA1, Length 1,689 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VBA1YMR088C SSQ1Q05931 657 aaPredicted RBP6.12□□□□□ -1.43
VBA1YMR088C ARV1Q06541 321 aa6.12□□□□□ -1.43
VBA1YMR088C YPR097WQ06839 1073 aa6.12□□□□□ -1.43
VBA1YMR088C SLK19Q08581 821 aaKnown RBP6.12□□□□□ -1.43
VBA1YMR088C NAT1P12945 854 aaKnown RBP6.11□□□□□ -1.43
VBA1YMR088C SEC15P22224 910 aa6.11□□□□□ -1.43
VBA1YMR088C RAD16P31244 790 aa6.11□□□□□ -1.43
VBA1YMR088C OTU2P38747 307 aaKnown RBP6.11□□□□□ -1.43
VBA1YMR088C ERC1P38767 581 aa6.11□□□□□ -1.43
VBA1YMR088C SSZ1P38788 538 aaKnown RBP6.11□□□□□ -1.43
VBA1YMR088C YER034WP40022 185 aaKnown RBP6.11□□□□□ -1.43
VBA1YMR088C MET18P40469 1032 aa6.11□□□□□ -1.43
VBA1YMR088C YIR042CP40586 236 aa6.11□□□□□ -1.43
VBA1YMR088C RRN7P40992 514 aa6.11□□□□□ -1.43
VBA1YMR088C IOC3P43596 787 aa6.11□□□□□ -1.43
VBA1YMR088C RIM21P48565 533 aa6.11□□□□□ -1.43
VBA1YMR088C RSM28Q03430 361 aa6.11□□□□□ -1.43
VBA1YMR088C SXM1Q04175 944 aaKnown RBP6.11□□□□□ -1.43
VBA1YMR088C VPS20Q04272 221 aa6.11□□□□□ -1.43
VBA1YMR088C YMR111CQ04461 462 aaPredicted RBP6.11□□□□□ -1.43
VBA1YMR088C YRM1Q12340 786 aa6.11□□□□□ -1.43
VBA1YMR088C WHI5Q12416 295 aa6.11□□□□□ -1.43
VBA1YMR088C YIL002W-AQ3E7Z5 69 aa6.11□□□□□ -1.43
VBA1YMR088C CFT1Q06632 1357 aaKnown RBP6.11□□□□□ -1.43
VBA1YMR088C ENO1P00924 437 aaKnown RBP6.1□□□□□ -1.43
VBA1YMR088C TTI1P36097 1038 aa6.1□□□□□ -1.43
VBA1YMR088C BFR1P38934 470 aaKnown RBP RIP-Chip data6.1□□□□□ -1.43not detected
VBA1YMR088C RRP8P38961 392 aaKnown RBP6.1□□□□□ -1.43
VBA1YMR088C STM1P39015 273 aaKnown RBP6.1□□□□□ -1.43
VBA1YMR088C RTT105P40063 208 aa6.1□□□□□ -1.43
VBA1YMR088C RTT106P40161 455 aa6.1□□□□□ -1.43
VBA1YMR088C CST6P40535 587 aa6.1□□□□□ -1.43
VBA1YMR088C PXA1P41909 870 aa6.1□□□□□ -1.43
VBA1YMR088C SET2P46995 733 aaKnown RBP6.1□□□□□ -1.43
VBA1YMR088C TIM54P47045 478 aa6.1□□□□□ -1.43
VBA1YMR088C NNF1P47149 201 aa6.1□□□□□ -1.43
VBA1YMR088C RNH70P53331 553 aa6.1□□□□□ -1.43
VBA1YMR088C SVL3Q03088 825 aaKnown RBP6.1□□□□□ -1.43
VBA1YMR088C DBP9Q06218 594 aaKnown RBP6.1□□□□□ -1.43
VBA1YMR088C CPS1P27614 576 aa6.1□□□□□ -1.43
VBA1YMR088C ELM1P32801 640 aa6.1□□□□□ -1.43
VBA1YMR088C TBS1P38114 1094 aa6.1□□□□□ -1.43
VBA1YMR088C CIC1P38779 376 aaKnown RBP6.1□□□□□ -1.43
VBA1YMR088C FTR1P40088 404 aa6.1□□□□□ -1.43
VBA1YMR088C MPH1P40562 993 aa6.1□□□□□ -1.43
VBA1YMR088C RTC4P53850 401 aa6.1□□□□□ -1.43
VBA1YMR088C ITT1Q04638 464 aa6.1□□□□□ -1.43
VBA1YMR088C MRX10Q05648 414 aa6.1□□□□□ -1.43
VBA1YMR088C ALR1Q08269 859 aa6.1□□□□□ -1.43
VBA1YMR088C NOT3P06102 836 aaKnown RBP6.09□□□□□ -1.43
VBA1YMR088C HNM1P19807 563 aa6.09□□□□□ -1.43
