RNA–Protein interactions for RNA: YFR037C

RSC8, Transcript of Component of the RSC chromatin remodeling complex, yeast

Gene RSC8, Length 1,674 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSC8	YFR037C	YPL260W	Q08977	551 aa		10.37	□□□□□ -0.75
RSC8	YFR037C	RAD61	Q99359	647 aa		10.37	□□□□□ -0.75
RSC8	YFR037C	ARG82	P07250	355 aa		10.36	□□□□□ -0.75
RSC8	YFR037C	CDC6	P09119	513 aa		10.36	□□□□□ -0.75
RSC8	YFR037C	MCM4	P30665	933 aa	Known RBP	10.36	□□□□□ -0.75
RSC8	YFR037C	ASF1	P32447	279 aa		10.36	□□□□□ -0.75
RSC8	YFR037C	SHC1	P39000	512 aa		10.36	□□□□□ -0.75
RSC8	YFR037C	GET3	Q12154	354 aa	Known RBP	10.36	□□□□□ -0.75
RSC8	YFR037C	YOR111W	Q99210	232 aa		10.36	□□□□□ -0.75
RSC8	YFR037C	RPS9B	P05755	195 aa	Known RBP	10.35	□□□□□ -0.75
RSC8	YFR037C	RNR3	P21672	869 aa	Known RBP	10.35	□□□□□ -0.75
RSC8	YFR037C	RIT1	P23796	513 aa		10.35	□□□□□ -0.75
RSC8	YFR037C	RXT2	P38255	430 aa		10.35	□□□□□ -0.75
RSC8	YFR037C	VID27	P40157	782 aa		10.35	□□□□□ -0.75
RSC8	YFR037C	CSM2	P40465	213 aa		10.35	□□□□□ -0.75
RSC8	YFR037C	GSC2	P40989	1895 aa		10.35	□□□□□ -0.75
RSC8	YFR037C	APL6	P46682	809 aa		10.35	□□□□□ -0.75
RSC8	YFR037C	NSG2	P53898	299 aa		10.35	□□□□□ -0.75
RSC8	YFR037C	GDE1	Q02979	1223 aa		10.35	□□□□□ -0.75
RSC8	YFR037C	VMS1	Q04311	632 aa	Known RBP	10.35	□□□□□ -0.75
RSC8	YFR037C	MYO5	Q04439	1219 aa	Known RBP	10.35	□□□□□ -0.75
RSC8	YFR037C	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	10.35	□□□□□ -0.75	not detected
RSC8	YFR037C	RPL22A	P05749	121 aa	Known RBP	10.34	□□□□□ -0.75
RSC8	YFR037C	SES1	P07284	462 aa	Known RBP	10.34	□□□□□ -0.75
RSC8	YFR037C	VPS1	P21576	704 aa	Known RBP	10.34	□□□□□ -0.75
RSC8	YFR037C	PRP42	Q03776	544 aa	Known RBP	10.34	□□□□□ -0.75
RSC8	YFR037C	GSY2	P27472	705 aa		10.34	□□□□□ -0.75
RSC8	YFR037C	URA1	P28272	314 aa	Predicted RBP	10.34	□□□□□ -0.75
RSC8	YFR037C	PRO3	P32263	286 aa	Known RBP	10.34	□□□□□ -0.75
RSC8	YFR037C	MYO1	P08964	1928 aa		10.34	□□□□□ -0.75
RSC8	YFR037C	SRP40	P32583	406 aa	Predicted RBP	10.33	□□□□□ -0.76
RSC8	YFR037C	FYV10	P40492	516 aa		10.33	□□□□□ -0.76
RSC8	YFR037C	PCI8	P40512	444 aa		10.33	□□□□□ -0.76
RSC8	YFR037C	GSM1	P42950	618 aa		10.33	□□□□□ -0.76
RSC8	YFR037C	CUE3	P53137	624 aa	Known RBP	10.33	□□□□□ -0.76
RSC8	YFR037C	ATG20	Q07528	640 aa		10.33	□□□□□ -0.76
RSC8	YFR037C	GAS5	Q08193	484 aa		10.33	□□□□□ -0.76
RSC8	YFR037C	SLI15	P38283	698 aa		10.32	□□□□□ -0.76
RSC8	YFR037C	TIF4632	P39936	914 aa	Known RBP	10.32	□□□□□ -0.76
RSC8	YFR037C	PUS6	P53294	404 aa		10.32	□□□□□ -0.76
RSC8	YFR037C	DIP2	Q12220	943 aa	Predicted RBP	10.32	□□□□□ -0.76
RSC8	YFR037C	CYC8	P14922	966 aa		10.31	□□□□□ -0.76
RSC8	YFR037C	TIM50	Q02776	476 aa		10.31	□□□□□ -0.76
RSC8	YFR037C	HOS3	Q02959	697 aa	Known RBP	10.31	□□□□□ -0.76
RSC8	YFR037C	MCM3	P24279	971 aa	Known RBP	10.31	□□□□□ -0.76
RSC8	YFR037C	RPS7A	P26786	190 aa	Known RBP	10.31	□□□□□ -0.76
RSC8	YFR037C	NAF1	P53919	492 aa	Known RBP	10.31	□□□□□ -0.76
RSC8	YFR037C	RPT6	Q01939	405 aa	Known RBP	10.31	□□□□□ -0.76
RSC8	YFR037C	DPL1	Q05567	589 aa		10.31	□□□□□ -0.76
RSC8	YFR037C	CSC1	Q06538	782 aa		10.31	□□□□□ -0.76
RSC8	YFR037C	ACK1	Q07622	623 aa	Predicted RBP	10.31	□□□□□ -0.76
RSC8	YFR037C	CEX1	Q12453	761 aa		10.31	□□□□□ -0.76
RSC8	YFR037C	FLO11	P08640	1367 aa		10.31	□□□□□ -0.76
RSC8	YFR037C	STU2	P46675	888 aa		10.3	□□□□□ -0.76
RSC8	YFR037C	WAR1	Q03631	944 aa		10.3	□□□□□ -0.76
RSC8	YFR037C	YDR341C	Q05506	607 aa	Known RBP	10.3	□□□□□ -0.76
RSC8	YFR037C	KEL3	Q08979	651 aa	Predicted RBP	10.3	□□□□□ -0.76
RSC8	YFR037C	MET6	P05694	767 aa	Known RBP	10.29	□□□□□ -0.76
RSC8	YFR037C	VPS8	P39702	1274 aa		10.29	□□□□□ -0.76
RSC8	YFR037C	NOC2	P39744	710 aa	Known RBP	10.29	□□□□□ -0.76
RSC8	YFR037C	RAD26	P40352	1085 aa		10.29	□□□□□ -0.76
RSC8	YFR037C	TFC8	Q12308	588 aa		10.29	□□□□□ -0.76
RSC8	YFR037C	PTC5	Q12511	572 aa		10.29	□□□□□ -0.76
RSC8	YFR037C	NBL1	Q3E7Y6	73 aa		10.29	□□□□□ -0.76
RSC8	YFR037C	BMH1	P29311	267 aa	Known RBP	10.28	□□□□□ -0.76
RSC8	YFR037C	TCD1	P38756	429 aa		10.28	□□□□□ -0.76
RSC8	YFR037C	TFG2	P41896	400 aa	Predicted RBP	10.28	□□□□□ -0.76
RSC8	YFR037C	YGL138C	P53122	345 aa		10.28	□□□□□ -0.76
RSC8	YFR037C	MMR1	Q06324	491 aa		10.28	□□□□□ -0.76
RSC8	YFR037C	RRG1	Q12167	365 aa	Predicted RBP	10.28	□□□□□ -0.76
RSC8	YFR037C	ALG1	P16661	449 aa		10.27	□□□□□ -0.77
RSC8	YFR037C	MSM1	P22438	575 aa		10.27	□□□□□ -0.77
RSC8	YFR037C	RPL8B	P29453	256 aa	Known RBP	10.27	□□□□□ -0.77
RSC8	YFR037C	TIP41	Q12199	356 aa		10.27	□□□□□ -0.77
RSC8	YFR037C	CLF1	Q12309	687 aa	Predicted RBP	10.27	□□□□□ -0.77
RSC8	YFR037C	CIT1	P00890	479 aa		10.26	□□□□□ -0.77
RSC8	YFR037C	PSY4	P38193	441 aa		10.26	□□□□□ -0.77
RSC8	YFR037C	TOM71	P38825	639 aa	Known RBP	10.26	□□□□□ -0.77
RSC8	YFR037C	EIS1	Q05050	843 aa	Known RBP	10.26	□□□□□ -0.77
RSC8	YFR037C	YOR296W	Q08748	1289 aa		10.26	□□□□□ -0.77
RSC8	YFR037C	LTV1	P34078	463 aa		10.25	□□□□□ -0.77
RSC8	YFR037C	RTC4	P53850	401 aa		10.25	□□□□□ -0.77
RSC8	YFR037C	PUS5	Q06244	254 aa		10.25	□□□□□ -0.77
RSC8	YFR037C	THS1	P04801	734 aa	Known RBP	10.25	□□□□□ -0.77
RSC8	YFR037C	STI1	P15705	589 aa	Known RBP RIP-Chip data	10.25	□□□□□ -0.77	not detected
RSC8	YFR037C	SRP54	P20424	541 aa	Known RBP	10.25	□□□□□ -0.77
RSC8	YFR037C	PRE8	P23639	250 aa		10.25	□□□□□ -0.77
RSC8	YFR037C	SAC6	P32599	642 aa	Known RBP	10.25	□□□□□ -0.77
RSC8	YFR037C	CIN4	P39110	191 aa		10.25	□□□□□ -0.77
RSC8	YFR037C	LYS14	P40971	790 aa		10.25	□□□□□ -0.77
RSC8	YFR037C	GIS4	Q04233	774 aa		10.25	□□□□□ -0.77
RSC8	YFR037C	DSE3	Q08729	430 aa		10.25	□□□□□ -0.77
RSC8	YFR037C	HIS4	P00815	799 aa	Known RBP	10.24	□□□□□ -0.77
RSC8	YFR037C	MAK11	P20484	414 aa	Known RBP	10.24	□□□□□ -0.77
RSC8	YFR037C	SRM1	P21827	482 aa		10.24	□□□□□ -0.77
RSC8	YFR037C	SMC3	P47037	1230 aa		10.24	□□□□□ -0.77
RSC8	YFR037C	PEX21	P50091	288 aa		10.24	□□□□□ -0.77
RSC8	YFR037C	VPS30	Q02948	557 aa		10.24	□□□□□ -0.77
RSC8	YFR037C	SKG3	Q06315	1026 aa		10.24	□□□□□ -0.77
RSC8	YFR037C	TMA16	Q08687	178 aa		10.24	□□□□□ -0.77

Retrieved 100 of 5,963 RNA–protein pairs in 61.3 ms