VBA1YMR088C PAT1P25644 796 aaKnown RBP6.09□□□□□ -1.43
VBA1YMR088C HEM3P28789 327 aa6.09□□□□□ -1.43
VBA1YMR088C DPH5P32469 300 aaPredicted RBP6.09□□□□□ -1.43
VBA1YMR088C YRB1P41920 201 aaKnown RBP6.09□□□□□ -1.43
VBA1YMR088C RNH1Q04740 348 aa6.09□□□□□ -1.43
VBA1YMR088C ARR2Q06597 130 aa6.09□□□□□ -1.43
VBA1YMR088C IRC3Q06683 689 aa6.09□□□□□ -1.43
VBA1YMR088C CSR1Q06705 408 aaKnown RBP6.09□□□□□ -1.43
VBA1YMR088C YOR352WQ08816 343 aa6.09□□□□□ -1.43
VBA1YMR088C MCM16Q12262 181 aa6.09□□□□□ -1.43
VBA1YMR088C PDC1P06169 563 aaKnown RBP6.08□□□□□ -1.44
VBA1YMR088C TOP2P06786 1428 aaKnown RBP6.08□□□□□ -1.44
VBA1YMR088C GGA2P38817 585 aaKnown RBP6.08□□□□□ -1.44
VBA1YMR088C CWC21Q03375 135 aaKnown RBP6.08□□□□□ -1.44
VBA1YMR088C MTC5Q03897 1148 aa6.08□□□□□ -1.44
VBA1YMR088C MMS1Q06211 1407 aa6.08□□□□□ -1.44
VBA1YMR088C SPP382Q06411 708 aaPredicted RBP6.08□□□□□ -1.44
VBA1YMR088C YLH47Q06493 454 aa6.08□□□□□ -1.44
VBA1YMR088C YDL073WQ07454 984 aa6.08□□□□□ -1.44
VBA1YMR088C ISA1Q07821 250 aaPredicted RBP6.08□□□□□ -1.44
VBA1YMR088C SEN2P16658 377 aa6.07□□□□□ -1.44
VBA1YMR088C TPM1P17536 199 aaKnown RBP6.07□□□□□ -1.44
VBA1YMR088C SSD1P24276 1250 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
VBA1YMR088C DPB3P27344 201 aa6.07□□□□□ -1.44
VBA1YMR088C VPS24P36095 224 aaKnown RBP6.07□□□□□ -1.44
VBA1YMR088C OLA1P38219 394 aaKnown RBP6.07□□□□□ -1.44
VBA1YMR088C CIN4P39110 191 aa6.07□□□□□ -1.44
VBA1YMR088C MXR1P40029 184 aa6.07□□□□□ -1.44
VBA1YMR088C EFM5P53200 248 aaKnown RBP6.07□□□□□ -1.44
VBA1YMR088C ATG38Q05789 226 aaKnown RBP6.07□□□□□ -1.44
VBA1YMR088C NNT1Q05874 261 aa6.07□□□□□ -1.44
VBA1YMR088C YBL111CQ3E7Y5 667 aa6.07□□□□□ -1.44
VBA1YMR088C PMS1P14242 873 aa6.07□□□□□ -1.44
VBA1YMR088C STE11P23561 717 aa6.07□□□□□ -1.44
VBA1YMR088C KRR1P25586 316 aaPredicted RBP6.07□□□□□ -1.44
VBA1YMR088C RRP1P35178 278 aaPredicted RBP6.07□□□□□ -1.44
VBA1YMR088C SKI2P35207 1287 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
VBA1YMR088C RXT2P38255 430 aa6.07□□□□□ -1.44
VBA1YMR088C TCD1P38756 429 aa6.07□□□□□ -1.44
VBA1YMR088C KXD1P53158 218 aa6.07□□□□□ -1.44
VBA1YMR088C RPN4Q03465 531 aa6.07□□□□□ -1.44
VBA1YMR088C RRN11Q04712 507 aa6.07□□□□□ -1.44
VBA1YMR088C FUS2Q05670 677 aa6.07□□□□□ -1.44
VBA1YMR088C GRC3Q07845 632 aa6.07□□□□□ -1.44
VBA1YMR088C RIO1Q12196 484 aaKnown RBP6.07□□□□□ -1.44
VBA1YMR088C MRPL40P36534 297 aa6.06□□□□□ -1.44
VBA1YMR088C FUI1P38196 639 aa6.06□□□□□ -1.44
VBA1YMR088C SPC72P39723 622 aa6.06□□□□□ -1.44
VBA1YMR088C RIO2P40160 425 aaKnown RBP6.06□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms